Branko Latinkic

ORCID: 0000-0003-4952-123X
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About
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Research Areas
  • Cancer-related gene regulation
  • RNA modifications and cancer
  • Congenital heart defects research
  • Developmental Biology and Gene Regulation
  • Connective Tissue Growth Factor Research
  • RNA Research and Splicing
  • Genetics and Neurodevelopmental Disorders
  • Wnt/β-catenin signaling in development and cancer
  • Pluripotent Stem Cells Research
  • Animal Genetics and Reproduction
  • Connective tissue disorders research
  • RNA and protein synthesis mechanisms
  • Ubiquitin and proteasome pathways
  • TGF-β signaling in diseases
  • Nuclear Receptors and Signaling
  • Zebrafish Biomedical Research Applications
  • Pancreatic function and diabetes
  • Cardiac electrophysiology and arrhythmias
  • Retinoids in leukemia and cellular processes
  • Epigenetics and DNA Methylation
  • FOXO transcription factor regulation
  • Macrophage Migration Inhibitory Factor
  • Cardiomyopathy and Myosin Studies
  • Muscle Physiology and Disorders
  • Neuroinflammation and Neurodegeneration Mechanisms

Cardiff University
2006-2019

Moredun Research Institute
2010

University College London
2010

Cancer Research UK
2010

Institute of Cancer Research
2010

The Francis Crick Institute
2002-2004

University of Illinois Chicago
1991-2001

Medical Research Council
2001

Illinois College
1991-1997

University of Illinois Urbana-Champaign
1991-1997

Connective-tissue growth factor (CTGF) is a member of the CCN family secreted proteins. members contain four characteristic domains and exhibit multiple activities: they associate with extracellular matrix,they can mediate cell adhesion, migration chemotaxis, modulate activities peptide factors. Many effects CTGF are thought to be mediated by binding integrins, whereas others may because its recently identified ability interact BMP4 TGFβ. We demonstrate, using Xenopus embryos, that also...

10.1242/dev.01045 article EN Development 2004-04-22

Abstract The Wnt signaling pathway is frequently deregulated in cancer due to mutations genes encoding APC, β-catenin, and axin. To identify small-molecule inhibitors of as potential therapeutics, a diverse chemical library was screened using transcription factor reporter cell line which the activity induced at level Disheveled protein. A series deconvolution studies used focus on three compound that selectively killed lines with constitutive signaling. Activities compounds included ability...

10.1158/0008-5472.can-10-1028 article EN Cancer Research 2010-07-08

ABSTRACT Tissue specification in the early embryo requires integration of spatial information at promoters developmentally important genes. Although several response elements for signalling pathways have been identified Xenopus promoters, it is not yet understood what defines sharp borders that restrict expression to a specific tissue. Here we use transgenic frog embryos study and temporal regulation Xbra promoter. Deletion analysis point mutations putative transcription factor-binding sites...

10.1242/dev.127.12.2729 article EN Development 2000-06-15

cyr6l is an immediate early gene that transcriptionally activated in 3T3 fibroblasts by serum, platelet-derived growth factor, fibroblast and the tumor promoter TPA with kinetics similar to induction of c-fos.cyr6l encodes a secreted protein associated cell surface extracellular matrix, may play role cell-cell communication.We report here complete nucleotide sequence mouse gene, which contains four short introns.The transcription start site was mapped Si nuclease primer extension analyses.A...

10.1093/nar/19.12.3261 article EN Nucleic Acids Research 1991-01-01

Cyr61 is a secreted, heparin-binding, extracellular matrix-associated protein whose activities include the promotion of adhesion and chemotaxis, stimulation fibroblast endothelial cell growth. Many, if not all, these are mediated through interactions with integrins. We explore role in early development Xenopus laevis. Gain- loss-of-function experiments show that Xcyr61 required for normal gastrulation movements. This part adhesive properties its related ability to modulate assembly matrix....

