Ariamala Gopalsamy

ORCID: 0000-0003-3704-3891
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About
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Research Areas
  • Hepatitis C virus research
  • Chemical Synthesis and Analysis
  • Quinazolinone synthesis and applications
  • HIV/AIDS drug development and treatment
  • Synthesis and biological activity
  • Protein Kinase Regulation and GTPase Signaling
  • Click Chemistry and Applications
  • Melanoma and MAPK Pathways
  • Cancer Mechanisms and Therapy
  • Cancer-related gene regulation
  • Monoclonal and Polyclonal Antibodies Research
  • Cancer therapeutics and mechanisms
  • Biochemical and Molecular Research
  • Synthesis and Characterization of Heterocyclic Compounds
  • Radical Photochemical Reactions
  • Synthesis and Biological Evaluation
  • Synthesis of Organic Compounds
  • Cytokine Signaling Pathways and Interactions
  • Hepatitis B Virus Studies
  • RNA modifications and cancer
  • Traditional and Medicinal Uses of Annonaceae
  • Bioactive natural compounds
  • Chromatin Remodeling and Cancer
  • Neurogenetic and Muscular Disorders Research
  • Synthesis of Indole Derivatives

AstraZeneca (Brazil)
2025

Medicina
2025

AstraZeneca (United States)
2020-2024

Pfizer (United States)
2011-2020

Pearl River Community College
2000-2010

Princeton University
2004

Indian Institute of Technology Madras
1988-2002

University at Buffalo, State University of New York
1990-1994

This work describes the first rational targeting of tyrosine residues in a protein binding site by small-molecule covalent probes. Specific active mRNA-decapping scavenger enzyme DcpS were modified using reactive sulfonyl fluoride inhibitors. Structure-based molecular design was used to create an alkyne-tagged probe bearing warhead, thus enabling efficient capture from complex proteome. Use competition experiments with diaminoquinazoline inhibitor permitted quantification intracellular...

10.1021/cb5009475 article EN ACS Chemical Biology 2015-01-09

Cytokine signaling is an important characteristic of autoimmune diseases. Many pro-inflammatory cytokines signal through the Janus kinase (JAK)/Signal transducer and activator transcription (STAT) pathway. JAK1 for γ-common chain cytokines, interleukin (IL)-6, type-I interferon (IFN) family, while TYK2 in addition to IFN also plays a role IL-23 IL-12 signaling. Intervention with monoclonal antibodies (mAbs) or inhibitors has demonstrated efficacy Phase III psoriasis, psoriatic arthritis,...

10.1021/acs.jmedchem.8b00917 article EN Journal of Medicinal Chemistry 2018-08-16

Irreversible enzyme inhibitors and covalent chemical biology probes often utilize the reaction of a protein cysteine residue with an appropriately positioned electrophile (e.g., acrylamide) on ligand template. However, residues are not always available for site-specific labeling, therefore new approaches needed to expand toolkit appropriate electrophiles ("warheads") that target alternative amino acids. We previously described rational targeting tyrosine in active site (the mRNA decapping...

10.1021/acschembio.7b00403 article EN ACS Chemical Biology 2017-07-18

A novel series of HCV NS5B RNA-dependent RNA polymerase inhibitors containing a pyrano[3,4-b]indole scaffold is described leading to the discovery compound 16, highly potent and selective inhibitor that active in replicon system.

10.1021/jm0401255 article EN Journal of Medicinal Chemistry 2004-11-19

Heat shock protein 90 (Hsp90) is a molecular chaperone that responsible for activating many signaling proteins and promising target in tumor biology. We have identified small-molecule benzisoxazole derivatives as Hsp90 inhibitors. Crystallographic studies show these compounds bind the ATP binding pocket interacting with Asp93. Structure based optimization led to identification of potent analogues, such 13, good biochemical profiles.

10.1021/jm701385c article EN Journal of Medicinal Chemistry 2008-01-16

Interleukin-17A (IL-17A) is a principal driver of multiple inflammatory and immune disorders. Antibodies that neutralize IL-17A or its receptor (IL-17RA) deliver efficacy in autoimmune diseases, but no small-molecule antagonists have yet progressed into clinical trials. Investigation series linear peptide ligands to characterization their binding site has enabled the design novel macrocyclic are themselves potent antagonists.

10.1038/srep30859 article EN cc-by Scientific Reports 2016-08-16

Sickle cell disease (SCD) is a genetic disorder caused by single point mutation (β6 Glu → Val) on the β-chain of adult hemoglobin (HbA) that results in sickled (HbS). In deoxygenated state, polymerization HbS leads to sickling red blood cells (RBC). Several downstream consequences and RBC include vaso-occlusion, hemolytic anemia, stroke. We report design noncovalent modulator HbS, clinical candidate PF-07059013 (23). The seminal hit molecule was discovered virtual screening confirmed through...

10.1021/acs.jmedchem.0c01518 article EN publisher-specific-oa Journal of Medicinal Chemistry 2020-12-24

With high-throughput screening, substituted dibenzo[c,f][2,7]naphthyridine 1 was identified as a novel potent and selective phosphoinositide-dependent kinase-1 (PDK-1) inhibitor. Various regions of the lead molecule were explored to understand SAR requirement for this scaffold. The crystal structure with kinase domain PDK-1 confirmed binding in active site. key interaction site residues, observed SAR, biological profile are discussed detail.

10.1021/jm070851i article EN Journal of Medicinal Chemistry 2007-10-17

Through high throughput screening, substituted proline sulfonamide 6 was identified as HCV NS5b RNA-dependent RNA polymerase inhibitor. Optimization of various regions the lead molecule resulted in compounds that displayed good potency and selectivity. The crystal structure complex confirmed binding near active site region. optimization approach SAR are discussed detail.

10.1021/jm060168g article EN Journal of Medicinal Chemistry 2006-05-06

Inhibitor of secreted frizzled related protein-1 (sFRP-1) would be a novel potential osteogenic agent, since loss sFRP-1 affects osteoblast proliferation, differentiation, and activity, resulting in improved bone mineral density, quality, strength. We have identified small molecule diarylsulfone sulfonamide derivatives as inhibitors. Structure-activity relationship generated for various regions the scaffold was utilized to improve biochemical profile, identification potent selective...

10.1021/jm801069w article EN Journal of Medicinal Chemistry 2008-12-03

A new solid-phase synthesis of various substituted 2-amino-4(1H)-quinazolinones from a resin bound amine component is described. The was readily converted to the corresponding polymer S-methylthiopseudourea. Condensation with different isatoic anhydrides afforded 2-amino-4(1H)-quinazolinone derivatives. method amenable for combinatorial library generation.

10.1021/cc000017d article EN Journal of Combinatorial Chemistry 2000-05-31

ABSTRACT A novel nonnucleoside inhibitor of hepatitis C virus (HCV) RNA-dependent RNA polymerase (RdRp), [(1 R )-5-cyano-8-methyl-1-propyl-1,3,4,9-tetrahydropyano[3,4-b]indol-1-yl] acetic acid (HCV-371), was discovered through high-throughput screening followed by chemical optimization. HCV-371 displayed broad inhibitory activities against the NS5B RdRp enzyme, with 50% concentrations ranging from 0.3 to 1.8 μM for 90% isolates derived HCV genotypes 1a, 1b, and 3a. showed no activity a panel...

10.1128/aac.48.12.4813-4821.2004 article EN Antimicrobial Agents and Chemotherapy 2004-11-24
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