Nagendra K. Sharma

ORCID: 0000-0003-0901-0523
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About
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Research Areas
  • Crystallization and Solubility Studies
  • X-ray Diffraction in Crystallography
  • DNA and Nucleic Acid Chemistry
  • Chemical Synthesis and Analysis
  • Catalytic C–H Functionalization Methods
  • Advanced biosensing and bioanalysis techniques
  • Sulfur-Based Synthesis Techniques
  • Synthesis and Catalytic Reactions
  • Click Chemistry and Applications
  • RNA Interference and Gene Delivery
  • Crystallography and molecular interactions
  • Molecular Sensors and Ion Detection
  • Chemical Synthesis and Reactions
  • Synthesis and Characterization of Heterocyclic Compounds
  • Carbohydrate Chemistry and Synthesis
  • RNA and protein synthesis mechanisms
  • Photochromic and Fluorescence Chemistry
  • Organoselenium and organotellurium chemistry
  • Luminescence and Fluorescent Materials
  • Chemical Reactions and Isotopes
  • Asymmetric Synthesis and Catalysis
  • Fluorine in Organic Chemistry
  • Oxidative Organic Chemistry Reactions
  • Advanced Synthetic Organic Chemistry
  • Synthesis and Biological Evaluation

National Institute of Science Education and Research
2016-2025

Homi Bhabha National Institute
2018-2025

Medanta The Medicity
2022

Cancer Institute (WIA)
2022

Amity University
2018

Rabindranath Tagore Medical College
2016

Institute of Physics
2014

University of Utah
2010

National Chemical Laboratory
2003-2005

An efficient method for Pd-catalyzed site-selective C(sp 2 )–H chalcogenation of α-amino acids/peptides with disulfides and diselenides in moderate to good yields is presented.

10.1039/d2qo01876d article EN Organic Chemistry Frontiers 2023-01-01

Kynurenine metabolites are derived from the aromatic amino acid, tryptophan, and their chemical synthesis has been sought to understand tryptophan-kynurenine-based biochemical reactions that could provide opportunities for exploring therapeutic values. This report describes of kynurenine (kyn) derivatives tryptophan-containing peptides using versatile hypervalent iodine reagent, phenyliodine(III)diacetate (PIDA), through C-C bond fragmentation tryptophan's indole ring. However, BocNH-Trp-OH...

10.1039/d5ob00057b article EN Organic & Biomolecular Chemistry 2025-01-01

This report describes a Pd-catalyzed picolinamide-directed site-selective C(sp

10.1021/acs.joc.4c00988 article EN The Journal of Organic Chemistry 2024-06-26

Study of self-assembly PNA TC8 monitored by UV thermal transition at 295 nm indicates formation a C–C+ tetraplex (i-motif) in acidic pH, with higher stability than the analogous dTC8

10.1039/b506870c article EN Chemical Communications 2005-01-01

Isopentenyl diphosphate isomerase (IDI) catalyzes the interconversion of isopentenyl (IPP) and dimethylallyl (DMAPP), basic five-carbon building blocks isoprenoid molecules. Two structurally unrelated classes IDIs are known. Type I IPP (IDI-1) utilizes a divalent metal in protonation-deprotonation reaction. In contrast, type II enzyme (IDI-2) requires reduced flavin, raising possibility that reaction catalyzed by IDI-2 involves net addition or abstraction hydrogen atom. As part our studies...

10.1021/bi100844e article EN Biochemistry 2010-06-18

This report describes the Pd-catalyzed late-stage chalcogenation of tryptophan-containing peptides with disulfides/diselenides in moderate to good yields. It comprises broad substrate scope, functional group diversity, modification drug molecules, and various valuable synthetic transformations, including room temperature easy removal picolinamide auxiliary, which could be applicable tune structure function peptides.

10.1021/acs.joc.3c01657 article EN The Journal of Organic Chemistry 2023-10-26

An unusual hydrolysis/solvolysis of the classical acyclic amide bond, derived from N-troponylaminoethylglycine (Traeg) and α-amino acids, is described under mild acidic conditions. The reactivity this bond possibly owed to protonation troponyl carbonyl functional group. results suggest that Traeg amino acid a potential candidate for protecting caging amine group bioactive molecules via cleavable bond.

10.1021/acs.orglett.5b01535 article EN Organic Letters 2015-08-07

An organic acid, salicylic and its derivatives are constituents of various natural products possessing remarkable bioactivity. O-Acetyl salicylate (aspirin) is a well-known life-saving drug. Its peptide derivative salicylamide has also been explored in the designing peptide-based therapeutic drugs. base, picolylamine recently for diagnostic probes. However, both acid base have common features as metal chelating with coordinating metals. Thus, these scaffolds could be used inhibitors...

10.1021/acsomega.3c03404 article EN cc-by-nc-nd ACS Omega 2023-08-08

Mono-ortho-arylated arylamines are constituents of various natural products but their syntheses challenging. This report describes a new synthetic methodology for the ortho-arylation and α-aromatic amino acids (phenylglycine phenylalanine) through Pd-catalyzed C(sp2)-H activation using transient directing group diethoxyethyl-L-proline (DEP). A catalytic amount is sufficient to form mono-arylated as major aryliodides. method could be useful synthesis biphenyl amines novel peptidomimetics.

