José G. Hernández Cifre

ORCID: 0000-0003-1764-5748
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About
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Research Areas
  • Rheology and Fluid Dynamics Studies
  • Polymer crystallization and properties
  • Surfactants and Colloidal Systems
  • Blood properties and coagulation
  • Material Dynamics and Properties
  • Electrostatics and Colloid Interactions
  • Dendrimers and Hyperbranched Polymers
  • Protein purification and stability
  • Advanced Polymer Synthesis and Characterization
  • Phase Equilibria and Thermodynamics
  • Protein Structure and Dynamics
  • Polymer Surface Interaction Studies
  • Nanopore and Nanochannel Transport Studies
  • Microfluidic and Capillary Electrophoresis Applications
  • Block Copolymer Self-Assembly
  • Enzyme Structure and Function
  • Polysaccharides Composition and Applications
  • Analytical Chemistry and Chromatography
  • Fuel Cells and Related Materials
  • Electrochemical Analysis and Applications
  • Gold and Silver Nanoparticles Synthesis and Applications
  • Force Microscopy Techniques and Applications
  • Photosynthetic Processes and Mechanisms
  • RNA and protein synthesis mechanisms
  • Microplastics and Plastic Pollution

Universidad de Murcia
2014-2025

University of Oslo
2006-2010

Universidade da Madeira
2009

National University of Distance Education
2009

Institute for Energy Technology
2006

Technische Universität Berlin
2004

Delft University of Technology
2003

Huaying Zhao Rodolfo Ghirlando Carlos Alfonso Fumio Arisaka Ilan Attali and 95 more David L. Bain Marina Bakhtina Donald Becker Gregory J. Bedwell Ahmet Bekdemir Tabot M. D. Besong Catherine Birck Chad A. Brautigam William Brennerman Olwyn Byron Agnieszka Bzowska Jonathan B. Chaires Catherine T. Chaton Helmut Cölfen Keith D. Connaghan Kimberly A. Crowley Ute Curth Tina Daviter William L. Dean Ana I. Díez Christine Ebel Debra M. Eckert Leslie E. Eisele Edward Eisenstein Patrick England Carlos Escalante Jeffrey Fagan Robert Fairman Ron M. Finn Wolfgang Fischle José Garcı́a de la Torre Jayesh Gor Henning Gustafsson Damien Hall Stephen E. Harding José G. Hernández Cifre Andrew B. Herr Elizabeth E. Howell R. Stefan Isaac Shu-Chuan Jao Davis Jose Soon-Jong Kim Bashkim Kokona Jack A. Kornblatt Dalibor Košek Elena Krayukhina Daniel Krzizike Eric A. Kusznir Hye-Won Kwon Adam G. Larson Thomas M. Laue Aline Le Roy Andrew Leech Hauke Lilie Karolin Luger Juan R. Luque-Ortega Jia Ma C.A. May Ernest L. Maynard Anna Modrak‐Wójcik Yee-Foong Mok Norbert Mücke Luitgard Nagel‐Steger Geeta J. Narlikar Masanori Noda Amanda Nourse Tomáš Obšil Chad K. Park Jin-Ku Park Peter D. Pawelek Erby E. Perdue Stephen J. Perkins Matthew A. Perugini Craig L. Peterson Martin G. Peverelli Grzegorz Piszczek Gali Prag Peter E. Prevelige Bertrand Raynal Lenka Řežábková Klaus Richter Alison E. Ringel Rose Rosenberg Arthur J. Rowe Arne C. Rufer David J. Scott Javier Seravalli Alexandra S. Solovyova Renjie Song David Staunton Caitlin I. Stoddard Katherine Stott Holger M. Strauss Werner Streicher John P. Sumida

Analytical ultracentrifugation (AUC) is a first principles based method to determine absolute sedimentation coefficients and buoyant molar masses of macromolecules their complexes, reporting on size shape in free solution. The purpose this multi-laboratory study was establish the precision accuracy basic data dimensions AUC validate previously proposed calibration techniques. Three kits cell assemblies containing radial temperature tools bovine serum albumin (BSA) reference sample were...

10.1371/journal.pone.0126420 article EN public-domain PLoS ONE 2015-05-21

The hydrodynamic interaction is an essential effect to consider in Brownian dynamics simulations of polymer and nanoparticle dilute solutions. Several mathematical approaches can be used build algorithms with interaction, the most common them being exact but time demanding Cholesky decomposition Chebyshev polynomial expansion. Recently, Geyer Winter [J. Chem. Phys. 130, 1149051 (2009)] have proposed a new approximation treat that seems quite efficient increasingly used. So far, systematic...

10.1063/1.3626868 article EN The Journal of Chemical Physics 2011-08-26

Size-exclusion chromatography (SEC) is presently a widely used and very informative technique for the characterization of macromolecules in solution. Beyond first implementations SEC-which required cumbersome column calibrations were mainly intended determination molecular weights-the modern SEC approach involving multiple detectors (md-SEC) based on solution properties such as intrinsic viscosity light scattering. Thus, md-SEC enables direct more efficient weights, well relationships...

10.3390/polym17050582 article EN Polymers 2025-02-22

The steady-state properties of flexible polymer chains in solutions undergoing elongational flow have been studied using Brownian dynamics simulation. coil–stretch transition is observed when the rate, ε̇ exceeds a certain critical value ε̇c. In this work, we describe detail simulation procedure and how to extract dimensions, solution viscosity, birefringence from trajectories. Preliminary simulations involving no hydrodynamic interaction (HI) are used check procedures by comparing their...

