Sze Chern Lim

ORCID: 0000-0003-0312-9937
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About
Contact & Profiles
Research Areas
  • Mitochondrial Function and Pathology
  • RNA modifications and cancer
  • Metabolism and Genetic Disorders
  • ATP Synthase and ATPases Research
  • Genomics and Rare Diseases
  • Genetics and Neurodevelopmental Disorders
  • Metalloenzymes and iron-sulfur proteins
  • Ubiquitin and proteasome pathways
  • Genomic variations and chromosomal abnormalities
  • Peroxisome Proliferator-Activated Receptors
  • Congenital heart defects research
  • Neurogenetic and Muscular Disorders Research
  • Genetic Syndromes and Imprinting
  • CRISPR and Genetic Engineering
  • Cellular transport and secretion
  • Cancer-related molecular mechanisms research
  • MicroRNA in disease regulation
  • Genomics and Phylogenetic Studies
  • Neuroscience and Neuropharmacology Research
  • RNA and protein synthesis mechanisms
  • Peptidase Inhibition and Analysis
  • RNA Research and Splicing
  • Glycosylation and Glycoproteins Research

Murdoch Children's Research Institute
2012-2022

Victorian Clinical Genetics Services
2020-2022

Juntendo University
2019-2022

Hudson Institute of Medical Research
2014-2021

The University of Melbourne
2010-2014

Royal Children's Hospital
2010-2014

Monash Institute of Medical Research
2014

Monash University
2014

Applying next-generation sequencing to 42 infants with mitochondrial disease highlights both the potential and challenge of using this technology in clinical diagnosis.

10.1126/scitranslmed.3003310 article EN Science Translational Medicine 2012-01-25

Iron–sulfur clusters (ISCs) are important prosthetic groups that define the functions of many proteins. Proteins with ISCs (called iron–sulfur or Fe–S proteins) present in mitochondria, cytosol, endoplasmic reticulum and nucleus. They participate various biological pathways including oxidative phosphorylation (OXPHOS), citric acid cycle, iron homeostasis, heme biosynthesis DNA repair. Here, we report a homozygous mutation LYRM4 two patients combined OXPHOS deficiency. encodes ISD11 protein,...

10.1093/hmg/ddt295 article EN Human Molecular Genetics 2013-06-28

Abstract Medium-chain acyl-Coenzyme A dehydrogenase (MCAD) is involved in the initial step of mitochondrial fatty acid β-oxidation (FAO). Loss function results MCAD deficiency, a disorder that usually presents childhood with hypoketotic hypoglycemia, vomiting and lethargy. While disruption metabolism primary metabolic defect, secondary defects oxidative phosphorylation (OXPHOS) may also contribute to disease pathogenesis. Therefore, we examined OXPHOS activity stability MCAD-deficient...

10.1038/s41598-017-18530-4 article EN cc-by Scientific Reports 2018-01-03

Mitochondrial complex I (NADH:ubiquinone oxidoreductase) must be assembled precisely from 45 protein subunits for it to function correctly. One of its mitochondrial DNA (mtDNA) encoded subunits, ND1, is incorporated during the early stages assembly. However, little known about how mutations in ND1 affect this assembly process. We found that human 143B cybrid cells carrying a homoplasmic MT-ND1 mutation, could not translated. As result, were disrupted, with mature undetectable and I-linked...

10.1096/fj.201500137r article EN The FASEB Journal 2016-02-29
Sarah Stephenson Gregory Costain Laura E.R. Blok Michael Silk Thanh Nguyen and 95 more Xiaomin Dong Dana E. Alhuzaimi James J. Dowling Susan Walker Kimberly Amburgey Robin Z. Hayeems Lance H. Rodan Marc A. Schwartz Jonathan Picker Sally Ann Lynch Aditi Gupta Kristen Rasmussen Lisa A. Schimmenti Eric W. Klee Zhiyv Niu Katherine Agre Ilana Chilton Wendy K. Chung Anya Revah‐Politi Ping Yee Billie Au Christopher Griffith Melissa Racobaldo Annick Raas‐Rothschild Bruria Ben Zeev Ortal Barel Sébastien Moutton Fanny Morice‐Picard Virginie Carmignac Jenny Cornaton Nathalie Marle Orrin Devinsky Chandler L. Stimach Stephanie Burns Wechsler Bryan E. Hainline Katie Sapp Marjolaine Willems Ange‐Line Bruel Kerith‐Rae Dias Carey‐Anne Evans Tony Roscioli Rani Sachdev Suzanna E.L. Temple Ying Zhu Joshua Baker Ingrid E. Scheffer Fiona Gardiner Amy L. Schneider Alison M. Muir Heather C Mefford Amy Crunk Elizabeth M. Heise Francisca Millan Kristin G. Monaghan Richard Person Lindsay Rhodes Sarah Richards Ingrid M. Wentzensen Benjamin Cogné Bertrand Isidor Mathilde Nizon Marie Vincent Thomas Besnard Amélie Piton Carlo Marcelis Kohji Kato Norihisa Koyama Tomoo Ogi Elaine Goh Christopher M. Richmond David J. Amor Jessica O. Boyce Angela Morgan Michael S. Hildebrand Antony Kaspi Melanie Bahlo Rún Friðriksdóttir Hildigunnur Katrínardóttir Patrick Sulem Kári Stéfansson Hans T. Björnsson Simone Mandelstam Manuela Morleo Milena Mariani Marcello Scala Andrea Accogli Annalaura Torella Valeria Capra Mathew Wallis Sandra Jansen Quinten Waisfisz Hugoline G. de Haan Simon Sadedin Sze Chern Lim Susan M. White David B. Ascher

