Shoudong Bi

ORCID: 0000-0002-1113-0105
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About
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Research Areas
  • Insect-Plant Interactions and Control
  • Dengue and Mosquito Control Research
  • Forest, Soil, and Plant Ecology in China
  • Plant and animal studies
  • RNA and protein synthesis mechanisms
  • Insect and Pesticide Research
  • Remote Sensing and Land Use
  • Machine Learning in Bioinformatics
  • Plant Parasitism and Resistance
  • Viral Infections and Vectors
  • Insect and Arachnid Ecology and Behavior
  • Genomics and Phylogenetic Studies
  • Species Distribution and Climate Change
  • Advanced Decision-Making Techniques
  • Phytoplasmas and Hemiptera pathogens
  • Fish Ecology and Management Studies
  • Insect Pheromone Research and Control
  • RNA modifications and cancer
  • Orthoptera Research and Taxonomy
  • Remote Sensing in Agriculture
  • Neurobiology and Insect Physiology Research
  • Forest Insect Ecology and Management
  • Plant Ecology and Soil Science
  • Allelopathy and phytotoxic interactions
  • Botany and Plant Ecology Studies

Anhui Agricultural University
2016-2025

Ministry of Agriculture and Rural Affairs
2022

Weatherford College
2021

University of New Caledonia
2010

N6-methyladenosine (m6A) modification, as one of the commonest post-transcription modifications in RNAs, has been reported to be highly related many biological processes. Over past decade, several tools for m6A sites prediction Saccharomyces cerevisiae have developed and are freely available online. However, quality predictions by these is difficult quantify compare. In this study, an independent dataset M6Atest6540 was compiled systematically evaluate nine publicly S. cerevisiae. The...

10.1093/bfgp/elz018 article EN Briefings in Functional Genomics 2019-07-16

Estimates of aboveground biomass (AGB) in forests and the associated uncertainty are important pieces information outlined United Nations Framework Convention on Climate Change. Traditional integrated surveying methods require high inputs manpower material resources, whereas remote sensing technology can be used to improve efficiency forest resources at a lower measurement cost. Previous studies have primarily utilized spectral textural features as main modeling factors for AGB prediction...

10.1016/j.ecolind.2022.109246 article EN cc-by Ecological Indicators 2022-08-02

As one of the most common post-transcriptional modifications (PTCM) in RNA, 5-cytosine-methylation plays important roles many biological functions such as RNA metabolism and cell fate decision. Through accurate identification 5-methylcytosine (m5C) sites on researchers can better understand exact role these functions. In recent years, computational methods predicting m5C have attracted lots interests because its efficiency low-cost. However, both accuracy are not satisfactory yet need...

10.1186/s12859-020-03828-4 article EN cc-by BMC Bioinformatics 2020-10-30

As one of the most important posttranslational modifications (PTMs), protein lysine glycation changes characteristics proteins and leads to dysfunction proteins, which may cause diseases. Accurately detecting sites is great benefit for understanding biological function potential mechanism in treatment However, experimental methods are expensive time-consuming site identification. Instead, computational methods, with their higher efficiency lower cost, could be an supplement methods. In this...

10.3389/fbinf.2022.834153 article EN cc-by Frontiers in Bioinformatics 2022-02-18

Abstract To improve the prediction accuracy of Dendrolimus punctatus larvae overwintering, first and second generation to provide a scientific basis for effective prevention control D. , six mathematical models fuzzy comprehensive evaluation method were used predict accumulative amount with data 1989–2014. The cumulative overwintering was predicted in 2015, 2016, 2017, 2018. forecasted results all level 1, which consistent actual results. Five 1. 1 models'

10.1111/1748-5967.12753 article EN Entomological Research 2024-07-01

Insect pests reduce yield and cause economic losses, which are major problems in agriculture. Parasitic wasps the natural enemies of many agricultural thus have been widely used as biological control agents. Plants, phytophagous insects parasitic form a tritrophic food chain. Understanding interactions this system should be helpful for developing pest deciphering mechanisms parasitism. However, genomic resources not well organized. Here, we describe WaspBase, new database that contains 573...

10.1093/database/bay081 article EN cc-by Database 2018-01-01

The Mount Huang eastern honey bees (Apis cerana) are an endemic population, which is well adapted to the local agricultural and ecological environment. In this study, genetic structure of seven (A. populations from in China were analyzed by SSR (simple sequence repeat) markers. results revealed that 16 pairs primers used amplified a total 143 alleles. number alleles per locus ranged 6 13, with mean value 8.94 locus. Observed expected heterozygosities showed values 0.446 0.831 respectively....

10.1186/s41065-016-0010-4 article EN cc-by Hereditas 2016-07-06

N6-methyladenosine (m6A) is one of the most important RNA modifications, which involved in many biological activities. Computational methods have been developed to detect m6A sites due their high efficiency and low costs. As widely utilized model organisms, for predicting Saccharomyces cerevisiae. However, generalization these was hampered by limited size benchmark datasets. On other hand, over 60,000 resolution more than 10,000 base cerevisiae are recorded RMBase m6A-Atlas, respectively....

