A5016898678- Wheat and Barley Genetics and Pathology
- Plant Disease Resistance and Genetics
- Chromosomal and Genetic Variations
- Genetic Mapping and Diversity in Plants and Animals
- Vibrio bacteria research studies
- Bacterial biofilms and quorum sensing
- Antibiotic Resistance in Bacteria
- Genetics and Plant Breeding
- Biofuel production and bioconversion
- Food composition and properties
- Rice Cultivation and Yield Improvement
- DNA and Nucleic Acid Chemistry
- Bacterial Genetics and Biotechnology
Semmelweis University
2024
United States Department of Agriculture
2003-2006
Western Regional Research Center
2003-2005
Cornell University
2005
Agricultural Research Service
2003-2005
University of California, Davis
2004-2005
Montana State University
2005
Kansas State University
2003
Loci detected by Southern blot hybridization of 3,977 expressed sequence tag unigenes were mapped into 159 chromosome bins delineated breakpoints a series overlapping deletions. These data used to assess synteny levels along homoeologous chromosomes the wheat A, B, and D genomes, in relation both bin position on centromere-telomere axis gradient recombination rates arms. Synteny level decreased with distance region from centromere. It also an increase average arm. There twice as many unique...
Abstract This report describes the rationale, approaches, organization, and resource development leading to a large-scale deletion bin map of hexaploid (2n = 6x 42) wheat genome (Triticum aestivum L.). Accompanying reports in this issue detail results from chromosome bin-mapping expressed sequence tags (ESTs) representing genes onto seven homoeologous groups global analysis entire mapped EST data set. Among resources developed were first extensive public collection (113,220 ESTs). Described...
Abstract The focus of this study was to analyze the content, distribution, and comparative genome relationships 996 chromosome bin-mapped expressed sequence tags (ESTs) accounting for 2266 restriction fragments (loci) on homoeologous group 3 chromosomes hexaploid wheat (Triticum aestivum L.). Of these loci, 634, 884, 748 were mapped 3A, 3B, 3D, respectively. individual bin maps revealed bins with a high density ESTs in distal region low proximal arms, exception 3DS 3DL. These distributions...
Abstract The complex hexaploid wheat genome offers many challenges for genomics research. Expressed sequence tags facilitate the analysis of gene-coding regions and provide a rich source molecular markers mapping comparison with model organisms. objectives this study were to construct high-density EST chromosome bin map homoeologous group 2 chromosomes determine distribution ESTs, consensus investigate synteny, examine patterns duplication, assess colinearity rice ESTs assigned map. A total...
Abstract GrainGenes (http://wheat.pw.usda.gov) is an international database for genetic and genomic information about Triticeae species (wheat [Triticum aestivum], barley [Hordeum vulgare], rye [Secale cereale], their wild relatives) oat (Avena sativa) its relatives. A major strength of the project interaction curators with users in research community, placing as both a data repository hub. The primary intensively curated classes are physical maps, probes used mapping, classical genes,...
Abstract We constructed high-density deletion bin maps of wheat chromosomes 5A, 5B, and 5D, including 2338 loci mapped with 1052 EST probes 217 previously (total 2555 loci). This information was combined to construct a consensus chromosome map group 5 24 bins. A relatively higher number were on 5B (38%) compared 5A (34%) 5D (28%). Differences in the levels polymorphism among three partially responsible for these differences. duplicated found (42%). Three times more long arms than short arms,...
The US Wheat Genome Project, funded by the National Science Foundation, developed first large public Triticeae expressed sequence tag (EST) resource. Altogether, 116 272 ESTs were produced, comprising 100 674 5′ and 15 598 3′ ESTs. These derived from 42 cDNA libraries, which created hexaploid bread wheat (Triticum aestivum L.) its close relatives, including diploid (T. monococcum L. Aegilops speltoides L.), tetraploid turgidum rye (Secale cereale using tissues collected various stages of...
Multidrug-resistant Acinetobacter baumannii is a major concern in healthcare institutions worldwide. Several reports described the dissemination of A. high-risk clones that are responsible for high number difficult-to-treat infections. In our study, 19 multidrug-resistant strains from Budapest, Hungary, were investigated based on whole-genome sequencing (WGS). The obtained results analysed together with data 433 Pathogenwatch database. WGS analysis detected 12 belonged to ST2 and seven...