A5044883702- Genetic Mapping and Diversity in Plants and Animals
- Cocoa and Sweet Potato Agronomy
- Crop Yield and Soil Fertility
- Plant Stress Responses and Tolerance
- Plant biochemistry and biosynthesis
- Plant Gene Expression Analysis
- Genetics and Plant Breeding
- Wheat and Barley Genetics and Pathology
- Plant Molecular Biology Research
- Advanced Photocatalysis Techniques
- Plant nutrient uptake and metabolism
- Genetic diversity and population structure
- Fermentation and Sensory Analysis
- Photosynthetic Processes and Mechanisms
- Plant pathogens and resistance mechanisms
- Horticultural and Viticultural Research
- Genomics and Phylogenetic Studies
- CRISPR and Genetic Engineering
- Analytical Chemistry and Sensors
- Identification and Quantification in Food
- Plant tissue culture and regeneration
- Gas Sensing Nanomaterials and Sensors
- Protist diversity and phylogeny
- Microbial Community Ecology and Physiology
- Chromosomal and Genetic Variations
Tianjin Academy of Agricultural Sciences
2022-2024
Institute of Crop Sciences
2020-2024
Chinese Academy of Agricultural Sciences
2020-2024
Shandong University of Technology
2023-2024
Tianjin Economic-Technological Development Area
2022
Cauliflower (Brassica oleracea L. var. botrytis) is a distinctive vegetable that supplies nutrient-rich edible inflorescence meristem for the human diet. However, genomic bases of its selective breeding have not been studied extensively. Herein, we present high-quality reference genome assembly C-8 (V2) and comprehensive variation map consisting 971 diverse accessions cauliflower relatives. Genomic selection analysis deep-mined divergences were used to explore stepwise domestication process...
Genetically enhancing drought tolerance and nutrient use efficacy enables sustainable stable wheat production in drought-prone areas exposed to water shortages low soil fertility, due global warming declining natural resources. In this study, plants, exhibiting improved N-use efficacy, were developed by introducing GmTDN1, a gene encoding DREB-like transcription factor, into two modern winter varieties, cv Shi4185 Jimai22. Overexpressing GmTDN1 resulted significantly low-N under N-deficient...
Abstract Eucalyptus is a widely planted hardwood tree species due to its fast growth, superior wood properties and adaptability. However, the post‐transcriptional regulatory mechanisms controlling tissue development stress responses in remain poorly understood. In this study, we performed comprehensive analysis of gene expression profile alternative splicing (AS) landscape E. grandis using strand‐specific RNA‐Seq, which encompassed 201 libraries including different organs, developmental...
Abstract Cauliflower is one of the most important vegetable crops grown worldwide. However, lack genetic diversity information and efficient molecular markers hinders efforts to improve cauliflower. This study aims construct DNA fingerprints for 329 cauliflower cultivars based on SNP KASP system. After rigorous filtering, a total 1662 candidate SNPs were obtained from nearly 17.9 million loci. The mean values PIC, MAF, heterozygosity gene these 0.389, 0.419, 0.075, 0.506, respectively. We...
Background Bud sport mutation occurs frequently in fruit plants and acts as an important approach for grapevine improvement breeding. ‘Jinzao Wuhe’ is a bud of the elite cultivar ‘Himord Seedless’ with obviously enlarged organs berries. To date, molecular mechanisms underlying berry enlargement caused by grapevines remain unclear. Methods Whole genome resequencing (WGRS) was performed two pairs sports their maternal similar phenotype to identify SNPs, InDels structural variations (SVs) well...
Foxtail millet (Setaria italica) is an important C4 model crop; however, due to its high-density planting and high stature, lodging at the filling stage resulted in a serious reduction yield quality. Therefore, it imperative identify deploy genes controlling foxtail plant height. In this study, we used semi-dwarf line 263A elite high-stalk breeding variety, Chuang 29 construct F2 population dwarf genes. We performed transcriptome analysis (RNA-seq) using internode tissues sampled three...
Nucleocytoplasmic transport receptors play key roles in the nuclear translocation of disease resistance proteins, but associated mechanisms remain unclear. The Arabidopsis thaliana gene SAD2 encodes an importin β-like protein. A transgenic line overexpressing (OESAD2/Col-0) showed obvious to Pseudomonas syringae pv. tomato DC3000 (Pst DC3000) compared wild type (Col-0), knockout mutant sad2-5 was susceptible. Transcriptomic analysis then performed on Col-0, OESAD2/Col-0, and leaves at 0, 1,...
Bacillus pumilus plays an important role in industrial application and biocontrol activities, as well causing humans plants disease, leading to economic losses biosafety concerns. However, until now, the pathogenesis underlying mechanisms of B. strains remain unclear. In our previous study, one representative isolate named HM-7 has been recovered proved be causal agent fruit rot on muskmelon (Cucumis melo). Herein, we present a complete annotated genome sequence that contains 4,111 coding...
Molecular markers play a crucial role in marker-assisted breeding and varietal identification. However, the application of insertion/deletion (InDels) grapevines has been limited by low throughput separability gel electrophoresis. To developed effective InDel for grapevines, this study reports novel, high-throughput pipeline marker development After rigorous filtering, 11 polymorphic multi-allelic were selected. These then used to perform genetic identification 123 elite grape cultivars...
The leaf morphology is an important agronomic trait in crop production. Our study identified a maple type (
Drought tolerance is one of the most important targets for wheat breeding. Previous population genetics studies have uncovered 20 large-effect quantitative trait loci (QTLs) that contribute to stress-responsive agronomic traits. Here, we identified 19,035,814 single nucleotide polymorphisms and 719,049 insertion/deletion variations in genomes two popular winter cultivars, Lu-Mai 14 Han-Xuan 10, using a whole-genome re-sequencing assay. There were 4972 loss-of-function mutations carried by...
The diploid wild goat grass Aegilops tauschii (Ae. tauschii, 2n = 14; DD), as the D-sub genome of common wheat, provides rich germplasm resources for many aspects wheat breeding. Abscisic acid (ABA) is an essential phytohormone that plays a pivotal role in plant adaptation to abiotic stresses. However, gene regulation network Ae. response ABA stress remains unclear. Here, we conducted time-course strand-specific RNA-sequencing study globally profile transcriptome responded treatment...
Abstract Cauliflower is one of the most important vegetable crops grown worldwide. However, efforts to improve cauliflower are hindered by lack genetic diversity information and efficient molecular markers. In this study, we aim construct DNA fingerprints for 329 cultivars based on SNP markers KASP system. After rigorous filtering, a total 1,662 candidate SNPs were obtained from nearly 17.9 million loci. The mean values PIC, MAF, heterozygosity gene these 0.389, 0.419, 0.075, 0.506,...