Kishore R. Kumar

ORCID: 0000-0003-3482-6962
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About
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Research Areas
  • Genetic Neurodegenerative Diseases
  • Hereditary Neurological Disorders
  • Neurological diseases and metabolism
  • Neurological disorders and treatments
  • Mitochondrial Function and Pathology
  • Parkinson's Disease Mechanisms and Treatments
  • Genomics and Rare Diseases
  • Genetics and Neurodevelopmental Disorders
  • Metabolism and Genetic Disorders
  • Neurogenetic and Muscular Disorders Research
  • Lysosomal Storage Disorders Research
  • RNA regulation and disease
  • Nuclear Receptors and Signaling
  • CRISPR and Genetic Engineering
  • Cerebral Palsy and Movement Disorders
  • Ion channel regulation and function
  • Cellular transport and secretion
  • RNA modifications and cancer
  • Botulinum Toxin and Related Neurological Disorders
  • Amyotrophic Lateral Sclerosis Research
  • Microtubule and mitosis dynamics
  • Glycogen Storage Diseases and Myoclonus
  • Endoplasmic Reticulum Stress and Disease
  • Autism Spectrum Disorder Research
  • Muscle Physiology and Disorders

Garvan Institute of Medical Research
2015-2025

The University of Sydney
2016-2025

Concord Repatriation General Hospital
2019-2025

St Vincent's Clinic
2023-2025

UNSW Sydney
2015-2025

St Vincent's Health
2023-2025

Royal North Shore Hospital
2015-2025

St Vincent's Hospital
2023-2025

University of Lübeck
2011-2024

Harry Perkins Institute of Medical Research
2024

More than 50 neurological and neuromuscular diseases are caused by short tandem repeat (STR) expansions, with 37 different genes implicated to date. We describe the use of programmable targeted long-read sequencing Oxford Nanopore’s ReadUntil function for parallel genotyping all known neuropathogenic STRs in a single assay. Our approach enables accurate, haplotype-resolved assembly DNA methylation profiling STR sites, from list predetermined candidates. This correctly diagnoses individuals...

10.1126/sciadv.abm5386 article EN cc-by-nc Science Advances 2022-03-04
Jonggeol Jeffrey Kim Dan Vitale Diego Véliz Otani Michelle Mulan Lian Karl Heilbron and 95 more Stella Aslibekyan Adam Auton Elizabeth Babalola Robert K. Bell Jessica Bielenberg Katarzyna Bryc Emily Bullis Paul J. Cannon Daniella Coker Gabriel Cuéllar-Partida Devika Dhamija Sayantan Das Sarah L. Elson Nicholas Eriksson Teresa Filshtein Alison Fitch Kipper Fletez‐Brant Pierre Fontanillas Will Freyman Julie M. Granka Alejandro Hernandez Barry Hicks David A. Hinds Ethan M. Jewett Yunxuan Jiang Katelyn Kukar Alan Kwong Keng‐Han Lin Bianca A. Llamas Maya Lowe Jey C. McCreight Matthew H. McIntyre Steven J. Micheletti Meghan E. Moreno Priyanka Nandakumar Dominique T. Nguyen Elizabeth S. Noblin Jared O’Connell Aaron A. Petrakovitz G. David Poznik Alexandra Reynoso Madeleine Schloetter Morgan Schumacher Anjali J. Shastri Janie F. Shelton Jingchunzi Shi Suyash Shringarpure Qiaojuan Jane Su Susana A. Tat Christophe Toukam Tchakouté Vinh Tran Joyce Y. Tung Xin Wang Wei Wang Catherine H. Weldon Peter Wilton Corinna D. Wong Hirotaka Iwaki Julie Lake Caroline Warly Solsberg Hampton L. Leonard Mary B. Makarious Eng‐King Tan Andrew Singleton Sara Bandrés‐Ciga Alastair Noyce Emilia Gatto Marcelo Kauffman Samson Khachatryan Zaruhi Tavadyan Claire E. Shepherd Julie Hunter Kishore R. Kumar Melina Ellis Miguel E. Rentería Sulev Kõks Alexander Zimprich Artur Francisco Schumacher Schuh Carlos Roberto de Mello Rieder Paula Saffie Awad Vítor Tumas Sarah Camargos Edward A. Fon Oury Monchi Ted Fon Benjamin Pizarro Galleguillos Marcelo Miranda M. Leonor Bustamante Patricio Olguı́n Pedro Chaná Beisha Tang Huifang Shang Jifeng Guo Piu Chan Wei Luo

