Jian Song

ORCID: 0000-0002-5830-5435
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About
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Research Areas
  • Echinoderm biology and ecology
  • Soybean genetics and cultivation
  • Marine Bivalve and Aquaculture Studies
  • Sugarcane Cultivation and Processing
  • Biofuel production and bioconversion
  • Aquaculture Nutrition and Growth
  • Coral and Marine Ecosystems Studies
  • Aquatic life and conservation
  • Invertebrate Immune Response Mechanisms
  • Legume Nitrogen Fixing Symbiosis
  • Ocean Acidification Effects and Responses
  • Plant Gene Expression Analysis
  • Plant Genetic and Mutation Studies
  • Genetic Mapping and Diversity in Plants and Animals
  • Marine and coastal plant biology
  • Plant pathogens and resistance mechanisms
  • Marine Biology and Environmental Chemistry
  • Plant Molecular Biology Research
  • Cocoa and Sweet Potato Agronomy
  • Nematode management and characterization studies
  • Aquaculture disease management and microbiota
  • Natural Products and Biological Research
  • Maritime Transport Emissions and Efficiency
  • Marine Ecology and Invasive Species
  • Lipid metabolism and biosynthesis

Dalian Ocean University
2015-2025

Ministry of Agriculture and Rural Affairs
2018-2025

Yangtze University
2015-2024

National Institute of Metrology
2023

University of Birmingham
2023

Nanjing University of Information Science and Technology
2023

Institute of Crop Sciences
2014-2022

Chinese Academy of Agricultural Sciences
2014-2022

University of Florida
2014-2018

Dezhou University
2014-2018

Sequencing and de novo assembly of seven wild relatives soybean yields insights relevant to crop domestication improvement. Wild crops are an important source genetic diversity for agriculture, but their gene repertoire remains largely unexplored. We report the establishment analysis a pan-genome Glycine soja, relative cultivated max, by sequencing phylogenetically geographically representative accessions. Intergenomic comparisons identified lineage-specific genes with copy number variation...

10.1038/nbt.2979 article EN cc-by-nc-sa Nature Biotechnology 2014-09-14

Next-generation sequencing (NGS)-based bulked-segregant analysis (BSA) approaches have been proven successful for rapidly mapping genes in plant species. However, most such methods are based on mutants and usually only one gene controlling the mutant phenotype is identified. In this study, NGS-based BSA was employed to map simultaneously two qualitative cotyledon color of seed soybean. Yellow-cotyledon (YC) green-cotyledon (GC) bulks from progenies a biparental population (Zhonghuang 30 ×...

10.3389/fpls.2017.00919 article EN cc-by Frontiers in Plant Science 2017-05-30

Sugarcane (Saccharum spp.) and other members of Saccharum spp. are attractive biofuel feedstocks. One the two World Collections Related Grasses (WCSRG) is in Miami, FL. This WCSRG has 1002 accessions, presumably with valuable alleles for biomass, important agronomic traits, stress resistance. However, not been fully exploited by breeders due to its lack characterization unmanageable population. In order optimize use this genetic resource, we aim 1) genotypically evaluate all accessions...

10.1371/journal.pone.0110856 article EN cc-by PLoS ONE 2014-10-21

Mutagenized populations have provided important materials for introducing variation and identifying gene function in plants. In this study, an ethyl methanesulfonate (EMS)-induced soybean (Glycine max) population, consisting of 21,600 independent M2 lines, was developed. Over 1,000 M4 (5) families, with diverse abnormal phenotypes seed composition, shape, plant morphology maturity that are stably expressed across different environments generations were identified. Phenotypic analysis the...

10.1111/jipb.12505 article EN cc-by-nc Journal of Integrative Plant Biology 2016-10-24

Sugarcane (Saccharum spp.) is one of the most important economic crops because its high sugar production and biofuel potential. Due to polyploid level complex genome sugarcane, it has been a huge challenge investigate genomic sequence variations, which are critical for identifying alleles contributing agronomic traits. In order mine genetic variations in genotyping by sequencing (GBS), was used genotype 14 representative Saccharum accessions. GBS method generate large number markers, enabled...

10.1186/s12864-017-3980-3 article EN cc-by BMC Genomics 2017-08-09

Sugarcane (Saccharum spp.) is a highly energy-efficient crop primarily for sugar and bio-ethanol production. genetics cultivar improvement have been extremely challenging largely due to its complex genomes with high polyploidy levels. In this study, we deeply sequenced the coding regions of 307 sugarcane germplasm accessions. Nearly five million sequence variations were catalogued. The average 98× depth enabled different allele dosages variation be differentiated in polyploid collection....

10.1111/pbi.12992 article EN cc-by Plant Biotechnology Journal 2018-07-27

Soybean seed coat exists in a range of colors from yellow, green, brown, black, to bicolor. Classical genetic analysis suggested that soybean color was moderately complex trait controlled by multi-loci. However, only couple loci could be detected using single biparental segregating population. In this study, combination association mapping and bulk segregation employed identify genes/loci governing soybean. A total 14 loci, including nine novel five previously reported ones, were identified...

10.1371/journal.pone.0159064 article EN cc-by PLoS ONE 2016-07-12

Sugarcane (Saccharum spp.) is an important sugar and biofuel crop with high polyploid complex genomes. The Saccharum complex, comprised of genus a few related genera, are genetic resources for sugarcane breeding. A large amount natural variation exists within the complex. Though understanding their allelic has been challenging, it critical to dissect structure identify alleles controlling traits in sugarcane. To characterize variations target enrichment sequencing approach was used assay 12...

10.3389/fpls.2016.00804 article EN cc-by Frontiers in Plant Science 2016-06-08

10.1016/j.cbpb.2014.10.004 article EN Comparative Biochemistry and Physiology Part B Biochemistry and Molecular Biology 2014-10-24

This study simulated the effects of direct predatory pressure, indirect and conspecific injury signals on sea cucumber (Apostichopus japonicus) to determine changes in activity immune defense enzymes (lysozyme, acid phosphatase, alkaline phosphatase) antioxidant stress (catalase, superoxide dismutase, malondialdehyde). Samples juveniles were collected at 3 h, 12 72 96 h post stress, six related selected for assays, namely, lysozyme (LZM), phosphatase (ACP), (AKP), dismutase (SOD), catalase...

10.3390/fishes9090337 article EN cc-by Fishes 2024-08-27

Abstract The characterization of reservoir fluid properties is a crucial component oilfield operations, as it provides vital data foundation for the development and optimization work programs. However, complexity water-flooded, along with mixed from drilling cable logging, inherently weak foundational research, make evaluation water-flooded formations difficult. Therefore, this article aims to address challenge by proposing new identification method. In article, an improved Markov variation...

10.1515/geo-2022-0716 article EN cc-by-nc-nd Open Geosciences 2024-01-01
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