Vicky Katopodi

ORCID: 0000-0002-4336-7107
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About
Contact & Profiles
Research Areas
  • melanin and skin pigmentation
  • RNA regulation and disease
  • CRISPR and Genetic Engineering
  • Cancer-related molecular mechanisms research
  • RNA and protein synthesis mechanisms
  • RNA modifications and cancer
  • Redox biology and oxidative stress
  • Melanoma and MAPK Pathways
  • RNA Research and Splicing
  • Protein Degradation and Inhibitors
  • Genomics, phytochemicals, and oxidative stress
  • Endoplasmic Reticulum Stress and Disease
  • Herpesvirus Infections and Treatments
  • interferon and immune responses
  • Immunotherapy and Immune Responses

VIB-KU Leuven Center for Cancer Biology
2020-2024

KU Leuven
2021

University of Patras
2021

The ability to adapt environmental stress, including therapeutic insult, contributes tumor evolution and drug resistance. In suboptimal conditions, the integrated stress response (ISR) promotes survival by dampening cytosolic translation. We show that ISR-dependent also relies on a concomitant up-regulation of mitochondrial protein synthesis, vulnerability can be exploited using mitoribosome-targeting antibiotics. Accordingly, such agents sensitized MAPK inhibition, thus preventing...

10.1084/jem.20210571 article EN cc-by-nc-sa The Journal of Experimental Medicine 2021-07-21

Abstract Tumor heterogeneity is a key feature of melanomas that hinders development effective treatments. Aiming to overcome this, we identified LINC00518 (LENOX; lincRNA-enhancer oxidative phosphorylation) as melanoma-specific lncRNA expressed in all known melanoma cell states and essential for survival vitro vivo. Mechanistically, LENOX promoted association the RAP2C GTPase with mitochondrial fission regulator DRP1, increasing DRP1 S637 phosphorylation, fusion, phosphorylation. expression...

10.1158/0008-5472.can-22-0959 article EN cc-by-nc-nd Cancer Research 2022-10-10

Abstract Although immune checkpoint blockade (ICB) has revolutionized cancer treatment, resistance mechanisms limit its clinical benefit. Here we characterise LISRR , a cancer-specific lncRNA highly expressed in melanoma patients refractory to ICB. In cells undergoing (therapeutic) stress, recruits DAZAP1 (Deleted AZoospermia Associated Protein 1) polysomes and drives the assembly of subset ribosomes at endoplasmic reticulum, directing synthesis an immunosuppressive translatome. This...

10.1101/2023.01.06.523012 preprint EN cc-by-nc-nd bioRxiv (Cold Spring Harbor Laboratory) 2023-01-08

Summary Therapy resistance remains a major clinical challenge for the management of metastatic melanoma. Here we show that activation Integrated Stress Response (ISR), which is common in drug-tolerant and resistant melanoma, promotes selective synthesis mitochondrial proteins cytosol. Since translation adapts to influx nuclear-encoded proteins, ISR indirectly enhances makes these cells highly vulnerable inhibitors. Treatment melanoma with mitoribosome-targeting antibiotics, induces...

10.1101/2020.06.26.173492 preprint EN cc-by-nc-nd bioRxiv (Cold Spring Harbor Laboratory) 2020-06-26

KRASG12C is among the most common oncogenic mutations in lung adenocarcinoma and a promising target for treatment by small-molecule inhibitors. KRAS signaling responsible modulation of tumor microenvironment, with translation factors being prominent deregulated targets. In present study, we used TALENs to edit EGFRWT CL1-5 A549 cells integration Tet-inducible expression system. Subsequent analysis both cell lines showed that cap-dependent was impaired via involvement mTORC2 NF-κB. contrast,...

10.3390/ijms22042222 article EN International Journal of Molecular Sciences 2021-02-23

Abstract Upregulation of mitochondrial respiration coupled with high ROS-scavenging capacity is a characteristic shared by drug-tolerant cells in several cancers. As translational fidelity essential for cell fitness, protection the and cytosolic ribosomes from oxidative damage pivotal. While mechanisms recognizing repairing such exist cytoplasm, corresponding process mitochondria remains unclear. By performing Ascorbate PEroXidase (APEX)-proximity ligation assay directed to matrix followed...

10.1101/2024.01.04.574152 preprint EN cc-by-nd bioRxiv (Cold Spring Harbor Laboratory) 2024-01-04

<div>Abstract<p>Tumor heterogeneity is a key feature of melanomas that hinders development effective treatments. Aiming to overcome this, we identified LINC00518 (LENOX; lincRNA-enhancer oxidative phosphorylation) as melanoma-specific lncRNA expressed in all known melanoma cell states and essential for survival <i>in vitro</i> vivo</i>. Mechanistically, LENOX promoted association the RAP2C GTPase with mitochondrial fission regulator DRP1, increasing DRP1 S637...

10.1158/0008-5472.c.6514419.v1 preprint EN 2023-03-31

<div>Abstract<p>Tumor heterogeneity is a key feature of melanomas that hinders development effective treatments. Aiming to overcome this, we identified LINC00518 (LENOX; lincRNA-enhancer oxidative phosphorylation) as melanoma-specific lncRNA expressed in all known melanoma cell states and essential for survival <i>in vitro</i> vivo</i>. Mechanistically, LENOX promoted association the RAP2C GTPase with mitochondrial fission regulator DRP1, increasing DRP1 S637...

10.1158/0008-5472.c.6514419 preprint EN 2023-03-31
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