Although over 90 independent risk variants have been identified for Parkinson's disease using genome-wide association studies, most studies performed in just one population at a time. Here we large-scale multi-ancestry meta-analysis of with 49,049 cases, 18,785 proxy cases and 2,458,063 controls including individuals European, East Asian, Latin American African ancestry. In meta-analysis, 78 significant loci, 12 potentially novel loci (MTF2, PIK3CA, ADD1, SYBU, IRS2, USP8, PIGL, FASN, MYLK2,...

10.1038/s41588-023-01584-8 article EN cc-by Nature Genetics 2023-12-28

The cerebellar ataxias (CAs) are a heterogeneous group of disorders characterized by progressive incoordination. Seventeen repeat expansion (RE) loci have been identified as the primary genetic cause and account for >80% diagnoses. Despite this, diagnostic testing is limited inefficient, often utilizing single gene assays. This study evaluates effectiveness long- short-read sequencing tools CA. We recruited 110 individuals (48 females, 62 males) with clinical diagnosis Short-read genome...

10.1101/gr.279634.124 article EN Genome Research 2025-02-27

<h3>Objective:</h3> To determine nonmotor signs (NMS) and evaluate the utility of several diagnostic tools in patients with de novo Parkinson disease (PD). <h3>Methods:</h3> This is a large single-center study DeNoPa cohort, including frequency-matched healthy controls. covers motor signs, NMS, combination tests olfactory testing, transcranial sonography substantia nigra (TCS), polysomnography (PSG). We report frequency characteristics NMS outcomes at time diagnosis. <h3>Results:</h3>...

10.1212/wnl.0b013e3182a6cbd5 article EN Neurology 2013-08-31

A study was undertaken to identify the gene underlying DYT4 dystonia, a dominantly inherited form of spasmodic dysphonia combined with other focal or generalized dystonia and characteristic facies body habitus, in an Australian family.Genome-wide linkage analysis carried out 14 family members followed by genome sequencing 2 individuals. The index patient underwent detailed neurological follow-up examination, including electrophysiological studies magnetic resonance imaging scanning. Biopsies...

10.1002/ana.23829 article EN Annals of Neurology 2012-12-14

Objectives The majority of people with suspected genetic dystonia remain undiagnosed after maximal investigation, implying that a number causative genes have not yet been recognized. We aimed to investigate this paucity diagnoses. Methods undertook weighted burden analysis whole‐exome sequencing (WES) data from 138 individuals unresolved generalized etiology, followed by additional case‐finding international databases, first for the gene implicated ( VPS16 ), and then other functionally...

