Manuela Oliveira

ORCID: 0000-0001-5785-7521
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About
Contact & Profiles
Research Areas
  • Allergic Rhinitis and Sensitization
  • Indoor Air Quality and Microbial Exposure
  • Plant Pathogens and Fungal Diseases
  • Antifungal resistance and susceptibility
  • Air Quality and Health Impacts
  • Mycotoxins in Agriculture and Food
  • Horticultural and Viticultural Research
  • Plant Reproductive Biology
  • Lichen and fungal ecology
  • Forensic and Genetic Research
  • Asthma and respiratory diseases
  • Gut microbiota and health
  • Fungal Infections and Studies
  • Genomics and Phylogenetic Studies
  • Plant Physiology and Cultivation Studies
  • Identification and Quantification in Food
  • Molecular Biology Techniques and Applications
  • Respiratory and Cough-Related Research
  • Chromosomal and Genetic Variations
  • Mathematics Education and Teaching Techniques
  • Odor and Emission Control Technologies
  • Genomic variations and chromosomal abnormalities
  • Bacteriophages and microbial interactions
  • Bacillus and Francisella bacterial research
  • Powdery Mildew Fungal Diseases

i3S - Instituto de Investigação e Inovação em Saúde, Universidade do Porto
2015-2024

Cooperativa de Ensino Superior Politécnico e Universitário
2024

IPO Porto
2014-2023

Universidade do Porto
2012-2023

Pontifícia Universidade Católica do Rio Grande do Sul
2020

Universidade Tecnológica Federal do Paraná
2013-2018

Universidade Federal Rural de Pernambuco
2014

Universidade Estadual de Londrina
2013

Centro Hospitalar Tondela-Viseu
2013

Instituto de Biologia Molecular e Celular
2004-2009

David Danko Daniela Bezdan Evan E. Afshin Sofia Ahsanuddin Chandrima Bhattacharya and 95 more Daniel Butler Kern Rei Chng Daisy Donnellan Jochen Hecht Katelyn Jackson Katerina Kuchin Mikhail Karasikov Abigail Lyons Lauren Mak Dmitry Meleshko Harun Mustafa Beth Mutai Russell Y. Neches Amanda Hui Qi Ng Olga Nikolayeva Tatyana Nikolayeva Eileen Png Krista Ryon Jorge L. Sánchez Heba Shaaban Maria A. Sierra Dominique Thomas Ben Young Omar O. Abudayyeh Josue Alicea Malay Bhattacharyya Ran Blekhman Eduardo Castro‐Nallar A Cañas Aspassia D. Chatziefthimiou Robert W. Crawford Francesca De Filippis Youping Deng Christelle Desnues Emmanuel Dias‐Neto Marius Dybwad Eran Elhaik Danilo Ercolini Alina Frolova Dennis Gankin Jonathan S. Gootenberg Alexandra B. Graf David C. Green Iman Hajirasouliha Jaden J. A. Hastings Mark Hernandez Gregorio Iraola Soojin Jang André Kahles Frank J. Kelly Kaymisha Knights Nikos C. Kyrpides Paweł P. Łabaj Patrick K. H. Lee Marcus H. Y. Leung Per O. Ljungdahl Gabriella Mason-Buck Ken McGrath Cem Meydan Emmanuel F. Mongodin Milton Ozório Moraes Niranjan Nagarajan Marina Nieto‐Caballero Houtan Noushmehr Manuela Oliveira Stephan Ossowski Olayinka Osuolale Orhan Özcan David Páez-Espino Nicolás Rascovan Hugues Richard Gunnar Rätsch Lynn M. Schriml Torsten Semmler Uğur Sezerman Leming Shi Tieliu Shi Rania Siam Le Huu Song Haruo Suzuki Denise Syndercombe Court Scott Tighe Xinzhao Tong Klas I. Udekwu Juan A. Ugalde Brandon Valentine Dimitar Vassilev Elena Vayndorf Thirumalaisamy P. Velavan Jun Wu María Mercedes Zambrano Jifeng Zhu Sibo Zhu Christopher E. Mason Natasha Abdullah

We present a global atlas of 4,728 metagenomic samples from mass-transit systems in 60 cities over 3 years, representing the first systematic, worldwide catalog urban microbial ecosystem. This provides an annotated, geospatial profile strains, functional characteristics, antimicrobial resistance (AMR) markers, and genetic elements, including 10,928 viruses, 1,302 bacteria, 2 archaea, 838,532 CRISPR arrays not found reference databases. identified 4,246 known species microorganisms consistent...

