A5007991065- Plant Gene Expression Analysis
- Plant Molecular Biology Research
- Plant Reproductive Biology
- Plant biochemistry and biosynthesis
- Photosynthetic Processes and Mechanisms
- Horticultural and Viticultural Research
- Plant-Microbe Interactions and Immunity
- Plant Physiology and Cultivation Studies
- Plant Stress Responses and Tolerance
- Botanical Studies and Applications
- Oil Palm Production and Sustainability
- Plant Pathogens and Fungal Diseases
- Postharvest Quality and Shelf Life Management
- Fluoride Effects and Removal
- Neurological Disease Mechanisms and Treatments
- Biological and pharmacological studies of plants
- Lignin and Wood Chemistry
- MicroRNA in disease regulation
- Ferroptosis and cancer prognosis
- Plant Parasitism and Resistance
- Lipid metabolism and biosynthesis
- Plant nutrient uptake and metabolism
- Aquaculture disease management and microbiota
- interferon and immune responses
- Genetic Mapping and Diversity in Plants and Animals
Chinese Academy of Sciences
2022-2025
Wuhan Botanical Garden
2022-2025
Harbin Engineering University
2024-2025
Central South University
2019-2024
Central South University of Forestry and Technology
2019-2024
University of Chinese Academy of Sciences
2024
Shanghai Zhangjiang Laboratory
2024
Wuchang University of Technology
2022-2024
Zhejiang Chinese Medical University
2024
Nanjing Normal University
2019-2024
The MYB family is one of the largest families transcription factors in plants. Although, some MYBs were reported to play roles secondary metabolism, no comprehensive study Chinese pear (Pyrus bretschneideri Rehd.) has been reported. In present study, we performed genome-wide analysis genes pear, designated as PbMYBs, including analyses their phylogenic relationships, structures, chromosomal locations, promoter regions, GO annotations, and collinearity. A total 129 PbMYB identified genome...
Peroxidases (PRXs) are widely existed in various organisms and could be divided into different types according to their structures functions. Specifically, the Class III Peroxidase, a plant-specific multi-gene family, involves many physiological processes, such as metabolism of auxin, extension thickening cell wall, well formation lignin. By searching pear genome database, 94 non-redundant PRXs from Pyrus bretschneideri (PbPRXs) were identified. Subsequently, analysis phylogenetic...
Currently, Alzheimer's disease (AD) cannot be treated effectively. Mesenchymal stem cells (MSCs)-derived extracellular vesicles (EVs) (MSC-EVs) exhibit therapeutic effects on many diseases. This study investigated the mechanism of bone marrow MSC-EVs (BM-MSC-EVs) in a rat model AD. The cognitive function, amyloid-β (Aβ) plaques, Aβ deposition areas and levels Aβ1-42, decomposition-related factors (NEP IDE), inflammatory cytokines BM-MSC-EVs-treated AD rats were measured. effect BM-MSC-EVs...
Bletilla striata, commonly known as baiji, is a species used in traditional Chinese medicine; it highly regarded for its medicinal applications and therefore has high economic value. Here, we report high-quality haplotype-resolved genome of B. haplotype A (2.37 Gb, with scaffold N50 146.39 Mb contig 1.65 Mb) B (2.43 150.22 1.66 Mb), assembled from high-fidelity (HiFi) reads chromosome conformation capture (Hi-C) reads. We find evidence that striata undergone two whole-genome duplication...
Abstract Background Most disease resistance (R) genes in plants encode proteins that contain leucine-rich-repeat (LRR) and nucleotide-binding site (NBS) domains, which belong to the NBS-LRR family. The sequenced genomes of Fusarium wilt-susceptible Vernicia fordii its resistant counterpart, montana , offer significant resources for functional characterization discovery novel tung tree. Results Here, we identified 239 across two tree genomes: 90 V. 149 . Five VmNBS-LRR paralogous were...
Rosa banksiae, known as Lady Banks' rose, is a perennial ornamental crop and versatile herb in traditional Chinese medicine. Given the lack of genomic resources, we assembled HiFi Nanopore sequencing-derived 458.58 Mb gap-free telomere-to-telomere high-quality R. banksiae genome with scaffold N50 = 63.90 Mb. The exhibited no lineage-specific whole-genome duplication compared other Rosaceae. phylogenomic analysis 13 Rosaceae Arabidopsis through comparative genomics study showed that numerous...