10.1002/ana.25879 article EN cc-by Annals of Neurology 2020-08-28
Laura Cif Diane Demailly Jean‐Pierre Lin Katy Barwick Mario Sa and 95 more Lucia Abela Sony Malhotra W.K. Chong Dora Steel Alba Sanchis-Juan Adeline Ngoh Natalie Trump Esther Meyer Xavier Vasques Julia Rankin Meredith W Allain Carolyn Applegate Sanaz Attaripour Isfahani Julien Baleine Bettina Balint Jennifer A. Bassetti Emma L. Baple Kailash P. Bhatia Catherine Blanchet Lydie Bürglen Gilles Cambonie Emilie Chan Seng Sandra Chantot‐Bastaraud Fabienne Cyprien Christine Coubes Vincent d’Hardemare Asif Doja Nathalie Dorison Diane Doummar Marisela E. Dy‐Hollins Ellyn Farrelly David Fitzpatrick Conor Fearon Elizabeth L. Fieg Brent L. Fogel Eva Forman Rachel Fox William A. Gahl Serena Galosi Victoria González Tracey D. Graves Allison Gregory Mark Hallett Harutomo Hasegawa Susan J. Hayflick Ada Hamosh Marie Hully Sandra Jansen Suh Young Jeong Joel B. Krier Sidney Krystal Kishore R. Kumar Chloé Laurencin Hane Lee Gaëtan Lesca Laurence Lion François Timothy Lynch Neil Mahant Julián A. Martínez-Agosto Christophe Milési Kelly A. Mills M. Mondain Hugo Morales‐Briceño John R. Østergaard Swasti Pal J. Carl Pallais Frédérique Pavillard Pierre-Francois Perrigault Andrea Petersen Gustavo Polo Gaëtan Poulen Tuula Rinne Thomas Roujeau Caleb Rogers Agathe Roubertie Michelle Sahagian Élise Schaefer Laila Selim Richard Selway Nutan Sharma Rebecca Signer Ariane Soldatos David A. Stevenson Fiona Stewart Michel Tchan Ishwar C. Verma Bert B A de Vries Jenny L. Wilson Derek A. Wong Raghda Mohamed Hesham Zaitoun Dolly Zhen Anna Znaczko Russell C. Dale Claudio M. de Gusmão Jennifer Friedman

Abstract Heterozygous mutations in KMT2B are associated with an early-onset, progressive and often complex dystonia (DYT28). Key characteristics of typical disease include focal motor features at presentation, evolving through a caudocranial pattern into generalized dystonia, prominent oromandibular, laryngeal cervical involvement. Although KMT2B-related is emerging as one the most common causes early-onset genetic much remains to be understood about full spectrum disease. We describe cohort...

10.1093/brain/awaa304 article EN Brain 2020-08-24
Adam Bournazos Lisa G. Riley Shobhana Bommireddipalli Lesley C. Adès Lauren Akesson and 95 more Mohammad Al-Shinnag Stephen I. Alexander Alison D. Archibald Shanti Balasubramaniam Yemima Berman Victoria Beshay Kirsten Boggs Jasmina Bojadzieva Natasha J. Brown Samantha J. Bryen Michael F. Buckley Belinda Chong Mark R. Davis Ruebena Dawes Martin B. Delatycki Liz Donaldson Lilian Downie Matthew Edwards Matthew Edwards Amanda Engel Lisa Ewans Fathimath Faiz Andrew Fennell Michael Field Mary‐Louise Freckmann Lyndon Gallacher Russell Gear Himanshu Goel Shuxiang Goh Linda Goodwin Bernadette Hanna James Harraway Megan Higgins Gladys Ho Bruce Hopper Ari Horton Matthew F. Hunter Aamira Huq Sarah Josephi‐Taylor Himanshu Joshi Edwin P. Kirk Emma Krzesinski Kishore R. Kumar Frances A. Lemckert Richard J. Leventer Suzanna Lindsey-Temple Sebastian Lunke Alan Ma Steven Macaskill Amali Mallawaarachchi Melanie A. Marty Justine E. Marum Hugh J. McCarthy Manoj P. Menezes Alison McLean Di Milnes Shekeeb S. Mohammad David Mowat Aram Niaz Elizabeth E. Palmer Chirag Patel Chirag Patel Dean Phelan Jason Pinner Sulekha Rajagopalan Matthew Regan Jonathan Rodgers Miriam Rodrigues Richard Roxburgh Rani Sachdev Tony Roscioli Ruvishani Samarasekera Sarah A. Sandaradura Elena Savva Tim Schindler Margit Shah Ingrid Sinnerbrink Janine Smith Richard J. Smith Amanda Springer Zornitza Stark Samuel P. Strom Carolyn M. Sue Kenneth Tan Tiong Yang Tan Esther Tantsis Michel Tchan Bryony A. Thompson Alison H. Trainer Karin van Spaendonck‐Zwarts Rebecca Walsh Linda Warwick Stephanie White Susan M. White Mark Williams

10.1016/j.gim.2021.09.001 article EN Genetics in Medicine 2021-11-30

<h3>Background and Objectives</h3> Mitochondrial diseases (MDs) are the commonest group of heritable metabolic disorders. Phenotypic diversity can make molecular diagnosis challenging, causative genetic variants may reside in either mitochondrial or nuclear DNA. A single comprehensive diagnostic test would be highly useful transform field. We applied whole-genome sequencing (WGS) to evaluate variant detection rate capacity this technology with a view simplifying improving MD pathway....