10.1016/j.cell.2021.05.002 article EN cc-by Cell 2021-05-26
Kern Rei Chng Chenhao Li Denis Bertrand Amanda Hui Qi Ng Junmei Samantha Kwah and 95 more Hwee Meng Low Chengxuan Tong Maanasa Natrajan Michael Hongjie Zhang Licheng Xu Karrie Kwan Ki Ko Eliza Xin Pei Ho Tamar V. Av‐Shalom Jeanette Teo Chiea Chuen Khor David Danko Daniela Bezdan Ebrahim Afshinnekoo Sofia Ahsanuddin Chandrima Bhattacharya Daniel Butler Kern Rei Chng Francesca De Filippis Jochen Hecht André Kahles Mikhail Karasikov Nikos C. Kyrpides Marcus H. Y. Leung Dmitry Meleshko Harun Mustafa Beth Mutai Russell Y. Neches Amanda Hui Qi Ng Marina Nieto‐Caballero Olga Nikolayeva Tatyana Nikolayeva Eileen Png Jorge L. Sánchez Heba Shaaban Maria A. Sierra Xinzhao Tong Ben Young Josue Alicea Malay Bhattacharyya Ran Blekhman Eduardo Castro‐Nallar A Cañas Aspassia D. Chatziefthimiou Robert W. Crawford Youping Deng Christelle Desnues Emmanuel Dias‐Neto Daisy Donnellan Marius Dybwad Eran Elhaik Danilo Ercolini Alina Frolova Alexandra B. Graf David C. Green Iman Hajirasouliha Mark Hernandez Gregorio Iraola Soojin Jang Angela Jones Frank J. Kelly Kaymisha Knights Paweł P. Łabaj Patrick K. H. Lee Levy Shawn Per O. Ljungdahl Abigail Lyons Gabriella Mason-Buck Ken McGrath Emmanuel F. Mongodin Milton Ozório Moraes Niranjan Nagarajan Houtan Noushmehr Manuela Oliveira Stephan Ossowski Olayinka Osuolale Orhan Özcan David Páez-Espino Nicolás Rascovan Hugues Richard Gunnar Rätsch Lynn M. Schriml Torsten Semmler Uğur Sezerman Leming Shi Le Huu Song Haruo Suzuki Denise Syndercombe Court Dominique Thomas Scott Tighe Klas I. Udekwu Juan A. Ugalde Brandon Valentine Dimitar Vassilev Elena Vayndorf Thirumalaisamy P. Velavan

Although disinfection is key to infection control, the colonization patterns and resistomes of hospital-environment microbes remain underexplored. We report first extensive genomic characterization microbiomes, pathogens antibiotic resistance cassettes in a tertiary-care hospital, from repeated sampling (up 1.5 years apart) 179 sites associated with 45 beds. Deep shotgun metagenomics unveiled distinct ecological niches genes characterized by biofilm-forming human-microbiome-influenced...

10.1038/s41591-020-0894-4 article EN cc-by Nature Medicine 2020-06-01

The Metagenomics and Metadesign of the Subways Urban Biomes (MetaSUB) International Consortium is a novel, interdisciplinary initiative comprised experts across many fields, including genomics, data analysis, engineering, public health, architecture. ultimate goal MetaSUB to improve city utilization planning through detection, measurement, design metagenomics within urban environments. Although continual measures occur for temperature, air pressure, weather, human activity, longitudinal,...

10.1186/s40168-016-0168-z article EN cc-by Microbiome 2016-06-01

Allergic rhinitis and asthma are major public health concerns economic burdens worldwide. However, little is known about nasal bacteriome dysbiosis during allergic rhinitis, alone or associated with comorbidity. To address this knowledge gap we applied 16S rRNA high-throughput sequencing to 347 samples from participants (AS = 12), (AR 53), (ARAS 183) healthy controls (CT 99). One three of the most abundant phyla, five seven dominant genera differed significantly (p < 0.021) between AS, AR...

