Mark P. Waldrop

ORCID: 0000-0003-1829-7140
Publications
Citations
Views
---
Saved
---
About
Contact & Profiles
Research Areas
  • Climate change and permafrost
  • Peatlands and Wetlands Ecology
  • Microbial Community Ecology and Physiology
  • Soil Carbon and Nitrogen Dynamics
  • Cryospheric studies and observations
  • Methane Hydrates and Related Phenomena
  • Geology and Paleoclimatology Research
  • Polar Research and Ecology
  • Indigenous Studies and Ecology
  • Atmospheric and Environmental Gas Dynamics
  • Coastal wetland ecosystem dynamics
  • Mycorrhizal Fungi and Plant Interactions
  • Gut microbiota and health
  • Bacteriophages and microbial interactions
  • Fire effects on ecosystems
  • Soil and Water Nutrient Dynamics
  • Geological Studies and Exploration
  • Forest Ecology and Biodiversity Studies
  • Genomics and Phylogenetic Studies
  • Plant and Fungal Interactions Research
  • Enzyme-mediated dye degradation
  • Plant Ecology and Soil Science
  • Landslides and related hazards
  • Isotope Analysis in Ecology
  • Botany and Plant Ecology Studies

United States Geological Survey
2016-2025

Geology, Minerals, Energy, and Geophysics Science Center
2020-2024

Pacific Science Center
2015-2022

Pacific Island Ecosystems Research Center
2009-2021

Government of the United States of America
2021

Menlo School
2012-2019

California Water Science Center
2015-2019

University of Alaska Fairbanks
2019

Oak Ridge National Laboratory
2013

University of Michigan
2004-2007

Abstract [1] This synthesis addresses the vulnerability of North American high-latitude soil organic carbon (SOC) pool to climate change. Disturbances caused by warming in arctic, subarctic, and boreal environments can result significant redistribution C among major reservoirs with potential global impacts. We divide current northern SOC pools into (1) near-surface soils where is affected seasonal freeze-thaw processes changes moisture status, (2) deeper permafrost peatland strata down...

10.1029/2010jg001507 article EN cc-by Journal of Geophysical Research Atmospheres 2011-07-27

Nitrification and denitrification processes are crucial to plant nutrient availability, eutrophication greenhouse gas production both locally globally. Unravelling the major environmental predictors for nitrification is thus pivotal in order understand model nitrogen (N) cycling. Here, we sampled five community types characteristic of interior Alaska, including black spruce, bog birch, tussock grass two fens. We assessed abundance functional genes affiliated with (bacterial archaeal amoA)...

10.1111/j.1462-2920.2011.02679.x article EN Environmental Microbiology 2012-01-09

Atmospheric nitrogen (N) deposition derived from fossil‐fuel combustion, land clearing, and biomass burning is occurring over large geographical regions on nearly every continent. Greater ecosystem N availability can result in greater aboveground carbon (C) sequestration, but little understood as to how soil C storage could be altered by deposition. High concentrations of inorganic accelerate the degradation easily decomposable litter slow decomposition recalcitrant containing amounts...

10.1890/03-5120 article EN Ecological Applications 2004-08-01

Abstract Despite decades of research, the ecological determinants microbial diversity remain poorly understood. Here, we test two alternative hypotheses concerning factors regulating fungal in soil. The first states that higher levels plant detritus production increase supply limiting resources (i.e. organic substrates) thereby increasing diversity. Alternatively, greater increases range substrates entering soil, number niches to be filled by a array heterotrophic fungi. These were...

10.1111/j.1461-0248.2006.00965.x article EN Ecology Letters 2006-09-12

Approximately 1700 Pg of soil carbon (C) are stored in the northern circumpolar permafrost zone, more than twice as much C atmosphere. The overall amount, rate, and form released to atmosphere a warmer world will influence strength feedback climate change. We used survey quantify variability perception vulnerability Experts were asked provide quantitative estimates change response four scenarios warming. For highest warming scenario (RCP 8.5), experts hypothesized that release from zone...

