Azin Saebi

ORCID: 0000-0001-6782-0992
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About
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Research Areas
  • Chemical Synthesis and Analysis
  • Bacterial Genetics and Biotechnology
  • Antibiotic Resistance in Bacteria
  • RNA and protein synthesis mechanisms
  • Monoclonal and Polyclonal Antibodies Research
  • Antimicrobial Peptides and Activities
  • Biochemical and Structural Characterization
  • Microfluidic and Capillary Electrophoresis Applications
  • Click Chemistry and Applications
  • Microbial Natural Products and Biosynthesis
  • Advanced biosensing and bioanalysis techniques
  • Various Chemistry Research Topics
  • Biotin and Related Studies
  • Tuberculosis Research and Epidemiology
  • Cyclopropane Reaction Mechanisms
  • Boron and Carbon Nanomaterials Research
  • Nanocluster Synthesis and Applications
  • Molecular Junctions and Nanostructures
  • Organoboron and organosilicon chemistry
  • Boron Compounds in Chemistry
  • Genetics, Bioinformatics, and Biomedical Research

Massachusetts Institute of Technology
2019-2023

University of California, Los Angeles
2016

Fully synthetic whole proteins in reach Solid-phase peptide synthesis of homogeneous peptides longer than about 50 amino acids has been a long-standing challenge because inefficient coupling and side reactions. Hartrampf et al. used an automated chemistry platform to optimize fast-flow were able produce fully single-domain (see the Perspective by Proulx). The targets included proinsulin enzymes such as barnase version HIV-1 protease containing multiple noncanonical acids. Refolded nearly...

10.1126/science.abb2491 article EN Science 2020-05-28

Few chemical methods exist for the covalent conjugation of two proteins. We report preparation site-specific protein-protein conjugates that arise from sequential cross-coupling cysteine residues on different The method involves synthesis stable palladium-protein oxidative addition complexes (Pd-protein OACs), a process converts nucleophilic into an electrophilic S-aryl-Pd-X unit by taking advantage intramolecular strategy. This is demonstrated proteins up to 83 kDa in size and can be...

10.1021/jacs.0c03143 article EN Journal of the American Chemical Society 2020-05-04

The impermeable outer membrane of Pseudomonas aeruginosa is bypassed by antibacterial proteins known as S-type pyocins. Because their properties, pyocins are investigated a potential new class antimicrobials against infections. Their production and modification, however, remain challenging. To address this limitation, we employed automated fast-flow peptide synthesis for the rapid pyocin S2 import domain. N-terminal domain sequence (PyS2NTD) was synthesized in under 10 h purified to yield...

10.1021/acschembio.2c00862 article EN ACS Chemical Biology 2023-02-23

Pseudomonas aeruginosa is a major bacterial pathogen associated with rising prevalence of antibiotic resistance. We evaluated the resistance mechanisms P. against POL7080, species-specific, first-in-class in clinical trials that targets lipopolysaccharide transport protein LptD. isolated series POL7080-resistant strains mutations two-component sensor gene pmrB .

10.1128/aac.00511-19 article EN cc-by Antimicrobial Agents and Chemotherapy 2019-06-21

<p>Ribosomes produce most proteins of living cells in seconds. Here we report highly efficient chemistry matched with an automated fast-flow instrument for the direct manufacturing peptide chains up to 164 amino acids over 328 consecutive reactions. The machine is rapid - chain elongation complete hours. We demonstrate utility this approach by chemical synthesis nine different protein that represent enzymes, structural units, and regulatory factors. After purification folding,...

10.26434/chemrxiv.11833503 preprint EN cc-by-nc-nd 2020-02-11

Ribosomes produce most proteins of living cells in seconds. Here we report highly efficient chemistry matched with an automated fast-flow instrument for the direct manufacturing peptide chains up to 164 amino acids over 328 consecutive reactions. The machine is rapid - chain elongation complete hours. We demonstrate utility this approach by chemical synthesis nine different protein that represent enzymes, structural units, and regulatory factors. After purification folding, synthetic...

10.26434/chemrxiv.11833503.v1 preprint EN cc-by-nc-nd 2020-02-11

Abstract The impermeable outer membrane of Pseudomonas aeruginosa is bypassed by antibacterial proteins known as S-type pyocins. Because their properties, pyocins are investigated a potential new class antimicrobials against infections. Their production and modification, however, remains challenging. To address this limitation, we employed automated fast-flow peptide synthesis (AFPS) for the rapid pyocin S2 import domain. N-terminal domain sequence (PyS2 NTD ) was synthesized in under 10...

10.1101/2022.11.17.516969 preprint EN cc-by-nc-nd bioRxiv (Cold Spring Harbor Laboratory) 2022-11-17

This work describes select narratives pertaining to undergraduate teaching and mentorship at UCLA Chemistry Biochemistry by Alex Spokoyny his junior colleagues. Specifically, we discuss how individual researchers contributed jump-started multiple research themes since the conception of our laboratory. also several recent innovations in inorganic general chemistry courses taught with a focus nurturing appreciation for creative process sciences including use social media platforms.

10.1515/pac-2020-1007 article EN cc-by-nc-nd Pure and Applied Chemistry 2021-02-01

Pseudomonas aeruginosa is a major bacterial pathogen for which there rising antibiotic resistance. We evaluated the resistance mechanisms of P. against POL7080, species-specific, first-in-class in phase 3 clinical trials targeting lipopolysaccharide transport protein LptD. found mutations two-component regulator pmrB . Genome-wide transcriptomics and confocal microscopy studies together suggest that POL7080 vulnerable to same described previously polymyxins, including colistin, involve lipid...

10.1101/571224 preprint EN bioRxiv (Cold Spring Harbor Laboratory) 2019-03-08
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