Ofir Shorer

ORCID: 0009-0009-5978-9580
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About
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Research Areas
  • Cancer Immunotherapy and Biomarkers
  • Single-cell and spatial transcriptomics
  • CAR-T cell therapy research
  • Immune Cell Function and Interaction
  • Calcium signaling and nucleotide metabolism
  • Immune cells in cancer
  • Cytomegalovirus and herpesvirus research
  • Adenosine and Purinergic Signaling
  • Synthesis and Biological Evaluation

Technion – Israel Institute of Technology
2023-2025

A central problem in cancer immunotherapy with immune checkpoint blockade (ICB) is the development of resistance, which affects 50% patients metastatic melanoma 1,2 . T cell exhaustion, resulting from chronic antigen exposure tumour microenvironment, a major driver ICB resistance 3 Here, we show that CD38, an ecto-enzyme involved nicotinamide adenine dinucleotide (NAD + ) catabolism, highly expressed exhausted CD8 cells and associated resistance. Tumour-derived CD38 hi are dysfunctional,...

10.1101/2024.02.12.579184 preprint EN cc-by-nc-nd bioRxiv (Cold Spring Harbor Laboratory) 2024-02-14

Abstract T cell exhaustion is a major driver of immune checkpoint blockade (ICB) resistance and clinically effective strategies to prevent or reverse restore ICB sensitivity are lacking. CD38, an ecto-enzyme involved in NAD+ catabolism, highly expressed exhausted CD8+ cells human melanoma, yet its role remains be elucidated. Here we show that CD38+CD8+ enriched during tumor progression following unsuccessful treatment strongly associated with melanoma. Chronic TCR activation type I...

10.1158/1538-7445.genfunc25-b034 article EN Cancer Research 2025-03-11

Metabolism of immune cells in the tumor microenvironment (TME) plays a critical role cancer patient response to checkpoint inhibitors (ICI). Yet, metabolic characterization TME patients treated with ICI is lacking. To bridge this gap we performed semi-supervised analysis ∼1700 genes using single-cell RNA-seq data > 1 million from ∼230 samples ICI. When clustering based on their gene expression, found that similar immunological cellular states are different states. Most importantly,...

10.1016/j.isci.2023.108188 article EN cc-by-nc-nd iScience 2023-10-12

<h3>Background</h3> Terminally exhausted CD8+ T cells, resulting from chronic antigen exposure in the tumor microenvironment, are defined by loss of effector function, decreased proliferative potential, and associated with limited response to immune checkpoint blockade (ICB).<sup>1</sup> CD38 is an ecto-enzyme, involved NAD+ catabolism.<sup>2</sup> that was shown be expressed terminally cells melanoma correlate lack ICB,<sup>3</sup> although its specific role cell exhaustion therapeutic...

10.1136/jitc-2023-sitc2023.0561 article EN cc-by-nc Regular and Young Investigator Award Abstracts 2023-10-31

Despite the crucial role of T cell clones in anti-tumor activity, their characterization and association with clinical outcome following immune checkpoint inhibitors (ICI) is lacking. Here we analyzed paired single-cell RNA-sequencing/T-cell receptor sequencing 767,606 cells from 460 samples spanning 6 cancer types. We found a robust signature response based on expanded CD8+&gt; that differentiates between responders non-responders. Analysis persistent showed transcriptional changes are...

10.1101/2024.09.25.614877 preprint EN bioRxiv (Cold Spring Harbor Laboratory) 2024-09-27

Abstract Metabolism of immune cells in the tumor microenvironment (TME) plays a critical role cancer patient response to checkpoint inhibitors (ICI). Yet, metabolic characterization TME patients treated with ICI is lacking. To bridge this gap we performed semi-supervised analysis ∼1700 genes using single-cell RNA-seq data &gt;1 million from ∼230 and blood samples ICI. When clustering based on their gene expression, found that similar immunological states are different states. Most...

10.1101/2023.04.21.537496 preprint EN bioRxiv (Cold Spring Harbor Laboratory) 2023-04-21
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