Dominik Vogel

ORCID: 0000-0001-6797-9696
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Research Areas
  • Viral Infections and Outbreaks Research
  • Bacillus and Francisella bacterial research
  • Viral Infections and Vectors
  • Hepatitis B Virus Studies
  • Fire effects on ecosystems
  • Viral gastroenteritis research and epidemiology
  • Mosquito-borne diseases and control
  • Plant Virus Research Studies
  • Virus-based gene therapy research
  • Bacteriophages and microbial interactions
  • Photosynthetic Processes and Mechanisms
  • Aquatic and Environmental Studies
  • Protein purification and stability
  • Hemoglobinopathies and Related Disorders
  • Water Resources and Management
  • Plant and fungal interactions
  • Legume Nitrogen Fixing Symbiosis
  • Influenza Virus Research Studies
  • Hemoglobin structure and function
  • Horticultural and Viticultural Research
  • Botany and Plant Ecology Studies
  • Soil and Environmental Studies
  • Neonatal Health and Biochemistry

Bernhard Nocht Institute for Tropical Medicine
2017-2024

Technische Universität Berlin
2013

University of Regensburg
1975-1981

University of Stuttgart
1981

University of Milan
1981

European Molecular Biology Organization
1981

Abstract The Bunyavirales order contains several emerging viruses with high epidemic potential, including Severe fever thrombocytopenia syndrome virus (SFTSV). lack of medical countermeasures, such as vaccines and antivirals, is a limiting factor for the containment any outbreak. To develop antivirals profound understanding viral replication process essential. L protein bunyaviruses multi-functional multi-domain performing both transcription genome and, therefore, an ideal drug target. We...

10.1093/nar/gkaa253 article EN cc-by-nc Nucleic Acids Research 2020-04-03

Abstract Severe fever with thrombocytopenia syndrome virus (SFTSV) is a phenuivirus that has rapidly become endemic in several East Asian countries. The large (L) protein of SFTSV, which includes the RNA-dependent RNA polymerase (RdRp), responsible for catalysing viral genome replication and transcription. Here, we present 5 cryo-electron microscopy (cryo-EM) structures L states process, from pre-initiation to late-stage elongation, at resolution up 2.6 Å. We identify how binds 5′ hook-like...

10.1093/nar/gkac1249 article EN cc-by-nc Nucleic Acids Research 2023-01-18

Lassa virus is endemic in West Africa and can cause severe hemorrhagic fever. The viral L protein transcribes replicates the RNA genome via its RNA-dependent polymerase activity. Here, we present nine cryo-EM structures of apo-, promoter-bound pre-initiation active synthesis states. We characterize distinct binding pockets for conserved 3' 5' promoter RNAs show how full-promoter induces a conformation. In apo- early elongation states, endonuclease inhibited by two peptides, whereas state it...

10.1038/s41467-021-27305-5 article EN cc-by Nature Communications 2021-12-02

Crocodilian hemoglobin has a high intrinsic oxygen affinity but does not react with those organic phosphate esters that normally control the of blood in higher vertebrates.Instead, its is greatly lowered by CO,.The present study was undertaken to determine nature COZ binding crocodilian species, Caiman, both qualitatively and quantitatively.The following parameters were measured: (a) carbamino compounds deoxy-and oxyhemoglobin, (b) effect (at constant pH) on Caiman hemoglobin, (c) total CO,...

10.1016/s0021-9258(19)68861-7 article EN cc-by Journal of Biological Chemistry 1981-08-01

The L protein of arena- and bunyaviruses is structurally functionally related to the orthomyxovirus polymerase complex. It plays a central role in viral life cycle, as it replicates virus genome generates mRNA via cap-snatching mechanism. Here, we aimed biochemically characterize Lassa virus, human-pathogenic arenavirus endemic West Africa. Full-length 250-kDa was expressed using baculovirus expression system. A low-resolution structure calculated from small-angle X-ray scattering data...

10.1074/jbc.ra118.006973 article EN cc-by Journal of Biological Chemistry 2019-03-30

Cap-snatching was first discovered in influenza virus. Structures of the involved domains virus polymerase, namely endonuclease PA subunit and cap-binding domain PB2 subunit, have been solved. endonucleases also demonstrated at very N-terminus L proteins mammarena-, orthobunya-, hantaviruses. However, a has not identified an arena- or bunyavirus protein so far. We solved structure 326 C-terminal residues California Academy Sciences (CASV), reptarenavirus, by X-ray crystallography. The...

10.1371/journal.ppat.1006400 article EN cc-by PLoS Pathogens 2017-05-15

The Bunyavirales order is a large and diverse group of segmented negative-strand RNA viruses. Several virus families within this contain important human pathogens, including Sin Nombre (SNV) the Hantaviridae . Despite high epidemic potential bunyaviruses, specific medical countermeasures such as vaccines or antivirals are missing. multifunctional ~250 kDa L protein hantaviruses, amongst other functional domains, harbors RNA-dependent polymerase (RdRp) an endonuclease catalyzes transcription...