10.1122/1.550987 article EN Journal of Rheology 1999-03-01

The formation of associative networks in semidilute aqueous solutions hydrophobically modified hydroxyethylcellulose (HM-HEC) is dependent on intermolecular hydrophobic interactions. Addition hydroxypropyl-β-cyclodextrin (HP-β-CD) monomers to the system provides decoupling these associations via inclusion complex with polymer tails. Results from viscosity, NMR self-diffusion, and dynamic light scattering (DLS) measurements show that interactions HM-HEC are effectively suppressed when level...

10.1021/jp056828v article EN The Journal of Physical Chemistry B 2006-03-16

We propose a multiscale protocol for the simulation of conformation and dynamics dendrimer molecules in dilute solution. Conformational properties (radius gyration, mass distribution, scattering intensities) overall hydrodynamic (translational diffusion intrinsic viscosity) are predicted by means very simple coarse-grained bead-and-spring model, whose parameters not adjusted against experimental properties, but rather they obtained from previous, atomic-level simulations which also quite...

10.1021/ja901275d article EN Journal of the American Chemical Society 2009-05-28

Abstract Summary: We present and assess the use of non‐equilibrium molecular dynamics (NEMD) simulation method for direct study linear viscoelastic behavior polymer melts. The melt is modeled by a collection repulsive, anharmonic multibead chains subjected to small amplitude oscillatory shear flow. results chain lengths below critical entanglement length obtain good agreement with theoretical melts low weight. range oscillation frequencies attainable in few decades. Thus we use, as...

10.1002/mats.200400021 article EN Macromolecular Theory and Simulations 2004-11-18

A computer programs suite, SIMUFLEX, has been constructed for the calculation of solution properties flexible macromolecules modeled as bead-and-connector models arbitrary topology. The suite consists mainly two independent programs, BROWFLEX that generates macromolecular trajectory by using Brownian dynamics technique and ANAFLEX analyzes to get macromolecule. In this paper, we describe theoretical aspects about model algorithm used some numerous can be evaluated. order provide examples...

10.1021/ct900269n article EN Journal of Chemical Theory and Computation 2009-08-24

Effects of temperature on the association behavior in aqueous solutions a series thermosensitive poly(N-isopropylacrylamide)-block-poly(ethylene glycol)-block-poly(N-isopropylacrylamide) triblock copolymers (PNIPAAMm-b-PEGn-b-PNIPAAMm) with length PNIPAAM block fixed (m ≈ 67) and different lengths PEG (n = 23, 34, 77, 165) have been studied aid turbidity, dynamic light scattering (DLS), Monte Carlo simulations. The turbidity results show that sharp transition to high values is shifted higher...

10.1039/c1sm05679d article EN Soft Matter 2011-01-01

The non-Newtonian behavior of dilute polymer solutions is investigated by computer simulation a bead-and-spring model, using the Brownian dynamics technique to evaluate shear rate dependence intrinsic viscosity. This consequence combined effects hydrodynamic interaction, excluded volume, and finite extensibility. simulations allow study influence each effect separately. When all are considered, results can be compared experimental data solution viscosities, which available just in region...

10.1021/ma0482617 article EN Macromolecules 2005-01-20

We study the effects of anaesthetic molecules at surgical concentration on a biological membrane model, in an attempt to elucidate mechanism by which interacts with membrane. Using molecular dynamics simulation benzyl alcohol embedded lipid membrane, we detected no relevant structural change hydrocarbon region that might explain action anaesthetic. Only slight increase disorder deepest zones was measured from our simulations presence alcohol. No variation thickness surface area per molecule,...

10.1021/jp9714532 article EN The Journal of Physical Chemistry B 1998-01-01

A bead-and-spring model has been used to simulate the behavior of thermoresponsive asymmetric diblock amphiphilic copolymers with aid Monte Carlo simulations. The alteration thermodynamic conditions was mimicked by using a Lennard-Jones potential, which related measured temperatures comparison experimental data for aqueous solutions two sets copolymers, namely methoxypoly(ethylene glycol)-block-poly(N-isopropylacrylamide), one different lengths hydrophilic block (MPEGn-b-PNIPAAM71) and...

10.1021/jp102442q article EN The Journal of Physical Chemistry B 2010-06-21

When linear polymer chains in dilute solution are subject to extensional flow, each chain the sample experiences coil-stretch transition at a different time. Using Brownian dynamics simulation, we have studied distribution of times terms rate and length chains. If instead time one characterizes effect flow by accumulated strain, then its moments seem take general forms, independent molecular weight rate, containing some numerical, universal constants that been evaluated from dynamical...

10.1063/1.1410379 article EN The Journal of Chemical Physics 2001-11-22

Abstract The behavior of dilute solutions linear polyelectrolyte molecules both at equilibrium and under shear flow is modeled by using the Brownian dynamics simulation technique. mathematical polymer model consists a bead‐and‐spring chain with charged beads that interact through screened Debye–Hückel potential as well FENE spring forces. In addition hydrodynamic interaction included in simulations. We also illustrate how to parameterize real chain, an example often studied sodium...

10.1002/polb.20994 article EN Journal of Polymer Science Part B Polymer Physics 2006-11-15
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