Jiajun Liu

ORCID: 0009-0007-0699-5917
Publications
Citations
Views
---
Saved
---
About
Contact & Profiles
Research Areas
  • Wheat and Barley Genetics and Pathology
  • Crop Yield and Soil Fertility
  • Genetic Mapping and Diversity in Plants and Animals
  • Genetics and Plant Breeding
  • Plant Molecular Biology Research
  • Plant nutrient uptake and metabolism
  • Plant Reproductive Biology
  • Agriculture, Soil, Plant Science
  • Plant Pathogens and Fungal Diseases
  • Plant pathogens and resistance mechanisms
  • Soil Carbon and Nitrogen Dynamics
  • Bioenergy crop production and management
  • Genomics and Chromatin Dynamics
  • Mycotoxins in Agriculture and Food
  • Chromosomal and Genetic Variations
  • Microbial Community Ecology and Physiology
  • Sunflower and Safflower Cultivation
  • Plant responses to elevated CO2
  • Machine Learning in Bioinformatics
  • Polysaccharides and Plant Cell Walls
  • Clay minerals and soil interactions
  • Fractional Differential Equations Solutions
  • Plant and Fungal Interactions Research
  • Yeasts and Rust Fungi Studies
  • Plant Gene Expression Analysis

Yangzhou University
2018-2025

Shanghai Institute of Nutrition and Health
2025

University of Chinese Academy of Sciences
2025

Shanghai University
2025

Nanjing Agricultural University
2020-2023

Sichuan Agricultural University
2019-2023

Shandong Agricultural University
2022-2023

Rice Research Institute
2023

Jiangxi Academy of Agricultural Sciences
2023

Hubei University of Medicine
2022

The remobilization of nonstructural carbohydrates (NSCs) reserved in rice (Oryza sativa) sheaths is essential for grain filling. This assimilate distribution between plant tissues and organs determined by sucrose non-fermenting-1-related protein kinase 1 (SnRK1). However, the SnRK1-mediated mechanism regulating sheath-to-panicle transport NSCs remains unknown. In this study, leaf cutting treatment was used to accelerate NSC sheaths. Accelerated accompanied increased levels OsSnRK1a mRNA...

10.1093/plphys/kiac124 article EN PLANT PHYSIOLOGY 2022-03-15

Abstract Stripe (yellow) rust, caused by Puccinia striiformis f. sp. tritici ( Pst ), can significantly affect wheat production. Cloning resistance genes is critical for efficient and effective breeding of stripe rust resistant cultivars. One gene Yr10 CG ) underlying the locus has been cloned. However, following haplotype linkage analyses indicate presence additional gene(s) underlying/near locus. Here, we report cloning YrNAM in this region using method sequencing trait-associated...

10.1038/s41467-023-39993-2 article EN cc-by Nature Communications 2023-07-19

Kernel length (KL), kernel width (KW) and thousand-kernel weight (TKW) are key agronomic traits in wheat breeding. Chuannong16 ('CN16') is a commercial cultivar with significantly longer kernels than the line '20828'. To identify characterize potential alleles from CN16 controlling KL, previously developed recombinant inbred (RIL) population derived cross '20828' × 'CN16' genetic map constructed by Wheat55K SNP array SSR markers were used to perform quantitative trait locus/loci (QTL)...

10.1186/s12863-019-0782-4 article EN cc-by BMC Genomic Data 2019-10-16

ABSTRACT In this paper, we firstly construct the truncated Euler–Maruyama (EM) method for Caputo fractional stochastic differential equations (Caputo FSDEs) with local Lipschitz condition and Khasminskii‐type on drift diffusion functions. After that, boundedness strong convergence of numerical solutions are theoretically analyzed. Moreover, order presented EM is proved as , where denotes derivative . end, experiments demonstrated to confirm correctness theoretical results.

10.1002/mma.10801 article EN Mathematical Methods in the Applied Sciences 2025-02-14

Gene expression is the basis for cells to achieve various functions, while DNA methylation constitutes a critical epigenetic mechanism governing gene regulation. Here we propose DeepMethyGene, an adaptive recursive convolutional neural network model based on ResNet that predicts using information. Our transforms Beta values M Gaussian distributed data optimization, dynamically adjusts output channels according input dimension, and implements residual blocks mitigate problem of gradient...

10.1186/s12859-025-06115-2 article EN cc-by-nc-nd BMC Bioinformatics 2025-04-08

Fusarium avenaceum is a generalist pathogen responsible for diseases in numerous crop species. The fungus produces series of mycotoxins including the cyclohexadepsipeptide enniatins. Mycotoxins can be pathogenicity and virulence factors various plant-pathogen interactions, enniatins have been shown to influence aggressiveness on potato tubers. To determine role these other F. avenaceum-host enniatin synthase 1 (ESYN1) disruption overexpression mutants were generated their ability infect...

