Aniket Shetty

ORCID: 0000-0003-2353-9589
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About
Contact & Profiles
Research Areas
  • Endometrial and Cervical Cancer Treatments
  • Ovarian cancer diagnosis and treatment
  • Genetic Associations and Epidemiology
  • Kruppel-like factors research
  • Asthma and respiratory diseases
  • Genomic variations and chromosomal abnormalities
  • Genomics and Rare Diseases
  • Cancer Genomics and Diagnostics
  • Glioma Diagnosis and Treatment
  • RNA modifications and cancer
  • Dermatology and Skin Diseases
  • Epigenetics and DNA Methylation
  • Myeloproliferative Neoplasms: Diagnosis and Treatment
  • IL-33, ST2, and ILC Pathways
  • Eosinophilic Esophagitis
  • Brain Metastases and Treatment
  • Genetic factors in colorectal cancer
  • Congenital heart defects research
  • Helicobacter pylori-related gastroenterology studies
  • RNA Research and Splicing
  • Genetics and Neurodevelopmental Disorders
  • HIV Research and Treatment
  • Microtubule and mitosis dynamics
  • Immune Cell Function and Interaction
  • CAR-T cell therapy research

Dana-Farber Cancer Institute
2019-2025

University of Colorado Denver
2018-2025

University of Colorado Anschutz Medical Campus
2018-2020

University of California, San Diego
2016

University College London
2005

Christian R. Marshall Daniel P. Howrigan Daniele Merico Bhooma Thiruvahindrapuram Wenting Wu and 95 more Douglas S. Greer Danny Antaki Aniket Shetty Peter Holmans Dalila Pinto Madhusudan Gujral William M. Brandler Dheeraj Malhotra Zhouzhi Wang Karin V. Fuentes Fajarado Michelle S. Maile Stephan Ripke Ingrid Agartz Margot Albus Madeline Alexander Farooq Amin Joshua Atkins Silviu‐Alin Bacanu Richard A. Belliveau Sarah E. Bergen Marcelo Bertalan Elizabeth Bevilacqua Tim B. Bigdeli Donald W. Black Richard Bruggeman Nancy G. Buccola Randy L. Buckner Brendan Bulik‐Sullivan William Byerley Wiepke Cahn Guiqing Cai Murray J. Cairns Dominique Campion Rita M. Cantor Vaughan J. Carr Noa Carrera Stanley V. Catts Kimberley D. Chambert Wei Cheng C. Robert Cloninger David Cohen Paul Cormican Nick Craddock Benedicto Crespo‐Facorro James J. Crowley David Curtis Michael Davidson Kenneth L. Davis Franziska Degenhardt Jurgen Del‐Favero Lynn E. DeLisi Dimitris Dikeos Timothy G. Dinan Srdjan Djurovic Gary Donohoe Elodie Drapeau Jubao Duan Frank Dudbridge Peter Eichhammer Johan G. Eriksson Valentina Escott‐Price Laurent Essioux Ayman H. Fanous Kai-How Farh Martilias S. Farrell Josef Frank Lude Franke Robert Freedman Nelson B. Freimer Joseph I. Friedman Andreas J. Forstner Menachem Fromer Giulio Genovese Lyudmila Georgieva Elliot S. Gershon Ina Giegling Paola Giusti‐Rodríguez Stephanie Godard Jacqueline I. Goldstein Jacob Gratten Lieuwe de Haan Marian L. Hamshere Thomas Hansen Thomas Hansen Vahram Haroutunian Annette M. Hartmann Frans A. Henskens Stefan Herms Joel N. Hirschhorn Per Hoffmann Andrea Hofman Hailiang Huang Masashi Ikeda Inge Joa Anna K. Kähler

10.1038/ng.3725 article EN Nature Genetics 2016-11-21

Abstract Epithelial-to-mesenchymal transition (EMT) is associated with tumor initiation, metastasis, and drug resistance. However, the mechanisms underlying these associations are largely unknown. We studied several types to identify source of EMT gene expression signals a potential mechanism resistance immuno-oncology treatment. Across types, EMT-related was strongly stroma-related genes. Based on RNA sequencing multiple patient-derived xenograft models, enriched in stroma versus...