10.1007/s10584-013-0730-7 article EN cc-by Climatic Change 2013-03-25
Uri Neri Yuri I. Wolf Simon Roux Antônio Pedro Camargo Benjamin Lee and 95 more Darius Kazlauskas I. Min Chen Natalia Ivanova Lisa Zeigler Allen David Páez-Espino Donald A. Bryant Devaki Bhaya Mart Krupovìč Valerian V. Dolja Nikos C. Kyrpides Eugene V. Koonin Uri Gophna Adrienne B. Narrowe Alexander J. Probst Alexander Sczyrba Annegret Kohler Armand Séguin Ashley Shade Barbara J. Campbell Björn D. Lindahl Brandi Kiel Reese Breanna M. Roque Chris DeRito Colin Averill Daniel Cullen David A. C. Beck David A. Walsh David M. Ward Dongying Wu Emiley A. Eloe‐Fadrosh Eoin Brodie Erica B. Young Erik A. Lilleskov Federico Castillo Francis Martin Gary R. LeCleir Graeme T. Attwood Hinsby Cadillo‐Quiroz Holly M. Simon Ian Hewson Igor V. Grigoriev James M. Tiedje Janet Jansson Janey Lee Jean S. VanderGheynst Jeff Dangl Jeff S. Bowman Jeffrey L. Blanchard Jennifer L. Bowen Jiangbing Xu Jillian F. Banfield Jody W. Deming Joel E. Kostka John Gladden Josephine Z. Rapp Joshua Sharpe Katherine D. McMahon Kathleen K. Treseder Kay D. Bidle Kelly C. Wrighton Kimberlee Thamatrakoln Klaus Nüsslein Laura K. Meredith Lucı́a Ramı́rez Marc Buée Marcel Huntemann Marina Kalyuzhnaya Mark P. Waldrop Matthew B. Sullivan Matthew O. Schrenk Matthias Hess Michael Vega Michelle O’Malley Mónica Medina Naomi E. Gilbert Nathalie Delherbe Olivia U. Mason Paul Dijkstra Peter F. Chuckran Petr Baldrián Philippe Constant Ramūnas Stepanauskas Rebecca A. Daly Regina Lamendella Robert J. Gruninger Robert M. McKay Samuel Hylander Sarah L. Lebeis Sarah P. Esser Silvia G. Acinas Steven S. Wilhelm Steven W. Singer Susannah G. Tringe Tanja Woyke T. B. K. Reddy

High-throughput RNA sequencing offers broad opportunities to explore the Earth virome. Mining 5,150 diverse metatranscriptomes uncovered >2.5 million virus contigs. Analysis of >330,000 RNA-dependent polymerases (RdRPs) shows that this expansion corresponds a 5-fold increase known diversity. Gene content analysis revealed multiple protein domains previously not found in viruses and implicated virus-host interactions. Extended RdRP phylogeny supports monophyly five established phyla reveals...

10.1016/j.cell.2022.08.023 article EN cc-by-nc-nd Cell 2022-09-28

In permafrost (perennially frozen ground) microbes survive oligotrophic conditions, sub-zero temperatures, low water availability and high salinity over millennia. Viable life exists in tens of thousands years old but we know little about the metabolic physiological adaptations to challenges presented by ground geologic time. this study asked whether increasing age associated stressors drive adaptive changes community composition function. We conducted deep metagenomic 16 S rRNA gene...

10.1038/ismej.2017.93 article EN cc-by-nc-nd The ISME Journal 2017-07-11

Permafrost degradation in peatlands is altering vegetation and soil properties impacting net carbon storage. We studied four adjacent sites Alaska with varied permafrost regimes, including a black spruce forest on peat plateau permafrost, two collapse scar bogs of different ages formed following thermokarst, rich fen without permafrost. Measurements included year-round eddy covariance estimates dioxide (CO

10.1111/gcb.17139 article EN cc-by-nc-nd Global Change Biology 2024-01-01
Coming Soon ...