Yanjun Ma

ORCID: 0000-0001-7391-2615
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About
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Research Areas
  • Plant Molecular Biology Research
  • Biofuel production and bioconversion
  • Nanoparticles: synthesis and applications
  • Plant biochemistry and biosynthesis
  • Plant Stress Responses and Tolerance
  • Pharmaceutical and Antibiotic Environmental Impacts
  • Plant Reproductive Biology
  • Plant Gene Expression Analysis
  • Environmental remediation with nanomaterials
  • Bamboo properties and applications
  • Biochemical and biochemical processes
  • Microbial Community Ecology and Physiology
  • Plant Pathogens and Fungal Diseases
  • Microbial Metabolites in Food Biotechnology
  • Lignin and Wood Chemistry
  • Plant responses to water stress
  • Fungal Biology and Applications
  • Enzyme Production and Characterization
  • Microbial Metabolic Engineering and Bioproduction
  • Plant tissue culture and regeneration
  • Antibiotic Resistance in Bacteria
  • Genomics and Phylogenetic Studies
  • Water Treatment and Disinfection
  • Agriculture, Soil, Plant Science
  • Tree Root and Stability Studies

State Grid Corporation of China (China)
2024-2025

Gansu Agricultural University
2011-2025

Northwest Normal University
2022-2025

International Bamboo and Rattan Organization
2022-2023

State Forestry and Grassland Administration
2022-2023

Pingxiang University
2023

University of Wisconsin–Madison
2006-2022

Great Lakes Bioenergy Research Center
2019-2022

Ministry of Education of the People's Republic of China
2022

Peking University Shougang Hospital
2022

Wastewater treatment processes are of growing interest as a potential means to limit the dissemination antibiotic resistance. This study examines response nine representative resistance genes (ARGs) encoding sulfonamide (sulI, sulII), erythromycin (erm(B), erm(F)), and tetracycline (tet(O), tet(W), tet(C), tet(G), tet(X)) various laboratory-scale sludge digestion processes. The class I integron gene (intI1) was also monitored an indicator horizontal transfer multiple Mesophilic anaerobic at...

10.1021/es200827t article EN Environmental Science & Technology 2011-08-04

ORIGINAL RESEARCH article Front. Microbiol., 28 May 2013Sec. Antimicrobials, Resistance and Chemotherapy Volume 4 - 2013 | https://doi.org/10.3389/fmicb.2013.00130

10.3389/fmicb.2013.00130 article EN cc-by Frontiers in Microbiology 2013-01-01

Summary Moso bamboo is a large, woody with the highest ecological, economic and cultural value of all types accounts for up to 70% total area grown. However, spatiotemporal variation role moso shoot during growth period still unclear. We found that can be divided into three distinct periods, including winter growth, early late based on gene expression anatomy. In period, lateral buds germinated from top joint in tip. Intercalary meristems grew vigorously but mitosis intercalary decreased....

10.1111/pbi.12750 article EN cc-by Plant Biotechnology Journal 2017-05-12

Summary Microbial populations provide nitrogen cycling ecosystem services at the nexus of agriculture, environmental quality and climate change. Denitrification, in particular, impacts socio‐environmental systems both positive negative ways, through reduction aquatic atmospheric pollution, but also soil fertility production greenhouse gases. However, denitrification rates are quite variable time space, therefore difficult to model. ecology is working improve predictive denitrifiers by...

10.1111/1462-2920.14555 article EN Environmental Microbiology 2019-02-06

Salinity is a major environmental factor that adversely affects plant growth and production. Cuticular wax protects plants against external stress. The relationship between cuticular biosynthesis salt tolerance remains unclear in Salicornia europaea. This study examined the cuticle thickness, load, morphology, composition, expression of gene identification expression. results showed 600 mM NaCl treatment enhanced thickness total load; crystal structures were also observed after treatment....

10.3390/ijms26062632 article EN International Journal of Molecular Sciences 2025-03-14

This study investigated the response of antibiotic resistance genes (ARGs) to nanosilver (Ag) in lab-scale nitrifying sequencing batch reactors (SBRs), compared Ag+-dosed and undosed controls. Quantitative polymerase chain reaction (q-PCR) targeting sul1, tet(O), ermB class I integron gene intI1 corresponding RNA expression did not indicate measureable effects nanoAg or Ag+ on abundance these genes. However, high-throughput based metagenomic analysis provided a much broader profile responses...

10.1093/femsec/fiw022 article EN FEMS Microbiology Ecology 2016-02-04

Salicornia europaea is a halophyte that has very pronounced salt tolerance. As cell wall manipulating enzyme, xyloglucan endotransglycosylase/hydrolase (XTH) plays an important role in plant resistance to abiotic stress. However, no systematic study of the XTH gene family S. well known. PacBio Iso-Seq transcriptome sequence data were used for bioinformatics and expression analysis using real-time quantitative polymerase chain reaction (RT-qPCR).Transcriptome sequencing (PacBio system)...

10.1186/s12870-021-03269-y article EN cc-by BMC Plant Biology 2021-10-25

This study assesses the oxidative potential, cytotoxicity, and genotoxicity of particulate matter produced from incineration a variety nanomaterials in waste.