10.1371/journal.ppat.1011533 article EN cc-by PLoS Pathogens 2023-08-07

Abstract Severe fever with thrombocytopenia syndrome virus (SFTSV) is a human pathogen that now endemic to several East Asian countries. The viral large (L) protein catalyzes transcription by stealing host mRNA caps via process known as cap-snatching. Here, we establish an in vitro cap-snatching assay and present three high-quality electron cryo-microscopy (cryo-EM) structures of the SFTSV L biologically relevant, transcription-specific states. In priming-state structure, show capped RNA...

10.1093/nar/gkae330 article EN cc-by-nc Nucleic Acids Research 2024-05-06

Lassa virus is a negative-strand RNA with only four structural proteins that causes periodic outbreaks in West Africa. The nucleoprotein (NP) encapsidates the viral genome, forming ribonucleoprotein complexes (RNPs) together and L protein. RNPs must be continuously restructured during genome replication transcription. Z protein important for membrane recruitment of RNPs, particle assembly, budding has also been shown to interact However, interaction NP, RNA, poorly understood. Here, we...

10.1021/jacs.3c07325 article EN cc-by-nc-nd Journal of the American Chemical Society 2023-12-17

Abstract Lassa virus is a negative-strand RNA with only four structural proteins that causes periodic outbreaks in West Africa. The nucleoprotein (NP) encapsidates the viral genome, forming ribonucleoprotein complexes (RNPs) together and L protein. RNPs have to be continuously restructured during genome replication transcription. Z protein important for membrane recruitment of RNPs, particle assembly budding, has also been shown interact However, interaction NP, poorly understood. Here, we...

10.1101/2023.02.09.527830 preprint EN cc-by-nc-nd bioRxiv (Cold Spring Harbor Laboratory) 2023-02-09

ABSTRACT Severe fever with thrombocytopenia syndrome virus (SFTSV) is a human pathogen that now endemic to several East Asian countries. The viral large (L) protein catalyzes transcription by stealing host mRNA caps via process known as cap-snatching. Here, we establish an in vitro cap-snatching assay and present three high-quality electron cryo-microscopy (cryo-EM) structures of the SFTSV L biologically relevant, transcription-specific states. In priming-state structure, show capped RNA...

10.1101/2023.11.29.569195 preprint EN cc-by-nc bioRxiv (Cold Spring Harbor Laboratory) 2023-11-29

Bunyaviruses constitute a large and diverse group of viruses encompassing many emerging pathogens, such as Rift Valley fever virus (family Phenuiviridae), with public veterinary health relevance but very limited medical countermeasures are available. For the development antiviral strategies, identification validation virus-specific targets would be high value. The cap-snatching mechanism is an essential process in life cycle bunyaviruses to produce capped mRNAs, which then recognized...

10.1038/s41598-023-50158-5 article EN cc-by Scientific Reports 2023-12-20

Abstract Lassa virus, which causes annual outbreaks in West Africa with increasing case numbers recent years, is recognized by the WHO R&D blueprint as a significant threat for public health high epidemic potential and no effective countermeasures. The viral large (L) protein, contains RNA-dependent RNA polymerase, key player transcription of mRNA genome replication. Here we present nine cryo-EM structures virus L protein apo-, promoter-bound pre-initiation active synthesis states. We...

10.1101/2021.06.24.449696 preprint EN cc-by-nc bioRxiv (Cold Spring Harbor Laboratory) 2021-06-24

ABSTRACT The Bunyavirales order contains several emerging viruses with high epidemic potential, including Severe fever thrombocytopenia syndrome virus (SFTSV). lack of medical countermeasures, such as vaccines and antivirals, is a limiting factor for the containment any outbreak. To develop antivirals profound understanding viral replication process essential. L protein bunyaviruses multi-functional multi-domain performing both transcription genome and, therefore, would be an ideal drug...

10.1101/2020.03.02.973065 preprint EN cc-by-nc-nd bioRxiv (Cold Spring Harbor Laboratory) 2020-03-03

ABSTRACT Severe fever with thrombocytopenia syndrome virus (SFTSV) is a phenuivirus that has rapidly become endemic in several East Asian countries. The large (L) protein of SFTSV, which includes the RNA-dependent RNA polymerase (RdRp), responsible for catalysing viral genome replication and transcription. Here, we present 5 cryo-electron microscopy (cryo-EM) structures L states process, from pre-initiation to late-stage elongation, at resolution up 2.6 Å. We identify how binds 5′ hook-like...

10.1101/2022.08.25.505333 preprint EN cc-by-nc bioRxiv (Cold Spring Harbor Laboratory) 2022-08-26

10.32786/2071-9485-2018-03-203-209 article EN PROCEEDINGS of Nizhnevolzhskiy agrouniversity complex science and higher vocational education 2018-09-25
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