10.1016/j.ajhg.2022.03.002 article EN publisher-specific-oa The American Journal of Human Genetics 2022-04-01

Apart from their essential role in generating ATP, mitochondria also act as local calcium (Ca2+) buffers to tightly regulate intracellular Ca2+ concentration. To do this, utilize the electrochemical potential across inner membrane (ΔΨm) sequester Ca2+. The influx of into stimulates three rate-limiting dehydrogenases citric acid cycle, increasing electron transfer through oxidative phosphorylation (OXPHOS) complexes. This stimulation maintains ΔΨm, which is temporarily dissipated positive...

10.3791/55166 article EN Journal of Visualized Experiments 2017-01-24

Clinical exome sequencing typically achieves diagnostic yields of 30%-57.5% in individuals with monogenic rare diseases. Undiagnosed diseases programmes implement strategies to improve outcomes for these individuals.We share the lessons learnt from first 3 years Diseases Program-Victoria, an Australian programme embedded within a clinical genetics service state Victoria focus on paediatric diseases.We enrolled families who remained without diagnosis after genomic (panel, or genome) between...

10.1136/jmedgenet-2021-107902 article EN Journal of Medical Genetics 2021-11-05

Mitochondrial DNA (mtDNA) is replicated throughout life in postmitotic cells, resulting higher levels of somatic mutation than nuclear genes. However, controversy remains as to the importance low-level mtDNA mutants cancerous and normal human tissues. To capture mutations for functional analysis, we generated synaptosome cybrids from synaptic endings isolated fresh hippocampus cortex brain biopsies. We analyzed whole genome 120 cybrid clones derived four individual donors by chemical...

10.1002/humu.22694 article EN Human Mutation 2014-09-13

Biallelic deletions extending into the ATPase family AAA-domain containing protein 3A (ATAD3A) gene lead to infantile lethality with severe pontocerebellar hypoplasia (PCH). However, only 12 such cases have been reported worldwide date, and genotype-phenotype correlations are not well understood. We describe associated same novel biallelic of ATAD3A ATAD3B/3A regions in Japanese siblings spinal cord multiple malformations, including PCH, leading neonatal death. The is essential for normal...

10.1016/j.ymgmr.2022.100912 article EN cc-by Molecular Genetics and Metabolism Reports 2022-08-24

Apart from their essential role in generating ATP, mitochondria also act as local calcium (Ca2+) buffers to tightly regulate intracellular Ca2+ concentration. To do this, utilize the electrochemical potential across inner membrane (ΔΨm) sequester Ca2+. The influx of into stimulates three rate-limiting dehydrogenases citric acid cycle, increasing electron transfer through oxidative phosphorylation (OXPHOS) complexes. This stimulation maintains ΔΨm, which is temporarily dissipated positive...

10.3791/55166-v article EN Journal of Visualized Experiments 2017-01-24

Summary Interpretation of next-generation sequencing data individuals with an apparent sporadic neurodevelopmental disorder (NDD) often focusses on pathogenic variants in genes associated NDD, assuming full clinical penetrance limited variable expressivity. Consequently, inherited dominant disorders may be overlooked when the transmitting parent is clinically unaffected. While de novo explain a substantial proportion cases NDDs, significant number remains undiagnosed possibly explained by...

10.1101/2021.10.04.21264162 preprint EN cc-by medRxiv (Cold Spring Harbor Laboratory) 2021-10-05
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