10.1212/wnl.0000000000200745 article EN cc-by-nc-nd Neurology 2022-05-31
Riccardo Currò Natalia Dominik Stefano Facchini Elisa Vegezzi Roisin Sullivan and 95 more Valentina Galassi Deforie Gorka Fernández‐Eulate Andreas Traschütz Salvatore Rossi Matteo Garibaldi Mariusz Kwarciany Franco Taroni Alfredo Brusco Jean-Marc Good Francesca Cavalcanti Simon Hammans Gianina Ravenscroft Richard Roxburgh Inés Albájar Catherine Ashton Nick Beauchamp Sarah J. Beecroft Emilia Bellone José Berciano Petya Bogdanova‐Mihaylova Barbara Borroni Bernard Brais Enrico Bugiardini Catarina Falcão de Campos Aisling Carr Liam Carroll Francesca Castellani Tiziana Cavallaro Patrick F. Chinnery Silvia Colnaghi Giuseppe Cosentino Joana Damásio Soma Das Grazia Devigili Daniela Di Bella D J Dick Alexandra Dürr Amar El-Saddig Jennifer Faber Moreno Ferrarini Massimiliano Filosto Geraint Fuller Salvatore Gallone Chiara Gemelli Marina Grandis John Hardy Channa Hewamadduma Rita Horváth Vincent Huin Daniele Imperiale Pablo Iruzubieta Diego Kaski Andrew King Thomas Klockgether Müge Kovancılar Koç Kishore R. Kumar Thierry Küntzer Nigel G. Laing Matilde Laurá Timothy Lavin Peter Leigh Lea Leonardis Michael P. Lunn Stefania Magri Francesca Magrinelli Maria João Malaquias Michelangelo Mancuso Hadi Manji Sara Massucco John McConville Renato P. Munhoz Sara Nagy Alain Ndayisaba Andrea H. Németh Luiz Eduardo Novis Johanna Palmio Elena Pegoraro David Pellerin Benedetta Perrone Chiara Pisciotta James M. Polke Malcolm J. Proudfoot Laura Orsi Aleksandar Radunović Nilo Riva Aiko Robert Riccardo Ronco Elena Rossini Alexander M. Rossor Irmak Şahbaz Qais Sa’di Ettore Salsano Alessandro Salvalaggio Lucio Santoro Elisa Sarto

Abstract RFC1 disease, caused by biallelic repeat expansion in RFC1, is clinically heterogeneous terms of age onset, disease progression and phenotype. We investigated the role size influencing clinical variables disease. also assessed presence meiotic somatic instability repeat. In this study, we identified 553 patients carrying expansions measured 392 cases. Pearson’s coefficient was calculated to assess correlation between at onset. A Cox model with robust cluster standard errors adopted...

10.1093/brain/awad436 article EN cc-by Brain 2024-01-09

Most minor head injuries have no immediate neurological sequelae. We present a case where acute symptoms followed very injury, and an underlying genetic cause was identified. highlight the role that injuries, even when innocuous, may in precipitating worsening neurogenetic disorder.

10.1136/pn-2024-004312 article EN Practical Neurology 2025-01-27

ABSTRACT Objective The hereditary spastic‐ataxia spectrum disorders are a group of disabling neurological diseases. traditional genetic testing pathway is complex, multistep and leaves many cases unsolved. We aim to streamline improve this process using long‐read sequencing. Methods developed targeted sequencing strategy with the capacity characterise variation all types sizes within 469 disease‐associated genes, in single assay. applied cohort 34 individuals unsolved spastic‐ataxia. An...

10.1002/acn3.70008 article EN cc-by Annals of Clinical and Translational Neurology 2025-02-25
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