Elijah Cole

ORCID: 0000-0001-6623-0966
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About
Contact & Profiles
Research Areas
  • Species Distribution and Climate Change
  • Geographic Information Systems Studies
  • Research Data Management Practices
  • Semantic Web and Ontologies
  • Domain Adaptation and Few-Shot Learning
  • Advanced Image and Video Retrieval Techniques
  • Wildlife Ecology and Conservation
  • Animal Vocal Communication and Behavior
  • Spider Taxonomy and Behavior Studies
  • Multimodal Machine Learning Applications
  • Marine animal studies overview
  • Text and Document Classification Technologies
  • Genomics and Phylogenetic Studies
  • Remote-Sensing Image Classification
  • Machine Learning in Bioinformatics
  • Optical Coherence Tomography Applications
  • Digital Imaging for Blood Diseases
  • Amphibian and Reptile Biology
  • Retinal Diseases and Treatments
  • Underwater Acoustics Research
  • Coral and Marine Ecosystems Studies
  • Date Palm Research Studies
  • Data-Driven Disease Surveillance
  • Machine Learning and Data Classification
  • Machine Learning and Algorithms

Altos Labs
2024-2025

California Institute of Technology
2019-2023

Mathematical Systems & Solutions (United States)
2022-2023

Duke University
2015-2017

Portland State University
2008

Recent self-supervised representation learning techniques have largely closed the gap between supervised and unsupervised on ImageNet classification. While particulars of pretraining are now relatively well understood, field still lacks widely accepted best practices for replicating this success other datasets. As a first step in direction, we study contrastive four diverse large-scale By looking through lenses data quantity, domain, quality, task granularity, provide new insights into...

10.1109/cvpr52688.2022.01434 article EN 2022 IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR) 2022-06-01

Recent progress in self-supervised learning has resulted models that are capable of extracting rich representations from image collections without requiring any explicit label supervision. However, to date the vast majority these approaches have restricted themselves training on standard benchmark datasets such as ImageNet. We argue fine-grained visual categorization problems, plant and animal species classification, provide an informative testbed for learning. In order facilitate this area...

10.1109/cvpr46437.2021.01269 article EN 2022 IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR) 2021-06-01

Appearance information alone is often not sufficient to accurately differentiate between fine-grained visual categories. Human experts make use of additional cues such as where, and when, a given image was taken in order inform their final decision. This contextual readily available many online collections but has been underutilized by existing classifiers that focus solely on making predictions based the contents. We propose an efficient spatio-temporal prior, when conditioned geographical...

10.1109/iccv.2019.00969 article EN 2021 IEEE/CVF International Conference on Computer Vision (ICCV) 2019-10-01

Predicting all applicable labels for a given image is known as multi-label classification. Compared to the standard multi-class case (where each has only one label), it considerably more challenging annotate training data When number of potential large, human annotators find difficult mention image. Furthermore, in some settings detection intrinsically e.g. finding small object instances high resolution images. As result, often plagued by false negatives. We consider hardest version this...

10.1109/cvpr46437.2021.00099 article EN 2022 IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR) 2021-06-01

Journal Article Practices for Social Interaction in the Language-Learning Classroom: Disengagements from Dyadic Task Get access John Hellermann, Hellermann Portland State University Search other works by this author on: Oxford Academic Google Scholar Elizabeth Cole Applied Linguistics, Volume 30, Issue 2, June 2009, Pages 186–215, https://doi.org/10.1093/applin/amn032 Published: 21 October 2008 history Received: 01 May

10.1093/applin/amn032 article EN Applied Linguistics 2008-10-21

The peripheral retina of the human eye offers a unique opportunity for assessment and monitoring ocular diseases. We have developed novel wide-field (>70°) optical coherence tomography system (WF-OCT) equipped with wavefront sensorless adaptive optics (WSAO) enhancing visualization smaller (<25°) targeted regions in retina. iterated WSAO algorithm at speed individual OCT B-scans (~20 ms) by using raw spectral interferograms to calculate optimization metric. Our approach 3 mm beam diameter...

10.1364/boe.8.000016 article EN cc-by Biomedical Optics Express 2016-12-02

Camera traps enable the automatic collection of large quantities image data. Biologists all over world use camera to monitor animal populations. We have recently been making strides towards species classification in trap images. However, as we try expand geographic scope these models are faced with an interesting question: how do train that perform well on new (unseen during training) locations? Can leverage data from other modalities, such citizen science and remote sensing data? In order...

10.48550/arxiv.2004.10340 preprint EN other-oa arXiv (Cornell University) 2020-01-01

Spatial transcriptomics aims to elucidate cell coordination within biological tissues by linking the state of with its local tissue microenvironment. Imaging-based assays are particularly promising for exploring such interdependencies, as they can resolve molecular and cellular features subcellular resolution in three dimensions. Quantification analysis data, however, ultimately depends on ability recognize which molecules belong each cell. Despite computational experimental progress, this...