10.1242/dev.00449 article EN Development 2003-04-17

Abstract Background GATA factors 4/5/6 have been implicated in the development of heart and endodermal derivatives vertebrates. Work zebrafish has indicated that GATA5 is required for normal earlier than GATA4/6. However, knockout mouse no apparent embryonic phenotype, thereby questioning importance gene vertebrate development. Results In this study we show Xenopus embryos essential early liver precursors. addition, found GATA4 important primordia following their specification, role it might...

10.1186/1471-213x-8-74 article EN cc-by BMC Developmental Biology 2008-07-28

The earliest step in heart formation vertebrates occurs during gastrulation, when cardiac tissue is specified. Dorsoanterior endoderm thought to provide a signal that induces adjacent mesodermal cells adopt fate. However, the nature of this signalling and precise role are unknown because close proximity interdependence mesoderm gastrulation. To better define molecular events underlie induction, we have sought develop simple means inducing tissue. We show transcription factor GATA4, which has...

10.1242/dev.00599 article EN Development 2003-06-30

The cysteine-rich angiogenic protein 61 (Cyr61) is an extracellular matrix-associated, heparin-binding that mediates cell adhesion, stimulates migration, and enhances growth factor-induced proliferation. Cyr61 also promotes chondrogenic differentiation induces neovascularization. In this study, we show a 2-kb fragment of the promoter, which confers factor-inducible expression in cultured fibroblasts, able to drive accurate reporter gene lacZ transgenic mice. Thus, transgene was observed...

10.1210/endo.142.6.8208 article EN Endocrinology 2001-06-01

The mechanisms by which transcription factors, are not themselves tissue restricted, establish cardiomyocyte-specific patterns of in vivo unknown. Nor do we understand how positional cues integrated to provide regionally distinct domains gene expression within the developing heart. We describe regulation Xenopus XMLC2 gene,which encodes a regulatory myosin light chain contractile apparatus cardiac muscle. This is expressed from onset differentiation frog embryo and throughout all myocardium,...

10.1242/dev.00953 article EN Development 2004-01-13

Significance Cyclin D2 is a cell cycle regulator with spatially restricted expression. Loss and gain of function in animal models also revealed role differentiation, but the mechanisms underlying this are incompletely understood. The cardiogenic transcription factor GATA4 an upstream cyclin D2. We show that cyclinD2 part forward reinforcing loop which feeds back to enhance activity through direct interaction. Mutations abrogate interactions associated human congenital heart disease. results...

10.1073/pnas.1312993111 article EN Proceedings of the National Academy of Sciences 2014-01-13

The initial genomic response to serum growth factors is the transcriptional activation of a set immediate-early genes. Serum-induced several these genes involves formation ternary complex that includes factor (SRF), 62 kDa (TCF) and element (SRE). TCF alone does not bind SRE protooncogene c-fos, but requires prior assembly SRF-SRE binary for it be recruited into complex. Here we show this an obligatory prerequisite responsive We demonstrate Elk-1, which has properties TCF, can recruit SRF on...

10.1093/nar/24.7.1345 article EN Nucleic Acids Research 1996-04-01

Transcription factor GATA4 is a critical regulator of the embryonic and postnatal heart, but mechanisms cofactors required for its diverse functions are not fully understood. Here, we show that whereas N-terminal domain inducing cardiogenesis promoting cardiomyocyte survival, distinct residues domains therein necessary to mediate these effects. Cardiogenic activity requires 24-amino-acid (aa) region (aa 129 152) which needed transcriptional synergy physical interaction with BAF60c. The same...

10.1128/mcb.00218-12 article EN Molecular and Cellular Biology 2012-04-03

Background Cardiac induction, the first step in heart development vertebrate embryos, is thought to be initiated by anterior endoderm during gastrulation, but what signals are and how they act unknown. Several signaling pathways, including FGF, Nodal, BMP Wnt have been implicated cardiac specification, both gain- loss-of-function experiments. However, as these pathways regulate germ layer formation patterning, their specific roles induction difficult define. Methodology/Principal Findings To...