10.1039/d2ob02145e article EN Organic & Biomolecular Chemistry 2023-01-01

Boron-dipyrromethene (BODIPY) fluorophore derivatives were prepared from a Pyrromethene scaffold and di-fluoroboron. To add to the range of biocompatible fluorophores, this report describes synthesis photophysical studies carboxylate-functionalized BODIPY analogues natural products, Tropolone α-amino acids, through N,O-chelation. The structure few was confirmed by single crystal X-ray studies. UV/fluorescence revealed their fluorescence behaviors in organic solvents with quantum yield...

10.1039/c9ob00915a article EN Organic & Biomolecular Chemistry 2019-01-01

This report presents a silver-mediated site-selective chalcogenation of tryptophan-containing peptides with various dichalcogenides (disulfides/diselenides) at room temperature in good to excellent yields. The significant features include broad substrate scope, functional group diversity, late-stage modification drug molecules (Dopamine and Levodopa), valuable postsynthetic transformations under mild conditions.

10.1021/acs.joc.4c01730 article EN The Journal of Organic Chemistry 2024-10-07

1 H and 13 C nmr results for 1,2-oxathiane 2-oxide eight derivatives are reported. It is concluded that these molecules have a high preference chair forms with axial S=O groups, even when sterically bulky group such as phenyl substituted in syn-axial orientation to the exocyclic oxygen.

10.1139/v77-008 article EN Canadian Journal of Chemistry 1977-01-01

The instability of an amide bond with dilute trifluoroacetic acid (TFA) is a rare chemical event. native bonds are stable even in the neat TFA, which one reagents that releases peptides from solid support solid-supported peptide synthesis method. In repertoire unnatural peptidomics, α-/β-hydrazino acids and their explored for N-amino derivatives, TFA (∼100%) as natural bonds. This report describes β-hydrazino analogue β-troponylhydrazino acid, containing nonbenzenoid troponyl scaffold....

10.1021/acsomega.0c03729 article EN publisher-specific-oa ACS Omega 2020-10-01

New PNA analogues derived from aminoethylpyrrolidin-5-one backbone show stabilization of aepone-PNA:DNA hybrids and destabilization the corresponding RNA compared to unmodified PNA.

10.1039/b307362a article EN Chemical Communications 2003-01-01

Nucleic (DNA) acids having contiguous stretch of G sequence form quadruplex structure, which is very critical to control cell division. Recently the existence G-quadruplex in RNA also reported presence monovalent metal ion. PNA a promising DNA analogue binds strongly PNA:DNA duplex or PNA(2):DNA triplex. forms quadruplexes such and i-motif C-rich sequences respectively. aep-PNA containing prolyl ring one several analogues that provide rigidity chirality backbone has binding affinity natural...

10.1039/c0ob00528b article EN Organic & Biomolecular Chemistry 2010-11-15

The conversion of troponyl alkylglycinate acid/ester/amide derivatives (Trag acid/ester/amide) into cationic lactones (CTLs) in the presence trifluoroacetic acid and their amidation with amines is described. reversible Trag amides, that is, cleavage reformation amide bond via CTLs demonstrated. direct esters amino group esters/peptide achieved. amine hydroxyl selective over esterification. stable under basic ester hydrolysis Fmoc removal conditions. Hence, alkylglycinates could be applicable...

10.1021/acsomega.7b01540 article EN publisher-specific-oa ACS Omega 2018-01-25

Abstract Tropolone (2‐hydroxycyclohepta‐2,4,6‐triene‐1‐one and tautomer) is a non‐benzenoid bioactive natural chromophore with pH‐dependent fluorescence character extraordinary metal binding affinities, especially transition‐metal ions Cu 2+ /Zn /Ni . This report describes the syntheses biophysical studies of new tropolonyl thymidine [(4(5)‐hydroxy‐5(4)‐oxo‐5(4) H ‐cyclohepta‐1,3,6‐trienyl)thymidine] ( tr ‐T) nucleoside corresponding tropolone‐conjugated DNA oligonucleotides that form B‐form...

10.1002/cbic.201800822 article EN ChemBioChem 2019-01-24

The cleavage of amide bonds under mild acidic conditions is a rare chemical event. N-Acetamide bond peptides extremely stable even the strongest organic acid trifluoromethanesulfonic acid. This report mechanistically describes new cleavable in 4-aminopyrazolyloxy acetamide peptide analogues such as trifluoroacetic (10–20%) or HCl (0.1–4.0 N) at room temperature, and formation unusual lactam from acetic after evaporation solvent. event bond, which could be explored acid-sensitive protecting...

10.1021/acs.joc.9b00535 article EN The Journal of Organic Chemistry 2019-04-10

The scarcity of novel bioactive molecules against multidrug-resistant (MDR) bacterial strains like Pseudomonas aeruginosa is alarming. This virulence regulated via Quorum sensing (QS), a cell-cell communication process. Disabling QS circuits (las, pqs, rhl) with small has been proposed as potential strategy to prevent pathogenicity. focuses on interruption virulence, rather than killing them tackle the drug resistance problem. Herein, we describe synthesis rationally designed...

10.1002/asia.202200866 article EN Chemistry - An Asian Journal 2022-10-12

<italic>N</italic>-arylated peptides as peptoids influence the structural and conformational changes of small that lead to unique foldamers, even in di-/tri-peptides.

10.1039/d0ce01386b article EN CrystEngComm 2020-11-12
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