10.1038/s41598-023-28480-9 article EN cc-by Scientific Reports 2023-02-21
Eduardo A. Maury Maxwell A. Sherman Giulio Genovese Thomas G. Gilgenast Tushar Kamath and 95 more S.J. Burris Prashanth Rajarajan Erin Flaherty Schahram Akbarian Andrew Chess Steven A. McCarroll Po−Ru Loh Jennifer E. Phillips‐Cremins Kristen Brennand Evan Z. Macosko James Walters Michael O’Donovan Patrick F. Sullivan Jonathan Sebat Eunjung A. Lee Christopher A. Walsh Christian R. Marshall Daniele Merico Bhooma Thiruvahindrapuram Zhouzhi Wang Stephen W. Scherer Daniel P. Howrigan Stephan Ripke Brendan Bulik‐Sullivan Kai-How Farh Menachem Fromer Jacqueline I. Goldstein Hailiang Huang Phil Lee Mark J. Daly Benjamin M. Neale Richard A. Belliveau Sarah E. Bergen Elizabeth Bevilacqua Kimberley D. Chambert Colm Ó'Dúshláine Edward M. Scolnick Jordan W. Smoller Jennifer L. Moran Aarno Palotie Tracey L. Petryshen Wenting Wu Douglas S. Greer Danny Antaki Aniket Shetty Madhusudan Gujral William M. Brandler Dheeraj Malhotra Karin V. Fuentes Fajarado Michelle S. Maile Peter Holmans Noa Carrera Nick Craddock Valentina Escott‐Price Lyudmila Georgieva Marian L. Hamshere David Kavanagh Sophie E. Legge Andrew Pocklington Alexander Richards Douglas M. Ruderfer Nigel Williams George Kirov Michael J. Owen Dalila Pinto Guiqing Cai Kenneth L. Davis Elodie Drapeau Joseph I. Friedman Vahram Haroutunian Elena Parkhomenko Abraham Reichenberg Jeremy M. Silverman Joseph D. Buxbaum Enrico Domenici Ingrid Agartz Srdjan Djurovic Morten Mattingsdal Ingrid Melle Ole A. Andreassen Erik G. Jönsson Erik Söderman Margot Albus Madeline Alexander Claudine Laurent Douglas F. Levinson Farooq Amin Joshua Atkins Murray J. Cairns Rodney J. Scott Paul A. Tooney Jing Qin Wu Silviu‐Alin Bacanu Tim B. Bigdeli Mark A. Reimers

While germline copy-number variants (CNVs) contribute to schizophrenia (SCZ) risk, the contribution of somatic CNVs (sCNVs)-present in some but not all cells-remains unknown. We identified sCNVs using blood-derived genotype arrays from 12,834 SCZ cases and 11,648 controls, filtering at loci recurrently mutated clonal blood disorders. Likely early-developmental were more common (0.91%) than controls (0.51%, p = 2.68e-4), with recurrent deletions exons 1-5

10.1016/j.xgen.2023.100356 article EN cc-by Cell Genomics 2023-07-06

Mcm2–7 (MCM) proteins are part of the origin licensing machinery that regulates initiation DNA replication. Geminin is a repressor and prevents reinitiation replication during S–G2–M phase by blocking reloading at origins. Here, we have analysed these factors (RLFs) to determine whether pathway becomes deregulated mammary carcinogenesis, assessed their potential value as prognostic markers. Protein expression profiles were generated for Ki67, Mcm2, geminin, HER-2, ER PR in series reduction...

10.1038/sj.bjc.6602829 article EN cc-by-nc-sa British Journal of Cancer 2005-11-01

Abstract In the United States, Endometrial carcinoma (EC) is most frequently occurring gynecologic cancer. Many ECs harbor mutations in cell cycle regulatory genes including TP53 and RB1, amongst others. RB p53 both regulate G1/S transition while also regulates G2/M mitotic progression, all of which rely on targetable kinases. It likely that many defects some aspect regulation, but there has been no profiling p53- or RB- linked functional capacity corresponding therapeutic vulnerabilities EC...