10.3390/microorganisms11030683 article EN cc-by Microorganisms 2023-03-07

Background The behavior of bees results in important natural products such as honey, propolis, wax, beeswax, bee pollen, royal jelly and venom. Sometimes, the terms geopropolis cerumen are used interchangably despite some diferences. Objective. To discuss commonalities differences between substances referred to respectively provide an overview their bioactvities, medicinal uses also chemical composition assist with a more consistent use these into future. Methodology. Scientific articles...

10.56083/rcv5n1-017 article EN cc-by-nc Revista Contemporânea 2025-01-10

Pregnancy is a period of significant biopsychosocial changes. Carrying fetus involves multiple aspects and can impact quality life. The female body adapts to ensure the necessary conditions for fetal development, including increased capacity cardiovascular, respiratory, urinary systems, among others. However, this also marked by complications potential pregnancy-related diseases that be prevented or treated. Physical exercise primary tool strengthening preventing pathological conditions. In...

10.69849/revistaft/pa10202504121331 article EN Revista fisio&terapia. 2025-04-12
David Danko Daniela Bezdan Ebrahim Afshinnekoo Sofia Ahsanuddin Chandrima Bhattacharya and 92 more Daniel Butler Kern Rei Chng Daisy Donnellan Jochen Hecht Katelyn Jackson Katerina Kuchin Mikhail Karasikov Abigail Lyons Lauren Mak Dmitry Meleshko Harun Mustafa Beth Mutai Russell Y. Neches Amanda Hui Qi Ng Olga Nikolayeva Tatyana Nikolayeva Eileen Png Krista Ryon Jorge L. Sanchez Heba Shaaban Maria A. Sierra Dominique Thomas Ben Young Omar O. Abudayyeh Josue Alicea Malay Bhattacharyya Ran Blekhman Eduardo Castro‐Nallar A Cañas Aspassia D. Chatziefthimiou Robert W. Crawford Francesca De Filippis Youping Deng Christelle Desnues Emmanuel Dias‐Neto Marius Dybwad Eran Elhaik Danilo Ercolini Alina Frolova Dennis Gankin Jonathan S. Gootenberg Alexandra B. Graf David C. Green Iman Hajirasouliha Mark Hernandez Gregorio Iraola Soojin Jang André Kahles Frank J. Kelly Kaymisha Knights Nikos C. Kyrpides Paweł P. Łabaj Patrick K. H. Lee Marcus H. Y. Leung Per O. Ljungdahl Gabriella Mason-Buck Ken McGrath Cem Meydan Emmanuel F. Mongodin Milton Ozório Moraes Niranjan Nagarajan Marina Nieto‐Caballero Houtan Noushmehr Manuela Oliveira Stephan Ossowski Olayinka Osuolale Orhan Özcan David Páez-Espino Nicolás Rascovan Hugues Richard Gunnar Rätsch Lynn M. Schriml Torsten Semmler Uğur Sezerman Leming Shi Tieliu Shi Le Huu Song Haruo Suzuki Denise Syndercombe Court Scott Tighe Xinzhao Tong Klas I. Udekwu Juan A. Ugalde Brandon Valentine Dimitar Vassilev Elena Vayndorf Thirumalaisamy P. Velavan Jun Wu María Mercedes Zambrano Jifeng Zhu Sibo Zhu Christopher E. Mason

Abstract We have created a global atlas of 4,728 metagenomic samples from mass-transit systems in 60 cities across 3 years. This is the first systematic, worldwide study cataloging urban microbial ecosystem. identify taxonomically-defined microorganisms collected three provides an annotated, geospatial profile strains, functional characteristics AMR markers, and novel genetic elements, including 10,928 viral, 1302 bacteria, 2 archaea species. 4,424 species consistent “core” 31 found nearly...

10.1101/724526 preprint EN cc-by bioRxiv (Cold Spring Harbor Laboratory) 2019-08-05

Allergic rhinitis and asthma are two of the most common chronic respiratory diseases in developed countries have become a major public health concern. Substantial evidence has suggested strong link between allergy upper airway dysbacteriosis, but role oral bacteriota is still poorly understood. Here we used 16S rRNA massive parallel sequencing to characterize bacteriome 344 individuals with allergic (AR), (ARAS), (AS) healthy controls (CT). Four abundant (&amp;gt;2%) phyla (Actinobacteriota,...

10.3389/fmicb.2023.1197135 article EN cc-by Frontiers in Microbiology 2023-06-07
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