- Plant Diversity and Evolution
- Plant and Fungal Species Descriptions
- Genomics and Phylogenetic Studies
- Phytochemistry and Biological Activities
- Natural product bioactivities and synthesis
- Plant Pathogens and Fungal Diseases
- Phytochemical Studies and Bioactivities
- Genetic diversity and population structure
- Plant Ecology and Taxonomy Studies
- African Botany and Ecology Studies
- Psidium guajava Extracts and Applications
- Ethnobotanical and Medicinal Plants Studies
- Machine Learning in Bioinformatics
- Medicinal Plants and Bioactive Compounds
- Mycorrhizal Fungi and Plant Interactions
- Phytochemistry and Bioactive Compounds
- Genetics, Bioinformatics, and Biomedical Research
Umm al-Qura University
2015-2024
King Abdulaziz University
2020-2022
Abstract Background The plastome of medicinal and endangered species in Kingdom Saudi Arabia, Barleria prionitis was sequenced. compared with that seven Acanthoideae order to describe the plastome, spot microsatellite, assess dissimilarities within sampled plastomes infer their phylogenetic relationships. Results B. 152,217 bp length Guanine-Cytosine Adenine-Thymine content 38.3 61.7% respectively. It is circular quadripartite structure constitute a large single copy (LSC, 83, 772 bp), small...
This current study presents, for the first time, complete chloroplast genome of two Cleomaceae species:
This study presents for the first time complete chloroplast genomes of four medicinal species in Capparaceae family belonging to two different genera, Cadaba and Maerua (i.e., C. farinosa, glandulosa, M. crassifolia oblongifolia), investigate their evolutionary process infer phylogenetic positions. The are considered important plants, used treatment many diseases. In genus Cadaba, genome ranges from 156,481 bp 156,560 bp, while that 155,685 155,436 bp. oblongifolia contains 138 genes,...
Ehretiaceae is a family in the order Boraginales. It contains more than 150 species. The classification has remained elusive and changed over time from subfamily to family, or vice versa. In this paper, we sequenced, characterized, analyzed complete chloroplast (cp) genomes of Ehretia cymosa obtusifolia, their cp were compared those related length E. was 156,328 bp, whereas that obtusifolia 155,961 bp. Each genome contained 114 genes, including 80 protein-coding 4 rRNA 30 tRNA genes. Repeat...
Cordiaceae is a family comprising more than 400 species in the order Boraginales. The classification of this has undergone changes over time, transitioning between and subfamily status. In present study, complete chloroplast (cp) genomes Cordia monoica sinensis were sequenced, their cp then characterized, analyzed, compared to those closely related taxa. lengths C. 151,813 bp 152,050 bp, respectively. Both consisted 114 genes, divided into 4 ribosomal RNA 30 transfer 80 protein-coding genes....
The relationship between six Abutilon species was examined using different taxonomic investigation tools. carried out morphological and numerical studies. Fresh materials of were collected from localities in Saudi Arabia during 2018 2019. Numerical analysis based on the Principle Coordinates, Component Unweighted Pair Group Method with Arithmetic Algorithm Clustering. results indicated that there significant differences characters especially leaves, fruits flowers features. Morphometric...
Caylusea hexagyna and Ochradenus baccatus are two species in the Resedaceae family. In this study, we analysed complete plastid genomes of these using high-throughput sequencing technology compared their genomic data. The length genome C. was 154,390 bp while that O. 153,380 bp. lengths inverted repeats (IR) regions were 26,526 26,558 bp, those large single copy (LSC) 83,870 83,023 bp; small (SSC) 17,468 17,241 baccatus, respectively. Both consisted 113 genes: 79 protein-coding genes, 30...
The genera Tetraena Maxim. and Zygophyllum L. (Zygophyllaceae) present different morphological characters, viz. growth habit, leaf features, flower traits fruit shape, have a high diversity of species in Africa, Australia Asia. Six [T. alba (L.f.) Beier & Thulin, T. coccinea (L) decumbens (Delile) hamiensis (Schwein f.) propinqua (Decne.) Ghaz. Osborne simplex (L.) Thulin], one (Z. fabago L.) been identified Saudi Arabia, most which grow sandy soils saline habitats as shrubs herbs. One...