10.3389/fmicb.2022.999506 article EN cc-by Frontiers in Microbiology 2022-10-05

Empoasca onukii Matsuda is an important pest widely distributed in tea areas China, which greatly affects production and quality. The long-term use of chemical control measures will cause environmental pollution. To better utilize wandering spiders that have strong competitive effects on the predation E. onukii, we conducted a path analysis between populations 3 plantations 2020 2021. spider species had greatest direct indirect population were analyzed by magnitude coefficient. Then, gray...

10.1093/ee/nvad096 article EN Environmental Entomology 2023-10-12

Abstract To improve the accuracy of forecasting peak occurrence Dendrolimus punctatus Walker, we here used Bayes discriminant analysis to predict this for first and second generation larvae based on these data from 1983 2016 in Qianshan County, Anhui Province. Our present results showed that equation was as follows: f (1) = −3.2588‐6.2700 x 1 + 1.2870 2 0.7920 3 0.4152 4 ; (2) −14.5215‐8.5710 2.9790 2.0280 0.5031 (3) −3.5264; (4) −66.8312‐12.5216 5.1740 4.7162 0.6033 . And prediction 97.22%....

10.1111/1748-5967.12458 article EN Entomological Research 2020-06-24

Abstract The purpose of this study was to comprehensively evaluate the dominant natural enemies Breuipalpus oboyats in autumn and winter tea gardens. relationship between B.oboyats time space studied by niche analysis geostatistics combined with angular cosine coefficient method. According comparison sum closeness index, it is found that top three (from large small) are most closely related “Nongkangzao” garden Plexippus paykulli , Clubiona japonicola Xysticus ephippiafus ; “Pingyangtezao”...

10.1111/1748-5967.12558 article EN Entomological Research 2021-12-01

Abstract Honey bees (Apis cerana Fabricius) were collected from 195 colonies at seven different localities spanning the main beekeeping areas in Huangshan. Morphometric methods used to measure standard morphometric characters, and these compared samples Henan, Shandong, Yunnan provinces. Principal component analysis of total Huangshan database yielded two clusters: Jinxian Jixixian, those other localities. Within latter cluster, discriminant hierarchical cluster analyses revealed overlapping...

10.2478/jas-2013-0022 article EN cc-by Journal of Apicultural Science 2013-12-01

Tea is one of the most popular non-alcoholic beverages consumed worldwide. Numerous bioactive constituents tea were confirmed to possess healthy benefits via mechanisms regulating gene expressions or protein activities. However, a complete interacting profile between compounds (TBCs) and their target genes lacking, which put an obstacle in study function tea. To fill this gap, we developed database TBCs (TBC2target, http://camellia.ahau.edu.cn/TBC2target) based on pharmacophore mapping...

10.3389/fpls.2018.00211 article EN cc-by Frontiers in Plant Science 2018-02-22

Abstract In order to reasonably protect and utilize natural enemies for comprehensive control of Frankliniella intonsa , a systematic investigation was conducted on F. in tea gardens Hefei, Anhui Province, the spatial following effect studied. The semi‐variogram thrips obtained by geostatistics method, correlation degree between them analyzed grey analysis method. higher closer relationship was. this study, we 11 from October 28, 2020 November 20, August 22, 2021 19, 2021. top five with...

10.1111/1748-5967.12608 article EN Entomological Research 2022-08-01

Abstract Background: As one of the most common post-transcriptional modifications (PTCM) in RNA, 5-cytosine-methylation plays important roles many biological functions such as RNA metabolism and cell fate decision. Through accurate identification 5-methylcytosine (m5C) sites on researchers can better understand exact role these functions. In recent years, computational methods predicting m5C have attracted lots interests because its efficiency low-cost. However, both accuracy are not...

10.21203/rs.3.rs-39526/v3 preprint EN cc-by Research Square (Research Square) 2020-10-22

Abstract Our aim was to study the close relationship between number of Empoasca onukii and its natural enemies in tea plantations provide a scientific basis for control E. . The main Hefei, China, were compared by gray relational analysis, then relationships seven meteorological factors populations analyzed method path analysis. results showed that among top six most closely related population , two same three years four any study, enemy species varied greatly years. direct effect monthly...

10.1111/1748-5967.12662 article EN Entomological Research 2023-07-01

Abstract In order to clarify the prediction accuracy of eight models for predicting peak occurrence first generation larvae Dendrolimus punctatus and provide basis pest control, a catastrophe model was established based on in Qianshan City, Anhui Province from 1983 2016, compared with other seven models. Comparing forecasting results 2015 2016 actual value taking 1 head/plant as error standard, errors multiple regression six factors independent variables, namely, pupae overwintering...

10.1111/1748-5967.12707 article EN Entomological Research 2024-02-01
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