A5108050365- Plant nutrient uptake and metabolism
- Genomics and Phylogenetic Studies
- Plant Micronutrient Interactions and Effects
- Legume Nitrogen Fixing Symbiosis
- RNA and protein synthesis mechanisms
- Plant Molecular Biology Research
- Plant Stress Responses and Tolerance
- Advanced Data Storage Technologies
- Genetic Mapping and Diversity in Plants and Animals
- Advanced Wireless Communication Techniques
- Multimedia Communication and Technology
- Water Quality Monitoring Technologies
- Genetics and Plant Breeding
- Environmental Quality and Pollution
- Plant-Microbe Interactions and Immunity
- Thermochemical Biomass Conversion Processes
- Water Quality Monitoring and Analysis
- Microbial Metabolism and Applications
- Microwave Imaging and Scattering Analysis
- Error Correcting Code Techniques
- Peanut Plant Research Studies
- Rice Cultivation and Yield Improvement
- Mycorrhizal Fungi and Plant Interactions
- Combustion and flame dynamics
- GABA and Rice Research
Henan Agricultural University
2019-2023
Civil Aviation University of China
2020
Google (United States)
2018
Tianjin University
2010
We previously developed shinyCircos, an interactive web application for creating Circos diagrams, which has been widely recognized its graphical user interface and ease of use. Here, we introduce shinyCircos-V2.0, upgraded version shinyCircos that includes a new with enhanced usability many features advanced plots. To help users get started provide detailed tutorials example input data sets. The is available online at https://venyao.xyz/shinyCircos/...
Abstract Development of interactive web applications to deposit, visualize and analyze biological datasets is a major subject bioinformatics. R programming language for data science, which also one the most popular languages used in analysis However, building was great challenge users before Shiny package developed by RStudio company 2012. By compiling code into HTML, CSS JavaScript code, has made it incredibly easy build large community bioinformatics even non-programmers. Over 470 have...
Summary Root hair development is crucial for phosphate absorption, but how phosphorus deficiency affects root initiation and elongation remains unclear. We demonstrated the roles of auxin efflux carrier PIN‐FORMED2 (PIN2) phospholipase D (PLD)‐derived phosphatidic acid (PA), a key signaling molecule, in promoting Arabidopsis thaliana under low (LP) condition. LP conditions was greatly suppressed pin2 mutant or treatment with PLDζ2‐specific inhibitor, revealing that PIN2 polar transport...
As a major food crop and model organism, rice has been mostly studied with the largest number of functionally characterized genes among all crops. We previously built funRiceGenes database including ~ 2800 5000 members different gene families. Since being published, accessed by more than 54,400 users over 540,000 pageviews. The continuously updated newly cloned published literature, based on progress functional genomics studies. Up to Nov 2021, 4100 6000 families were collected in...
Nitrate is the primary form of nitrogen uptake in plants, mainly transported by nitrate transporters (NRTs), including NPF (NITRATE TRANSPORTER 1/PEPTIDE FAMILY), NRT2 and NRT3. In this study, we identified a total 78
Abstract Taiwanofungus camphoratus is a highly valued medicinal mushroom that endemic to Taiwan, China. In the present study, mitogenome of T. was assembled and compared with other published Polyporales mitogenomes. The composed circular DNA molecules, total size 114,922 bp. Genome collinearity analysis revealed large-scale gene rearrangements between mitogenomes , contained unique order. number classes introns were variable in 12 species we examined, which proved numerous intron loss or...
Soil inorganic phosphate (Pi) levels are frequently suboptimal for the growth and development of crop plants. Although MADS-box genes participate in diverse plant developmental processes, their involvement starvation responses (PSRs) remains unclear. We identified a type I transcription factor gene, TaMADS2-3D, which was rapidly induced under low-Pi stress roots wheat (Triticum aestivum). A TaMADS2-3D-GFP fusion protein found located nucleus. Transgenic Arabidopsis plants overexpressing...
Identification of structural variations between individuals is very important for the understanding phenotype and diseases. Despite existence dozens programs prediction variations, none them golden standard in this field results multiple were usually integrated to get more reliable predictions. Annotation visualization are their functions. However, no program provides these functions currently as far we concerned. We report an R package, intansv, which can integrate predictions well annotate...
Bread wheat is one of the most important crops worldwide, supplying approximately one-fifth daily protein and calories for human consumption. Gluten aggregation properties play roles in determining processing quality (Triticum aestivum L.) products. Nevertheless, genetic basis gluten has not been reported so far. In this study, a recombinant inbred line (RIL) population derived from cross between Luozhen No. 1 Zhengyumai 9987 was used to identify quantitative trait loci (QTL) underlying with...
Compressed Sensing (CS) is a new signal processing theory under the condition that sparse or compressible. One of central problems in compressed sensing construction matrices. In this paper, we provide deterministic via vector spaces over finite fields, which superior to Devore's using polynomials fields some conditions. Moreover, use algorithm perform numerical simulation experiments on Simulation results also demonstrate recovery performance performs better constructed matrices as compared...
Low-Density Parity-Check (LDPC) codes have low linear decoding complexity, which is a kind of good with excellent performance. Therefore, LDPC great research value. Two kinds are constructed based on vector space over finite field. The code length, rate and minimum distance given. Moreover, the two compared existing codes, better than some ones in terms or distance.
Small RNAs (sRNAs) constitute a large portion of functional elements in eukaryotic genomes. Long inverted repeats (LIRs) can be transcribed into long hairpin (hpRNAs), which further processed small interfering (siRNAs) with vital biological roles. In this study, we systematically identified total 6 619 473 LIRs 424 genomes and developed LIRBase (https://venyao.xyz/lirbase/), specialized database across different aiming to facilitate the annotation identification encoding hpRNAs siRNAs....
Abstract As a major food crop and model organism, rice has been mostly studied with the largest number of functionally characterized genes among all crops. We previously built funRiceGenes database including ∼2800 ∼5000 members different gene families. Since being published, accessed by more than 49,000 users over 490,000 page views. The continuously updated newly cloned published literature, based on progress functional genomics studies. Up to Nov 2021, ≥4100 ∼6000 families were collected...
Water quality model is a useful tool to evaluate the future state of river water through evaluation actual pollution loading or different management options. Based on human brain physiology research, artificial neural network(ANN), which simulates structure and mechanism brain, kind dynamic information processing system that eventually achieves certain functions brain. At present, there are hundreds network approaches, also BP one most frequently used techniques in recent years, whose...