- Gut microbiota and health
- Urinary Tract Infections Management
- Probiotics and Fermented Foods
- Reproductive tract infections research
- Genomics and Phylogenetic Studies
- Bacteriophages and microbial interactions
- Antibiotic Resistance in Bacteria
- Clostridium difficile and Clostridium perfringens research
- Bioinformatics and Genomic Networks
- Computational Drug Discovery Methods
- Gene expression and cancer classification
- Enterobacteriaceae and Cronobacter Research
Loyola University Chicago
2022-2024
Research Triangle Park Foundation
2007
CEBS (Chemical Effects in Biological Systems) is an integrated public repository for toxicogenomics data, including the study design and timeline, clinical chemistry histopathology findings microarray proteomics data. contains data derived from studies of chemicals genetic alterations, compatible with environmental studies. designed to permit user query using conditions, subject responses then, having identified appropriate set subjects, move module carry out gene signature pathway analysis....
The recognition of the Aerococcus urinae complex (AUC) as an emerging uropathogen has led to growing concerns due a limited understanding its disease spectrum and antibiotic resistance profiles. Here, we investigated prevalence macrolide within urinary AUC isolates, shedding light on potential genetic mechanisms. Phenotypic testing revealed high rate resistance: 45%, among total 189 isolates. Genomic analysis identified integrative conjugative elements (ICEs) carriers gene ermA, suggesting...
species are common inhabitants of the 'healthy' female urinary and vaginal communities, often associated with a lack symptoms in both anatomical sites. Given identification by prior studies similar bacterial it has been hypothesized that two microbiotas fact connected. Here, we carried out whole-genome sequencing 49
Background Antimicrobial and antifungal species are essential members of the healthy human microbiota. Several different lactobacilli that naturally inhabit body have been explored for their probiotic capabilities including strains Lactobacillus gasseri . However, L. (identified by 16S rRNA gene sequencing) has associated with urogenital symptoms. Recently a new sister taxon was described: paragasseri is also posited to qualities. Methods Here, we present genomic investigation all ( n = 79)...
Lactobacillus jensenii is a member of the female urogenital microbiome. Previous research has identified strains L. that are capable inhibiting or killing uropathogens, including E. coli. Here, we present draft genomes three collected from urine samples.
a frequent member of the female urogenital microbiota. Here, we present draft genome assemblies three
ABSTRACT While the urogenital microbiota of asymptomatic females is often dominated by species Lactobacillus , johnsonii not a common member. It more frequently found in gastrointestinal tract. Here, we present draft genome sequence L. UMB3423, which was isolated from voided urine sample.
We present the draft genome for three
Lactobacillus gasseri is a member of the gut, oral, and female urogenital microbiota. Here, we present draft genome assemblies L. UMB1549, UMB1579, UMB1644, UMB3348, UMB5890, which were isolated from voided urine samples females with Type 2 diabetes.
Lactobacillus species are often associated with a healthy environment in the female urogenital tract. Here, we present draft genome assemblies for three L. paragasseri strains isolated from voided urine samples females type II diabetes; two of were collected same individual 3 months apart.
is a frequent member of the healthy female urogenital tract. Here, we present draft genomes two