Patrícia Dayane Carvalho Schaker

ORCID: 0000-0002-1215-9735
Publications
Citations
Views
---
Saved
---
About
Contact & Profiles
Research Areas
  • Biofuel production and bioconversion
  • Sugarcane Cultivation and Processing
  • Genomics and Phylogenetic Studies
  • Plant Disease Resistance and Genetics
  • Aquatic Ecosystems and Phytoplankton Dynamics
  • Evolution and Paleontology Studies
  • Growth and nutrition in plants
  • Microbial Community Ecology and Physiology
  • Fermentation and Sensory Analysis
  • Plant Pathogens and Fungal Diseases
  • Marine Toxins and Detection Methods
  • Enzyme Production and Characterization
  • Fungal and yeast genetics research
  • Berry genetics and cultivation research
  • Plant-Microbe Interactions and Immunity
  • Banana Cultivation and Research
  • Aluminum toxicity and tolerance in plants and animals
  • Plant Gene Expression Analysis
  • Enzyme-mediated dye degradation
  • Horticultural and Viticultural Research
  • Molecular Biology Techniques and Applications
  • Bone and Dental Protein Studies
  • Plant Stress Responses and Tolerance
  • Environmental Toxicology and Ecotoxicology
  • Microbial Metabolism and Applications

Universidade Tecnológica Federal do Paraná
2021-2025

Universidade de São Paulo
2013-2020

Universidade Federal de Minas Gerais
2019

Pontifícia Universidade Católica do Paraná
2019

Weatherford College
2019

Brazilian Agricultural Research Corporation
2011-2016

AgroBio
2013

Sporisorium scitamineum is a biotrophic fungus responsible for the sugarcane smut, worldwide spread disease. This study provides complete sequence of individual chromosomes S. from telomere to achieved by combination PacBio long reads and Illumina short data, as well draft second fungal strain. Comparative analysis previous available sequences another strain detected few polymorphisms among three genomes. The novel described herein allowed us identify annotate extended subtelomeric regions,...

10.1371/journal.pone.0129318 article EN cc-by PLoS ONE 2015-06-12

The Cylindrospermopsis raciborskii population from Brazilian freshwater is known to produce saxitoxin derivatives (STX), while cylindrospermopsin (CYN), which commonly detected in isolates Australia and Asia continents, has thus far not been South American strains. However, during the investigation for presence of cyrA, cyrB, cyrC cyrJ CYN synthetase genes genomes four laboratory-cultured C. strains, almost complete cyrA gene sequences were obtained all cyrB fragments observed two These...

10.1371/journal.pone.0074238 article EN cc-by PLoS ONE 2013-08-28

The purpose of this work was to study a rapid yeast DNA extraction by boiling and freeze-thawing processes without using chemical reagents or any purification procedures, obtain high grade PCR-product. A specific fragment the 18S region Dekkera bruxellensis Saccharomyces cerevisiae chosen. described protocols generated PCR-grade product preparations could be used process many samples. amplification fragments observed after 30 35 cycles. These kind reagents, especial water, procedures proved...

10.1590/s1516-89132012000200020 article EN cc-by-nc Brazilian Archives of Biology and Technology 2012-04-01

Sugarcane smut disease is caused by the biotrophic fungus Sporisorium scitamineum. The characterized development of a whip-like structure from primary meristems, where billions teliospores are produced. also causes tillering and low sucrose high fiber contents, reducing cane productivity. We investigated biological events contributing to symptoms in intermediate-resistant sugarcane genotype examining transcriptional profiles (RNAseq) shortly after inoculating plants immediately whip...

10.1371/journal.pone.0162237 article EN cc-by PLoS ONE 2016-09-01

Sugarcane smut disease, caused by the biotrophic fungus Sporisorium scitamineum, is characterized development of a whip-like structure from plant meristem. The disease causes negative effects on sucrose accumulation, fiber content and juice quality. aim this study was to exam whether transcriptomic changes already described during infection sugarcane S. scitamineum result in at metabolomic level. To address question, an analysis conducted initial stage interaction through progression...

10.3389/fpls.2017.00882 article EN cc-by Frontiers in Plant Science 2017-05-31

Cylindrospermopsis raciborskii is a freshwater cyanobacterial species with increasing bloom reports worldwide that are likely due to factors related climate change. In addition the deleterious effects of blooms on aquatic ecosystems, majority ecotypes can synthesize toxic secondary metabolites causing public health issues. To overcome harmful C. blooms, it important advance knowledge diversity, genetic variation, and evolutionary processes within populations. An efficient approach exploring...

10.3389/fmicb.2018.00306 article EN cc-by Frontiers in Microbiology 2018-02-26

Alternative splicing (AS) promotes transcriptome and proteome diversity during growth, development, stress responses in eukaryotes. Genome-wide studies of AS sugarcane (Saccharum spp.) are lacking, mainly due to the absence a high-quality sequenced reference genome, sugarcane's large, complex variable chromosome numbers polyploidy cultivars. Here, we analyzed changes isoform-level landscape infection with smut fungus (Sporisorium scitamineum) using hybrid approach involving Sorghum bicolor...

10.1038/s41598-019-45184-1 article EN cc-by Scientific Reports 2019-06-20

Sporisorium scitamineum is a biotrophic fungus causing sugarcane smut disease. In this study, we set up pipeline and used genomic dual transcriptomic data previously obtained by our group to identify candidate effectors of S. their expression profiles in infected smut-resistant susceptible plants. The profile different genes after infection contrasting genotypes assessed RT-qPCR depended on the plant disease progression. Three effector expressed earlier only resistant plants, four both...

