A5115402251- Plant Disease Resistance and Genetics
- Botanical Studies and Applications
- Phytochemical and Pharmacological Studies
- Soybean genetics and cultivation
- Genomics and Phylogenetic Studies
- Chromosomal and Genetic Variations
- Legume Nitrogen Fixing Symbiosis
- Lipid metabolism and biosynthesis
- Phytoestrogen effects and research
- Plant Genetic and Mutation Studies
- Plant Pathogens and Fungal Diseases
- Medicinal plant effects and applications
Engelhardt Institute of Molecular Biology
2024-2025
Sechenov University
2024-2025
1IntroductionSea buckthorn (Hippophae rhamnoides L.) is a woody oil tree known for its fruits, which are rich source of bioactive compounds, including carotenoids and flavonoids (Ciesarova et al., 2020; Mihal 2023). In addition, the unique fatty acid composition fruit pulp oil, especially high content omega-7 monounsaturated palmitoleic acid, rare in plants, contributes to nutritional benefits products (Sola Marsinach Cuenca, 2019). this regard, sea used medicine, cosmetics, nutraceuticals...
Flax is an important crop grown for seed and fiber. chromosome number 2n = 30, its genome size about 450–480 Mb. To date, the genomes of several flax varieties have been sequenced assembled. However, obtained assemblies are still far from telomere-to-telomere (T2T) level. We variety K-3018 on Oxford Nanopore Technologies (ONT) platform 57.7 Gb R10 simplex reads with N50 18.4 kb (~120× coverage). ONT longer than 50 were kept as ultra-long ones (~10× coverage), rest corrected using HERRO model...
KAS II (β-ketoacyl-acyl carrier protein (ACP) synthases II), FAT (fatty acid thioesterases), SAD (stearoyl-ACP desaturase), and FAD desaturases) are the vital gene families involved in fatty (FA) synthesis Hippophae rhamnoides L. However, information on number location of these genes which ones key to formation FAs fruit seeds pulp was not complete. Our study aimed solve this issue using available genomic sequences transcriptome data that we obtained. We compared sea buckthorn with those...
Colletotrichum lini is a pathogenic fungus that infects flax and causes significant yield losses. In this study, we assembled the genomes of four highly virulent C. strains using Oxford Nanopore Technologies (ONT, R10.4.1 flow cells) Illumina platforms. The performance two tools developed for telomere-to-telomere (T2T) genome assembly was compared: Verkko Hifiasm. Prior to assembly, ONT reads were corrected HERRO algorithm. generated assemblies high completeness but low contiguity, while...