Maksym Shmatkov

ORCID: 0009-0005-5722-9265
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About
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Research Areas
  • Microbial Natural Products and Biosynthesis
  • Genomics and Phylogenetic Studies
  • RNA and protein synthesis mechanisms
  • Computational Drug Discovery Methods
  • Mycobacterium research and diagnosis
  • Biochemical and Molecular Research
  • Antibiotic Resistance in Bacteria

University of Zagreb
2024

Taras Shevchenko National University of Kyiv
2022-2024

University of Ljubljana
2023

ABSTRACT Most biosynthetic gene clusters (BGC) encoding the synthesis of important microbial secondary metabolites, such as antibiotics, are either silent or poorly expressed; therefore, to ensure a strong pipeline novel there is need develop rapid and efficient strain development approaches. This study uses comparative genome analysis instruct rational improvement, using Streptomyces rimosus , producer antibiotic oxytetracycline (OTC) model system. Sequencing genomes two industrial strains...

10.1128/msystems.00250-24 article EN cc-by mSystems 2024-04-02

Abstract Most of the biosynthetic gene clusters (BGC) encoding biosynthesis important microbial secondary metabolites, such as antibiotics, are either silent or poorly expressed; therefore, robust technologies required to secure production natural products for both drug discovery and any subsequent commercial fermentation processes. Industrial strain improvement has resulted almost exclusively from expensive time-consuming approaches improvement. Therefore, ensure a strong pipeline truly...

10.21203/rs.3.rs-3440953/v1 preprint EN cc-by Research Square (Research Square) 2023-10-16

Aim.To identify the potential novel membrane drug targets of Acinetobacter baumannii ATCC 19606.Methods.Clustering paralogues was performed by USEARCH software, identification essential non-homologous proteins to human proteome done with BLASTp and Database genes, determination from unique metabolic pathways carried out using KAAS server at KEGG.The target novelty estimated DrugBank.The sub-cellular localization predicted PSORTb v. 3.0.3,CELLO 2.5 BUSCA.Tertiary structures were built...

10.7124/bc.000a7a article EN Biopolymers and Cell 2022-12-01
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