10.1039/c4en00182f article EN cc-by-nc Environmental Science Nano 2015-01-01

MADS-box genes are transcription factors which play fundamental roles in flower development and regulation of floral organ identity. However, till date, identification functions remain largely unclear Phyllostachys edulis. In view this, we performed a whole-genome survey identified 34 P. edulis, based on phylogeny, they were classified as MIKCC, MIKC*, Mα Mβ. The detailed analysis about gene structure motifs, phylogenetic classification, comparison divergence duplication provided....

10.3389/fpls.2017.00656 article EN cc-by Frontiers in Plant Science 2017-05-03

Lignin is a plant heteropolymer composed of phenolic subunits. Because its heterogeneity and recalcitrance, the development efficient methods for valorization still remains an open challenge. One approach to utilize lignin chemical deconstruction into mixtures monomeric compounds followed by biological funneling single product. Novosphingobium aromaticivorans DSM12444 has been previously engineered produce 2-pyrone-4,6-dicarboxylic acid (PDC) from depolymerized simultaneously metabolizing...

10.1128/aem.02794-20 article EN cc-by Applied and Environmental Microbiology 2021-02-10

Abstract Background: The microbial symbionts of macrofungal fruiting body have been shown to play momentous roles in host growth, development, and secondary metabolism. Nevertheless, there is no report on the fungal diversity Sanghuangporus , a medicinal edible homologous macrofungus as “forest gold”, which has good effects antioxidation, boosting immunity curing stomachache. Here, functional group fungi associated with most widely applied S. vaninii were characterized by high-throughput...

10.1186/s12866-022-02663-2 article EN cc-by BMC Microbiology 2022-10-19

Fruit development in Lycium ruthenicum Murr. involves a succession of physiological and biochemical changes reflecting the transcriptional modulation thousands genes. Although recent studies have investigated dynamic transcriptomic responses during fruit ripening L. ruthenicum, most been limited scope, thus systematic data representing structural genes transcription factors involved anthocyanin biosynthesis are lacking. In this study, transcriptomes three stages associated with accumulation,...

10.1371/journal.pone.0208627 article EN cc-by PLoS ONE 2018-12-07

Nanoparticles (NPs) are increasingly being incorporated into consumer products and used for industrial applications in ways that will lead to their environmental dissemination <italic>via</italic> wastewater treatment plants (WWTPs).

10.1039/c5ew00114e article EN cc-by-nc Environmental Science Water Research & Technology 2015-01-01

The Dof transcription factor (TF) family belongs to a class of plant-specific TFs and is involved in plant growth, development, response abiotic stresses. However, there are only very limited reports on the characterization moso bamboo (Phyllostachys edulis). In present research, PheDof showed specific expression profiles based RNA-seq data analyses. co-expression network indicated that PheDof12, PheDof14, PheDof16 might play vital roles during flower development. Cis-regulatory element...

10.1139/gen-2017-0189 article EN Genome 2018-01-16

Lignin is the most abundant aromatic polymer on Earth and a resource that could eventually substitute for fossil fuels as source of compounds industrial biotechnological applications. Engineering microorganisms production aromatic-based biochemicals requires detailed knowledge metabolic pathways degradation aromatics are present in lignin. Our isolation analysis Rhodopseudomonas palustris strain capable syringic acid reveal previously unknown route R. . This study highlights several key...

10.1128/aem.01888-19 article EN cc-by Applied and Environmental Microbiology 2019-11-15

An improved understanding of nitrifying microbial communities in wastewater treatment is imperative for proper design and operation biological nutrient removal systems.

10.1039/c9ew00001a article EN Environmental Science Water Research & Technology 2019-01-01

Here we characterize the toxicity of environmentally-relevant forms engineered nanomaterials (ENMs), which can transform during wastewater treatment and persist in aqueous effluents biosolids. In an aerosol exposure scenario, cytotoxicity genotoxicity biosolids from lab-scale sequencing batch reactors (SBRs) to A549 human lung epithelial cells were examined. The SBRs dosed with nanoAg, nano zero-valent iron (NZVI), nanoTiO2 nanoCeO2 at sequentially increasing concentrations 0.1 20 mg/L....

10.1016/j.toxrep.2014.08.017 article EN cc-by Toxicology Reports 2014-01-01

The WRKY gene family, one of the major transcription factor families in plants, plays crucial regulatory roles physiological and biological developmental processes, adaptation plants to environment. However, systematic study structure, expression profiling, functions has not been extensively reported Lycium ruthenicum, although these aspects have comprehensively studied most plant species.In this study, genes were identified from a L. ruthenicum transcriptome database by using...

10.7717/peerj.10207 article EN cc-by PeerJ 2020-10-28

Moso bamboo (Phyllostachys edulis (Carriere) J. Houzeau), native to China, is one of the most economically and ecologically important species. Since economic interests strong clonality, it has been widely cultivated in southern which inevitably reduces natural stands leads gene loss this In study, three populations distributed Anhui, Guangxi, Zhejiang province, were used analyze correlation between phenotypic traits, cell structure, material properties from perspective phenotypic, genetic,...

10.3390/f13010107 article EN Forests 2022-01-12

As a woody plant, peony (Paeonia suffruticosa) has long growth cycle and inefficient traditional breeding techniques. There is an urgent need in molecular to establish efficient stable vitro regeneration genetic transformation system, order overcome the recalcitrant characteristics of shorten cycle. The development plant somatic embryos important way system. Plant-specific WUSCHEL-related homeobox (WOX) family transcription factors play roles development, from embryogenesis lateral organ...

10.3390/horticulturae8030266 article EN cc-by Horticulturae 2022-03-20
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