10.3390/jof6040339 article EN cc-by Journal of Fungi 2020-12-04

Microcystis aeruginosa strain SPC777 is an important toxin-producing cyanobacterium, isolated from a water bloom of the Billings reservoir (São Paulo State, Brazil). Here, we report draft genome sequence and initial findings preliminary analysis SPC777, including several gene clusters involved in nonribosomal ribosomal synthesis secondary metabolites.

10.1128/genomea.00547-13 article EN Genome Announcements 2013-08-02

O recente interesse pelo consumo de amoras-pretas ( Rubus spp .) associado a adaptacao da cultura algumas regioes do pais, tem proporcionado ampliacao area producao fruto, principalmente no Estado Rio Grande Sul e em outras com condicoes climaticas semelhantes. Os frutos, coloracao negra sabor acido doce-acido, sao ricos compostos nutraceuticos , podendo ser destinados tanto ao in natura quanto processo industrial, como o preparo suco, polpa, geleia doces. Quando necessitam, entanto,...

10.18539/cast.v15i1-4.1980 article PT Current Agricultural Science and Technology 2009-01-01

<title>Abstract</title> Efficient degradation of lignocellulosic biomass is key for the production value-added products, contributing to sustainable and renewable solutions. This study employs a two-step approach evaluate lignocellulolytic enzymes <italic>Ceratocystis paradoxa</italic>, <italic>Colletotrichum falcatum</italic>, <italic>Sporisorium scitamineum</italic>. First, an <italic>in silico</italic> genomic analysis was conducted predict potential enzyme groups produced by these fungi....

10.21203/rs.3.rs-5363050/v1 preprint EN cc-by Research Square (Research Square) 2024-11-13

<title>Abstract</title> <italic>Kalanchoe daigremontiana</italic> is valued for its antioxidant and antimicrobial properties, mainly due to bioactive compounds like phenolic acids, including ferulic acid. Endophytic fungi can act as elicitors in tissue culture, enhancing compound production, promoting growth, improving microbial control. This study aims evaluate the profile, growth promotion, antibacterial activity of <italic>K. plantlets grown <italic>in vitro</italic> a culture medium...

10.21203/rs.3.rs-5147333/v1 preprint EN cc-by Research Square (Research Square) 2024-11-22

The indiscriminate use of pesticides on grape crops is harmful for consumers´ healthin “in natura” consumption and in the ingestion wine juice. During winemaking, a rapid efficient fermentation stage critical to avoid proliferation contaminating microorganisms guarantee product´s quality. Polymerase chain reaction (PCR) has advantage detecting these contaminants early stages fermentation. However,this enzymatic may also be susceptible specific problems, reducing its efficiency. Agricultural...

10.1590/1678-4324-2016160241 article EN cc-by-nc Brazilian Archives of Biology and Technology 2016-01-01

The aim of this work was to study the production functional protein in yeast culture. cells Saccharomyces cerevisiae Embrapa 1B (K+R+) killed a strain 26B (K-R-)in grape must and YEPD media. lethal effect toxin-containing supernatant aeration upon killer correlation between products anaerobic metabolism toxin formation were evaluated. results showed that at low sugar concentration, Sacch. only produced under conditions . system be regulated by Pasteur Crabtree effects. As soon as ethanol...

10.1590/s1516-89132011000300022 article EN cc-by-nc Brazilian Archives of Biology and Technology 2011-06-01

Abstract Background The white-eared opossum ( Didelphis albiventris ) is widely distributed throughout Brazil and South America. It has been used as an animal model for studying different scientific questions ranging from the restoration of degraded green areas to medical aspects Chagas disease, leishmaniasis resistance against snake venom. As a marsupial, D. can also contribute understanding molecular mechanisms that govern stages organogenesis. Opossum joeys are born after only 13 days,...

10.1186/s12864-019-6240-x article EN cc-by BMC Genomics 2019-11-15

Abstract Background The white-eared opossum (Didelphis albiventris) is widely distributed throughout Brazil and South America. They have been used as animal models to study different aspects in science, from the restoration of degraded green areas medical Chagas disease, leishmaniasis resistance against snake venom. As a marsupial, D. albiventris can also aid comprehension molecular mechanisms that govern stages organogenesis, their joeys are born after only 13 days, depending on...

10.21203/rs.2.12871/v1 preprint EN cc-by Research Square (Research Square) 2019-08-14

Abstract BackgroundThe white-eared opossum (Didelphis albiventris) is widely distributed throughout Brazil and South America. It has been used as an animal model for studying different scientific questions ranging from the restoration of degraded green areas to medical aspects Chagas disease, leishmaniasis resistance against snake venom. As a marsupial, D. albiventris can also contribute understanding molecular mechanisms that govern stages organogenesis. Opossum joeys are born after only 13...

10.21203/rs.2.12871/v3 preprint EN cc-by Research Square (Research Square) 2019-11-01

Abstract BackgroundThe white-eared opossum (Didelphis albiventris) is widely distributed throughout Brazil and South America. It has been used as an animal model for studying different scientific questions ranging from the restoration of degraded green areas to medical aspects Chagas disease, leishmaniasis resistance against snake venom. As a marsupial, D. albiventris can also contribute understanding molecular mechanisms that govern stages organogenesis. Opossum joeys are born after only 13...

10.21203/rs.2.12871/v2 preprint EN cc-by Research Square (Research Square) 2019-10-25
Coming Soon ...