In this study, we present the complete chloroplast genome of Dipterygium glaucum an important medicinal plant in Saudi Arabia, order to evaluate evolutionary relationship family Cleomaceae. The cp is second be sequenced Cleomaceae family, it has a circular structure and length 158,576 bp with 35.74% GC content. divided into four regions: LSC 87,738 bp, SSC 18,420 pair inverted repeats 26,209 each. D. encodes 116 different genes, including 81protien coding 31tRNA genes rRNA genes....
Heliotropiaceae is a family of the order Boraginales and has over 450 species. The members have been widely reported to be used in traditional medicine Over time, classification remained uncertain moved from subfamily, or conversely.
The succulent shrubs Desmidorchis penicillata and D. retrospiciens , part of the taxonomically challenging genus are well‐known for their ecological resilience medicinal significance. This study sequences first complete chloroplast genomes these species, shedding light on genomic characteristics evolutionary relationships. circular (161 776 bp) (162 277 display a quadripartite structure typical Angiosperms. Gene content, order, GC content consistent, featuring 114 unique genes, including 80...
During 2013 and 2014, fresh material of Tetraena hamiensis (Schweinf.) Beier & Thulin was collected from four different localities in Saudi Arabia. Some morphological differences, especially leaf, flower parts, fruit characters, were observed among individuals this species within the same location. Principal coordinates analysis unweighted pair group method with arithmetic algorithm clustering test split off T. these varieties as three clusters; one comprises characters overlapping those...
In order to provide a basis for better understanding of phylogenetic relationships Saudi Arabian Tetraena Maxim. and Zygophyllum L., 44 specimens representing seven taxa, were reconstructed based on chloroplast DNA data rbcL trnL-F. The combined (rbcL trnL-F) contributed more phylogenetically informative characters than in individual regions. Phylogenetic analysis the regions both Maximum Parsimony Bayesian criteria showed that species monophyletic. fabag L. was nested one clade with Z....
Background: Comparative study of the complete chloroplast genomes some species in Subtribe Asclepiadeae was conducted to evaluate variations and similarities between resolve phylogenetic relationship within subtribe. P. tomentosa has been used for medicinal uses Saudi Arabia, Middle East, Africa Brazil. It is often cosmetics tanning industries, although it’s very well utilized as a traditional medicine many civilizations.Methods: The were compared using Mvista Bioinformatics tools inverted...
We studied the complete chloroplast genome of Gomphocarpus siniacus and Duvalia velutina from Asclepiadoideae subfamily; due to their medicinal importance distribution worldwide interest became high. In this study we analyzed genomes G. D. using Illumina sequencing technology. The sequences were compared with other species Apocynaceae family. is 162,570 bp while has154, 478 in length. Both consist 119 genes; encode 31 tRNA genes, eight rRNA genes. Comparative studies two showed variations...
The Ficus populifolia Vahl. in the Arabian Peninsula is threatened, peripheral, and geographically isolated from its main population Africa. Here, entire plastome of F. was sequenced analyzed to provide a baseline genetic resource for future research. has classic quadripartite structure with size 160,610 bp, large small single copies 88,729 20,097 respectively, each pair inverted repeats are 25,892 bp. genome includes 113 unique genes, 79 protein-coding 30 tRNAs, 4 rRNAs. results reveal...
Capparis spinosa L. and decidua Forsk. belong to the Capparaceae family. The two species are important medicinal plants uses in treatment of various ailments. In this study, we present complete chloroplast genomes species. plastome have a circular structure length 157,728 bp 157,573 GC content 35.91, 35.96% respectively. genome C. is divided into four regions: LSC 86,732 85,950 respectively, SSC from 18,322 18,621 pair inverted repeats 26,337 26,501 each. Both contained 115 different genes,...