Abstract Although the strigolactone (SL) signaling pathway and SL-mediated anthocyanin biosynthesis have been reported, molecular association between SL remains unclear. In this study, we identified signal transduction associated with crosstalk gibberellin (GA) in apple (Malus × domestica). ELONGATED HYPOCOTYL5 (HY5) acts as a key node integrating biosynthesis, SL-response factor AGAMOUS-LIKE MADS-BOX9 (AGL9) promotes by activating HY5 transcription. The repressor SUPPRESSOR OF MAX2 1-LIKE8...
The pear (Pyrus spp.) is well known for diverse flavors, textures, and global horticultural importance. However, the genetic diversity responsible its extensive phenotypic variations remains largely unexplored. Here, we de novo assembled annotated genomes of maternal (PsbM) paternal (PsbF) lines hybrid 'Yuluxiang' constructed pangenome 1.15 Gb by combining these two with five previously published representing cultivated wild germplasm. Using pangenome, identified 21 224 gene PAVs...
Growth-regulating factors (GRFs) are plant-specific transcription that have important functions in regulating plant growth and development. Previous studies on GRF family members focused either a single or small set of genes. Here, comparative genomic analysis the gene was performed poplar (a model tree species), Arabidopsis for annual herbaceous dicots), grape (one perennial rice monocots) Chinese pear economical fruit crops). In total, 58 genes were identified, 12 (Oryza sativa), 8 (Vitis...
Sucrose synthase (SS) is a key enzyme involved in sucrose metabolism that critical plant growth and development, particularly quality of the fruit. gene families have been identified characterized plants various such as tobacco, grape, rice, Arabidopsis. However, there still lack detailed information about pear. In present study, we performed systematic analysis pear (Pyrus bretschneideri Rehd.) genome reported 30 genes. Subsequently, structure, phylogenetic relationship, chromosomal...
The B-BOX (BBX) proteins have important functions in regulating plant growth and development. In plants, the BBX gene family has been identified several such as rice, Arabidopsis tomato. However, there still lack a genome-wide survey of genes pear.In present study, total 25 were pear (Pyrus bretschneideri Rehd.). Subsequently, phylogenetic relationship, structure, duplication, transcriptome data qRT-PCR conducted on these members. transcript analysis revealed that twelve PbBBX (48%)...
In plants, 4-coumarate:coenzyme A ligases (4CLs), comprising some of the adenylate-forming enzymes, are key enzymes involved in regulating lignin metabolism and biosynthesis flavonoids other secondary metabolites. Although several 4CL-related proteins were shown to play roles metabolism, no comprehensive study on genes pear Rosaceae species has been reported. this study, we identified apple, peach, yangmei, genomes using DNATOOLS software inferred their evolutionary relationships...
MYB transcription factors are widely distributed in the plant kingdom and play key roles regulatory networks governing metabolism biochemical physiological processes.Here, we first determined R2R3-MYB genes five Euphorbiaceae genomes. The three Trp (W) residues from domain (R2) were absolutely conserved, whereas W residue second (R3) was preferentially mutated. R2R3-MYBs clustered into 48 functional subfamilies, of which 34 had both species AtMYBs, four contained only R2R3-MYBs. whole-genome...
Predicting the remaining useful life (RUL) of rolling bearings is crucial for industrial machinery maintenance, non-destructive testing and evaluation (NDT). To address challenges posed by noise interference redundant information, this paper proposes a novel approach utilising residual attention networks multi-scale feature extraction. The method enhances extraction combining shallow deep convolutional layers while employing bidirectional LSTM to capture both short-term long-term...
ABSTRACT Lignified stone cell content is one of the critical factors affecting ‘Dangshansuli’ fruit quality. The function MADS‐box transcription in regulating lignin biosynthesis pear still less. In this study, PbMADS49 gene silencing inhibited and secondary wall development mainly through reducing expression levels monomer polymerisation key enzymes (PbPRX33 PbPRX45). was a transcriptional repressor inhibiting its by binding to CArG element target promoter. Combined with co‐expression...
Bletilla striata, a medicinal orchidaceous plant, is recognized for its significant pharmacological value. However, the lack of comparative metabolomic data across different extraction methods analyzing bioactive components has significantly undervalued application potential B. striata in traditional Chinese medicine market. Using six ultrasound-assisted and UPLC-MS/MS, this study identified 1,945 metabolites extracts. The dominant categories were lipids (51.35%), flavonoids (18.00%),...