10.3390/pathogens9020075 article EN cc-by Pathogens 2020-01-21

Kernel size (KS) and kernel weight play a key role in wheat yield. Phenotypic data from six environments Wheat55K single-nucleotide polymorphism array–based constructed genetic linkage map recombinant inbred line population derived the cross between 20828 SY95-71 were used to identify quantitative trait locus (QTL) for length (KL), width (KW), thickness (KT), thousand-kernel (TKW), length–width ratio (LWR), KS, factor form density (FFD). The results showed that 65 QTLs associated with traits...

10.3389/fpls.2021.667493 article EN cc-by Frontiers in Plant Science 2021-06-07

SUMMARY The CUP‐SHAPED COTYLEDON ( CUC ) genes CUC1 , CUC2 and CUC3 regulate organ boundary formation in Arabidopsis. However, the functions of their homologous rice Oryza sativa are still unknown. Here, we have identified an orthologous gene rice, named OsNAM . Subcellular localization yeast two‐hybrid assay results suggested that encodes a conserved nuclear NAC (NAM/ATAF1/CUC2) protein with transcriptional activator. null mutant osnam‐1 presented fused leaf structure, small panicles,...

10.1111/tpj.15143 article EN The Plant Journal 2020-12-25

The essential role of auxin in plant growth and development is well known. Pathways related to synthesis, transport signaling have been extensively studied recent years, the PIN-FORMED (PIN) protein family has identified as being pivotal for polar distribution. However, research focused on functional characterization PIN proteins rice still lacking. In this study, we investigated expression function OsPIN1c OsPIN1d japonica variety (Nipponbare) using gene knockout high-throughput RNA...

10.1093/pcp/pcab172 article EN Plant and Cell Physiology 2021-12-09

The effects of biochar application on dry direct-seeded rice paddies remains unclear. Therefore, we applied to paddy fields over 3 consecutive years assess its soil physicochemical properties and bacterial diversity (conventional fertilization [CK]; + conventional [BC]). BC increased the content 0.25–5 mm water-stable aggregate particles, but decreased that <0.25 aggregates. At different depths, significantly reduced sand silt content. Compared CK, available phosphorus potassium 0–10...

10.3390/agronomy13010004 article EN cc-by Agronomy 2022-12-20

Abstract Spike density (SD), an important spike morphological trait associated with wheat yield, is the spikelet number per (SNS) divided by length (SL). In this study, phenotypic data from eight environments were collected and a recombinant inbred line population (RIL) constructed 20828 cultivar 'Chuannong16' Wheat55K SNP array‐based genetic linkage map used to identify SD quantitative locus (QTL). Correlation between other agronomic traits was calculated. Genes plant growth development for...

10.1111/pbr.12782 article EN Plant Breeding 2019-11-20

Direct seeding of rice has emerged as a strategy for sustainable (Oryza sativa L.) production because advantages, such fewer links, labor and farmland water-saving, easy mechanization, high economic benefits. However, few studies have investigated the effects different organic fertilizers on soil fungal community yield in dry direct-seeded paddy fields. In order to select best combination fertilizer chemical fertilizer, field experiments were used evaluate role no (F0); CF, conventional NPK...

10.3390/agronomy12051213 article EN cc-by Agronomy 2022-05-18

Fusarium head blight (FHB) is a destructive disease of wheat that reduces yield and grain quality. High-throughput proteomic techniques have been used to identify wide range candidate proteins involved in host resistance. The majority the published works on proteomics response graminearum infection are case specific. In current study, high-throughput quantitative label-free strategy was employed bulked rachides F. graminearum-infected collected from multiple genotypes. Differentially...

10.1094/phyto-03-18-0086-r article EN other-oa Phytopathology 2018-07-24

Tiller angle (TA) strongly influences plant architecture and grain yield in cereals. However, the genetic basis of TA wheat is largely unknown. We identified three TA-related quantitative trait loci (QTL). One them was QTa.sau-2B-769, a major QTL localized on chromosome arm 2BL. QTa.sau-2B-769 detected seven environments, explaining 18.1%–51.1% phenotypic variance. developed linked Kompetitive Allele-Specific Polymerase chain reaction (KASP) marker, KASP-AX-108792274, to further validate...

10.1016/j.cj.2021.02.013 article EN cc-by-nc-nd The Crop Journal 2021-04-06

Trichomes are differentiated epidermal cells and exist on above-ground organs of nearly all land plants with important roles in resistance to a wide range biotic abiotic stresses. We attempted obtain candidate gene (s) for Hairy glume ( Hg ), responsible the trichome wheat glume, by using bulked segregant exome capture sequencing (BSE-Seq), while was only mapped 0.52–3.26 Mb 1AS. To further fine map this identify genes region, near isogenic line-derived population consisting 2,050 F 2 lines...

10.3389/fpls.2022.1006510 article EN cc-by Frontiers in Plant Science 2022-09-20
Coming Soon ...