Thomas Quiroz Monnens

ORCID: 0000-0003-3172-0150
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About
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Research Areas
  • Plant Pathogenic Bacteria Studies
  • Plant Disease Resistance and Genetics
  • Plant-Microbe Interactions and Immunity
  • Plant Pathogens and Resistance
  • Plant Pathogens and Fungal Diseases
  • Legume Nitrogen Fixing Symbiosis
  • Vibrio bacteria research studies
  • Plant Molecular Biology Research
  • Plant Genetic and Mutation Studies
  • Aquaculture disease management and microbiota
  • Bacterial biofilms and quorum sensing
  • Genomics and Phylogenetic Studies
  • Probiotics and Fermented Foods
  • Salmonella and Campylobacter epidemiology
  • Fungal Plant Pathogen Control

Université Toulouse III - Paul Sabatier
2022-2024

Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement
2022-2024

Université de Toulouse
2022-2024

Centre National de la Recherche Scientifique
2022-2024

Laboratoire des Interactions Plantes Micro-Organismes
2024

Utrecht University
2021-2022

Wageningen University & Research
2021

Plant diseases are an important threat to food production. While major pathogenicity determinants required for disease have been extensively studied, less is known on how pathogens thrive during host colonization, especially at early infection stages. Here, we used randomly barcoded-transposon insertion site sequencing (RB-TnSeq) perform a genome-wide screen and identify key bacterial fitness of the vascular pathogen Xanthomonas campestris pv (Xcc) cauliflower plant (Brassica oleracea). This...

10.1111/nph.18313 article EN New Phytologist 2022-06-16

Peronospora effusa causes downy mildew, the economically most important disease of cultivated spinach worldwide. To date, 19 P. races have been denominated based on their capacity to break resistances, but genetic diversity and evolutionary processes that contribute race emergence are unknown. Here, we performed first systematic analysis showing those emerge by both asexual sexual reproduction. Specifically, studied 26 isolates from 16 mitochondrial nuclear comparative genomics....

10.1111/1462-2920.15944 article EN cc-by-nc Environmental Microbiology 2022-02-22

SUMMARY Genetic screens are powerful tools for biological research and one of the reasons success thale cress Arabidopsis thaliana as a model. Here, we describe whole‐genome sequencing 871 lines from Homozygous EMS Mutant (HEM) collection novel resource forward reverse genetics. With an average 576 high‐confidence mutations per HEM line, over three independent altering protein sequences found on gene in collection. Pilot genetics experiments reproductive, developmental, immune physiological...

10.1111/tpj.16954 article EN The Plant Journal 2024-07-29

Bacteria of the genus Xanthomonas cause economically significant diseases in various crops. Their virulence is dependent on translocation type III effectors (T3Es) into plant cells by secretion system (T3SS), a process regulated master response regulator HrpG. Although HrpG has been studied for over two decades, its regulon across diverse species, particularly beyond secretion, remains understudied.

10.1186/s12864-024-10684-6 article EN cc-by-nc-nd BMC Genomics 2024-08-09

Fire blight represents a widespread disease in Lilium spp. and is caused by the necrotrophic Ascomycete Botrytis elliptica . There are >100 species that fall into distinct phylogenetic groups these have been used to generate contemporary commercial genotypes. It known among lily breeders growers different of lilies differ susceptibility fire blight, but genetic basis mechanisms unresolved. The aim this study was quantify differences between plant genotypes virulence fungal isolates....

10.3389/fpls.2021.660337 article EN cc-by Frontiers in Plant Science 2021-06-28

Abstract Genetic screens are powerful tools for biological research and one of the reasons success thale cress Arabidopsis thaliana as a model species. Here, we describe whole-genome sequencing 871 lines from Homozygous EMS Mutant (HEM) collection novel resource forward reverse genetics. With an average 576 high-confidence mutations per HEM line, over three independent altering protein sequence found on gene in collection. Pilot genetics experiments reproductive, developmental physiological...

10.1101/2023.10.26.564234 preprint EN cc-by-nc-nd bioRxiv (Cold Spring Harbor Laboratory) 2023-10-27

ABSTRACT Bacteria of the genus Xanthomonas cause economically significant diseases in various crops. Their virulence is dependent on translocation type III effectors (T3Es) into plant cells by secretion system (T3SS), a process regulated master response regulator HrpG. Although HrpG has been studied for over two decades, its regulon across diverse species, particularly beyond secretion, remains understudied. In this study, we conducted transcriptome sequencing to explore regulons 17 strains,...

10.1101/2024.05.17.594730 preprint EN cc-by-nc-nd bioRxiv (Cold Spring Harbor Laboratory) 2024-05-18

Bacteria use various motility mechanisms to explore their environments. Chemotaxis is the ability of a motile bacterial cell direct its movement in response chemical gradients. A number methods have been developed and widely used study chemotactic responses chemoeffectors including capillary, agar plug, microscopic slide, microfluidic assays. While valuable, these assays are primarily designed monitor rapid on small scale, which poses challenges collecting large quantities attracted...

10.17504/protocols.io.n2bvjn65bgk5/v1 preprint EN 2024-05-03

Bacteria use various motility mechanisms to explore their environments. Chemotaxis is the ability of a motile bacterial cell direct its movement in response chemical gradients. A number methods have been developed and widely used study chemotactic responses chemoeffectors including capillary, agar plug, microscopic slide, microfluidic assays. While valuable, these assays are primarily designed monitor rapid on small scale, which poses challenges collecting large quantities attracted...

10.1371/journal.pone.0305037 article EN cc-by PLoS ONE 2024-06-05

Abstract Plant diseases are an important threat to food production. While major pathogenicity determinants required for disease have been extensively studied, less is known on how pathogens thrive during host colonization especially at early infection stages. Here, we used randomly barcoded-transposon insertion site sequencing (RB-TnSeq) perform a genome-wide screen and identify key bacterial fitness of the vascular pathogen Xanthomonas campestris pv. ( Xcc ) cauliflower plant Brassica...

10.1101/2022.02.07.479439 preprint EN cc-by-nc-nd bioRxiv (Cold Spring Harbor Laboratory) 2022-02-07

Abstract Peronospora effusa causes downy mildew, the economically most important disease of cultivated spinach worldwide. To date, 19 P. races have been denominated based on their capacity to break resistances, but genetic diversity and evolutionary processes that contribute race emergence are unknown. Here, we performed first systematic analysis showing those emerge by both asexual sexual reproduction. Specifically, studied 26 isolates from 16 mitochondrial nuclear comparative genomics....

10.1101/2021.11.05.467349 preprint EN cc-by bioRxiv (Cold Spring Harbor Laboratory) 2021-11-05
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