10.1101/2025.01.02.631135 preprint EN cc-by-nc bioRxiv (Cold Spring Harbor Laboratory) 2025-01-03

Optical coherence tomography (OCT) has revolutionized diagnosis and prognosis of ophthalmic diseases by visualization measurement retinal layers. To speed up the quantitative analysis disease biomarkers, an increasing number automatic segmentation algorithms have been proposed to estimate boundary locations While performance these significantly improved in recent years, a critical question ask is how far we are from theoretical limit OCT performance. In this paper, present Cramèr-Rao lower...

10.1109/tmi.2017.2772963 article EN IEEE Transactions on Medical Imaging 2017-11-13

Optical coherence tomography angiography (OCTA) is a promising technique for non-invasive visualization of vessel networks in the human eye. We debut system capable acquiring wide field-of-view (>70°) OCT angiograms without mosaicking. Additionally, we report on enhancing peripheral microvasculature using wavefront sensorless adaptive optics (WSAO). employed fast WSAO algorithm that enabled correction <2 s by iterating mirror shape at speed B-scans rather than volumes. Also, contrasted ∼7°...

10.1364/ol.42.000017 article EN Optics Letters 2016-12-15

The current standard for large-volume (thousands of cubic meters) zooplankton sampling in the deep sea is MOCNESS, a system multiple opening–closing nets, typically lowered to within 50 m seabed and towed obliquely surface obtain low-spatial-resolution samples that integrate across 10 s meters water depth. SyPRID (Sentry Precision Robotic Impeller Driven) sampler an innovative, deep-rated (6000 m) plankton partners with Sentry Autonomous Underwater Vehicle (AUV) paired, at specified depths...

10.1016/j.dsr2.2016.05.007 article EN cc-by-nc-nd Deep Sea Research Part II Topical Studies in Oceanography 2016-05-20

10.1109/cvpr52733.2024.01686 article EN 2022 IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR) 2024-06-16

Camera traps enable the automatic collection of large quantities image data. Ecologists use camera to monitor animal populations all over world. In order estimate abundance a species from trap data, ecologists need know not just which were seen, but also how many individuals each seen. Object detection techniques can be used find number in image. However, since collect images motion-triggered bursts, simply adding up detections frames is likely lead an incorrect estimate. Overcoming these...

10.48550/arxiv.2105.03494 preprint EN other-oa arXiv (Cornell University) 2021-01-01

Computational sprinting is a class of mechanisms that boost performance but dissipate additional power. We describe architecture in which many, independent chip multiprocessors share power supply and sprints are constrained by the chips’ thermal limits rack’s limits. Moreover, we present computational game, multi-agent perspective on managing sprints. Strategic agents decide whether to sprint based application phases system conditions. The game produces an equilibrium improves task...

10.1145/3014428 article EN ACM Transactions on Computer Systems 2017-01-09

Estimating the geographical range of a species from sparse observations is challenging and important geospatial prediction problem. Given set locations where has been observed, goal to build model predict whether present or absent at any location. This problem long history in ecology, but traditional methods struggle take advantage emerging large-scale crowdsourced datasets which can include tens millions records for hundreds thousands species. In this work, we use Spatial Implicit Neural...

10.48550/arxiv.2306.02564 preprint EN other-oa arXiv (Cornell University) 2023-01-01

Predicting all applicable labels for a given image is known as multi-label classification. Compared to the standard multi-class case (where each has only one label), it considerably more challenging annotate training data When number of potential large, human annotators find difficult mention image. Furthermore, in some settings detection intrinsically e.g. finding small object instances high resolution images. As result, often plagued by false negatives. We consider hardest version this...

10.48550/arxiv.2106.09708 preprint EN other-oa arXiv (Cornell University) 2021-01-01

The goal of habitat suitability mapping is to predict the lo-cations in which a given species could be present. This typically accomplished by statistical models use envi-ronmental variables observation data. relationship between environmental characteristics location and that live there likely quite complex, so deep learning would seem natural use. In practice, are biases training data present obstacles standard approaches. First, large-scale collections consist presence-only data, means we...

10.1109/igarss46834.2022.9883627 article EN IGARSS 2022 - 2022 IEEE International Geoscience and Remote Sensing Symposium 2022-07-17

Species range maps (SRMs) are essential tools for research and policy-making in ecology, conservation, environmental management. However, traditional SRMs rely on the availability of covariates high-quality species location observation data, both which can be challenging to obtain due geographic inaccessibility resource constraints. We propose a novel approach combining millions citizen science observations with textual descriptions from Wikipedia, covering habitat preferences tens thousands...

10.48550/arxiv.2410.10931 preprint EN arXiv (Cornell University) 2024-10-14
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