10.1371/journal.pone.0007650 article EN cc-by PLoS ONE 2009-10-27

pip92 is an immediate early gene that transcriptionally activated in mouse 3T3 fibroblasts upon treatment with serum growth factors or the tumor promoter 12-O-tetradecanoylphorbol-13-acetate. Here we show a 73-base pair fragment located between base pairs 1231 and 1158 upstream of transcription start site sufficient to mediate transcriptional activation. This contains two binding sites for Ets family low affinity response factor. The minimal sequence mediates induction includes at least one...

10.1016/s0021-9258(17)31634-4 article EN cc-by Journal of Biological Chemistry 1994-09-01

Wnt/β-catenin signaling is often portrayed as a simple pathway that initiated by Wnt ligand at the cell surface leading, via linear series of interactions between 'core pathway' members, to induction nuclear transcription from genes flanked β-catenin/TCF factor binding sites. also regulated much larger set 'non-core regulators'. However relationship regulators' currently not well understood. Aberrant activation has been shown drive tumorgenesis in number different tissues. Mammalian cells...

10.1186/s12943-015-0475-1 article EN cc-by Molecular Cancer 2015-12-01

GATA4-6 transcription factors regulate numerous aspects of development and homeostasis in multiple tissues mesodermal endodermal origin. In the heart, best studied these factors, GATA4, has distinct roles cardiac specification, differentiation, morphogenesis, hypertrophy survival. To improve understanding how GATA4 achieves its here we have focused on carboxy-terminal domain residues required for interaction with cofactors FOG2 Tbx5. We present evidence that carboxy terminal region composed...

10.1016/j.mod.2014.09.001 article EN cc-by Mechanisms of Development 2014-09-22

NKCC1 is a broadly expressed Na + –K –Cl − co‐transporter involved in regulation of ion flux across the cell membrane and regulating volume. Whilst much known about activity its by protein kinases phosphatases, little activities that are independent. In this report we show over‐expression embryos Xenopus laevis induces secondary axes , independently activity. addition, results formation neural tissue ectodermal explants. We also but non‐uniformly tropicalis with prominent expression...

10.1113/jphysiol.2008.161562 article EN The Journal of Physiology 2008-12-02

The mechanisms that govern specification of various cell types constitute vertebrate heart are not fully understood. Whilst most studies development have utilised the mouse embryo, we used an alternative model, embryos frog Xenopus laevis, which permits direct experimental manipulation a non-essential heart. We show in this model pluripotent animal cap explants injected with cardiogenic factor GATA4 mRNA express pan-myocardial as well ventricular and proepicardial markers. found cardiac fate...

10.1016/j.mod.2016.01.001 article EN cc-by Mechanisms of Development 2016-01-08

The cysteine-rich angiogenic protein 61 (Cyr61) is an extracellular matrix-associated, heparin-binding that mediates cell adhesion, stimulates migration, and enhances growth factor-induced proliferation. Cyr61 also promotes chondrogenic differentiation induces neovascularization. In this study, we show a 2-kb fragment of the promoter, which confers factor-inducible expression in cultured fibroblasts, able to drive accurate reporter gene lacZ transgenic mice. Thus, transgene was observed...

10.1210/en.142.6.2549 article EN Endocrinology 2001-06-01

Onecut genes belong to a family of transcription factors that are known be important in embryonic development. In the present study, we analyzed pattern expression Onecut-1/HNF6 Xenopus tropicalis using RT-PCR and whole mount situ hybridization. Expression gene was found conserved neural tube, sensory placodes anterior ventral endoderm domain consistent with developing liver primordium.

10.1387/ijdb.072472ke article EN The International Journal of Developmental Biology 2009-01-01
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