Mariia Yu. Rybak

ORCID: 0000-0002-0478-0222
Publications
Citations
Views
---
Saved
---
About
Contact & Profiles
Research Areas
  • RNA and protein synthesis mechanisms
  • Amino Acid Enzymes and Metabolism
  • Enzyme Structure and Function
  • RNA modifications and cancer
  • Tuberculosis Research and Epidemiology
  • Genomics and Phylogenetic Studies
  • Bacterial Genetics and Biotechnology
  • Antimicrobial Peptides and Activities
  • Antimicrobial Resistance in Staphylococcus
  • Biochemical effects in animals
  • Bacteriophages and microbial interactions
  • Neuropeptides and Animal Physiology
  • Viral Infections and Immunology Research
  • Enzyme Catalysis and Immobilization
  • Chemical Synthesis and Analysis
  • Legal and Regulatory Analysis
  • Cancer therapeutics and mechanisms
  • Biochemical Acid Research Studies
  • Flavonoids in Medical Research
  • Gut microbiota and health
  • Peptidase Inhibition and Analysis
  • Protein Hydrolysis and Bioactive Peptides
  • Glycosylation and Glycoproteins Research
  • Hemoglobin structure and function
  • Pneumocystis jirovecii pneumonia detection and treatment

The University of Texas Medical Branch at Galveston
2024

Institute of Molecular Biology and Genetics
2015-2021

National Academy of Sciences of Ukraine
2021

Instituto de Biomedicina y Genética Molecular de Valladolid
2019

Institute of Software Systems
2019

Abstract To conserve energy during starvation and stress, many organisms use hibernation factor proteins to inhibit protein synthesis protect their ribosomes from damage 1,2 . In bacteria, two families of factors have been described, but the low conservation these huge diversity species, habitats environmental stressors confounded discovery 3–6 Here, by combining cryogenic electron microscopy, genetics biochemistry, we identify Balon, a new in cold-adapted bacterium Psychrobacter urativorans...

10.1038/s41586-024-07041-8 article EN cc-by Nature 2024-02-14

A screen of 37 compounds identified four inhibitors that exhibited dual on-target activity against <italic>Mycobacterium tuberculosis</italic> aminoacyl-tRNA synthetases.

10.1039/c9md00347a article EN MedChemComm 2019-01-01

Abstract Antibiotic resistance is a major problem of tuberculosis treatment. This provides the stimulus for search novel molecular targets and approaches to reduce or forestall emergence in Mycobacterium . Earlier, we discovered small-molecular inhibitor among 3-phenyl-5-(1-phenyl-1H-[1,2,3]triazol-4-yl)-[1,2,4]oxadiazoles targeting simultaneously two enzymes—mycobacterial leucyl-tRNA synthetase (LeuRS) methionyl-tRNA (MetRS), which are promising antibiotic development. Unfortunately,...

10.1038/s41598-021-86562-y article EN cc-by Scientific Reports 2021-03-30

Abstract The homochirality of amino acids is vital for the functioning translation apparatus. l-Amino predominate in proteins and d-amino usually represent diverse regulatory functional physiological roles both pro- eukaryotes. Aminoacyl-tRNA-synthetases (aaRSs) ensure activation proteinogenic or nonproteinogenic attach them to cognate noncognate tRNAs. Although many editing mechanisms by aaRSs have been described, data about protective role incorporation remained unknown. Tyrosyl-...

10.1093/nar/gkz756 article EN cc-by Nucleic Acids Research 2019-08-21

Staphylococcus aureus is one of the most dangerous nosocomial pathogens which cause a wide variety hospital-acquired infectious diseases. S. considered as superbug due to development multidrug resistance all current therapeutic regimens. Therefore, discovery antibiotics with novel mechanisms action combat staphylococcal infections high priority for modern medicinal chemistry. Nowadays, aminoacyl-tRNA synthetases are promising molecular targets antibiotic development. In present study, we...

10.1021/acsomega.1c03789 article EN cc-by-nc-nd ACS Omega 2021-09-16

d-aminoacyl-tRNA-deacylase (DTD) prevents the incorporation of d-amino acids into proteins during translation by hydrolyzing ester bond between mistakenly attached amino and tRNAs. Despite extensive study this proofreading enzyme, precise catalytic mechanism remains unknown. Here, a combination biochemical computational investigations has enabled discovery new substrate-assisted d-Tyr-tRNATyr hydrolysis Thermus thermophilus DTD. Several functional elements substrate, misacylated tRNA,...

10.1042/bcj20180910 article EN Biochemical Journal 2019-02-04

Keywords: D-amino acids, D-Tyr-tRNATyr-deacylase from T. thermophilus, cloning, expression, purification.

10.7124/bc.0008de article EN Biopolymers and Cell 2015-06-20

Keywords: aminoacyl-tRNA-synthetase, AlaRS from T. thermophilus, expression of recombinant protein, protein purification

10.7124/bc.00098e article EN Biopolymers and Cell 2018-12-28
Coming Soon ...