10.1158/2767-9764.crc-24-0028 article EN cc-by Cancer Research Communications 2025-02-11

<p>Aurora kinase B inhibitor sensitive endometrial carcinoma cells reveal more rapidly decreasing percentages of mitotic than resistant in the setting Aurora inhibition. <b>A,</b> A cartoon demonstrating experimental setup is shown. <b>B,</b> HEC1B and ARK1 were treated with vehicle (DMSO) or a dose curve CDK1 (CDK1i) Ro-3306 for 16 hours. The then underwent bromodeoxyuridine (BrdU)/propidium iodide (PI) cell cycle flow cytometry profiling. Shown here are bar...

10.1158/2767-9764.28904156 preprint EN 2025-04-30

<p>Endometrial carcinomas with transcriptionally evident mitotic spindle organization or progression regulatory defects are sensitive to Aurora Kinase B inhibition. <b>A,</b> Cartoon illustrating the different kinases governing G2/M transition and what part of mitosis inhibitors these target (Aurora kinase A (AURKA), (AURKB), Polo-like 1 (PLK1)). <b>B</b> <b>C,</b> Protein lysates were prepared from untreated cell lines (<b>B</b>)...

10.1158/2767-9764.28904159 preprint EN 2025-04-30

<p>RB and some form of p53 are expressed in the majority endometrial carcinoma cells regardless genomic status but have varying regulatory or functional ability. <b>A</b> <b>B,</b> Protein lysates were prepared from untreated cell lines (left each panel) organoid (right analyzed by western blot. In <b>A</b>, membranes for type probed RB, stripped re-probed tubulin as a loading control. B, p53, then <b>C</b> <b>D,</b> Organoids...

10.1158/2767-9764.28904165 preprint EN 2025-04-30

<p>Endometrial carcinoma cell sensitivity to G1/S targeted therapies correlates with RB regulatory status. <b>A</b> and <b>B,</b> Protein lysates were prepared from untreated lines (left in each panel) organoid (right analyzed by western blot. In <b>A</b>, membranes for type probed CDK4, stripped re-probed CDK6, tubulin as a loading control. <b>B</b>, Cyclin E1, then An arrow indicates the main E1 isoform, below that, low molecular weight...

10.1158/2767-9764.28904162 preprint EN 2025-04-30

<p>RB intact regulation and mitotic progression deficient endometrial carcinoma cells demonstrate different responses to cell cycle targeting therapies <i>in vivo</i>. <b>A,</b> Cartoon demonstrating vivo</i> study experimental setup. For each study, after treatment initiation, mice were euthanized once they developed signs of morbidity; then ascites volume was obtained, gross photos taken, residual tumor harvested for all animals possible....

10.1158/2767-9764.28904150 preprint EN 2025-04-30

<p>Aurora kinase B inhibitor sensitive endometrial carcinoma cells show more rapidly decreasing percentages of mitotic than resistant models in the setting nocodazole-induced microtubule instability. <b>A,</b> A cartoon demonstrating experimental setup is shown. <b>B,</b> HEC1B, ARK1, and AN3CA were treated for 24 hours with vehicle (DMSO) or a dose curve nocodazole (Noc) then underwent bromodeoxyuridine (BrdU)/propidium iodide (PI) flow cytometry cell cycle...

10.1158/2767-9764.28904153 preprint EN 2025-04-30

<div>Abstract<p>In the United States, Endometrial carcinoma (EC) is most frequently occurring gynecologic cancer. Many ECs harbor mutations in cell cycle regulatory genes including <i>TP53</i> and <i>RB1</i>, amongst others. RB p53 both regulate G1/S transition while also regulates G2/M mitotic progression, all of which rely on targetable kinases. It likely that many defects some aspect regulation, but there has been no profiling p53- or RB- linked...

10.1158/2767-9764.c.7795994 preprint EN 2025-04-30
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