Shiva Mirkalantari

ORCID: 0000-0003-2158-8598
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Research Areas
  • Antibiotic Resistance in Bacteria
  • Vibrio bacteria research studies
  • Bacterial biofilms and quorum sensing
  • Gut microbiota and health
  • Escherichia coli research studies
  • Probiotics and Fermented Foods
  • Enterobacteriaceae and Cronobacter Research
  • Legionella and Acanthamoeba research
  • Pharmaceutical and Antibiotic Environmental Impacts
  • Essential Oils and Antimicrobial Activity
  • Urinary Tract Infections Management
  • Bacteriophages and microbial interactions
  • Ocular Infections and Treatments
  • Bacterial Identification and Susceptibility Testing
  • Phytochemicals and Medicinal Plants
  • Reproductive tract infections research
  • Bacterial Genetics and Biotechnology
  • Water Treatment and Disinfection
  • Helicobacter pylori-related gastroenterology studies
  • Herpesvirus Infections and Treatments
  • Streptococcal Infections and Treatments
  • Epigenetics and DNA Methylation
  • Identification and Quantification in Food
  • Enhanced Recovery After Surgery
  • Inflammatory Biomarkers in Disease Prognosis

Iran University of Medical Sciences
2017-2024

Biotechnology Research Center
2020-2021

Islamic Azad University, Damghan Branch
2020

Semnan University of Medical Sciences
2015-2018

Abstract Background Colorectal cancer (CRC) is one of the most common cancers all over world, and dysbiosis in gut microbiota may play a role colorectal carcinogenesis. Bacteroides fragilis can lead to tumorigenesis by changing signaling pathways, including WNT/β-catenin pathway. Therefore, present study, we investigated correlation between enterotoxigenic B. amount expression pathway genes involved CRC. Materials methods was determined 30 tumors adjacent healthy tissues qPCR method. Next,...

10.1186/s13027-023-00523-w article EN cc-by Infectious Agents and Cancer 2023-08-29

Introduction: The extensive drug-resistant (XDR) Pseudomonas aeruginosa ( P. ) causes a range of infections with high mortality rate, which inflicts additional costs on treatment. use nano-biotechnology-based methods in medicine has opened new perspective against bacteria. aim this study was to evaluate the effectiveness AgNO3 nanoparticles alone and conjugated imipenem (IMI) combat extensively . Methods: Antibiotic susceptibility carried out using disc diffusion method. Detection different...

10.2147/ijn.s260520 article EN cc-by-nc International Journal of Nanomedicine 2020-09-01

Antibiotic resistance due to transferable genes is one of the most important concerns in Klebsiella pneumoniae isolated from nosocomial infections. Eighty-eight K. isolates were confirmed through biochemical methods. In addition, antimicrobial susceptibility testing was performed using a disc-diffusion method. Extended-spectrum β-lactamase production among screened double-disc synergism test, and identified PCR. The eight loci for multiple-locus variable number tandem repeat analysis (MLVA)...

10.1016/j.nmni.2020.100693 article EN cc-by-nc-nd New Microbes and New Infections 2020-05-14

Fusobacterium nucleatum has been recognized as an important key bacterium in the cause and spread of colorectal carcinogenesis. Nevertheless, clinical relevance F. cancer (CRC) its effect on immune factors tumor microenvironment have not fully elucidated.The frequency was measured 100 paired normal tissue specimens by TaqMan quantification Real-Time Polymerase Chain Reaction (qPCR). The mRNA expression levels cytokines (IL-6, IL-10, IL-12β, IL-17, TNF-α, TLR-2, TLR-4), miRNAs (miR-21,...

10.3389/fmicb.2023.1302719 article EN cc-by Frontiers in Microbiology 2023-11-23

Background : The rise of drug‐resistant bacteria poses a significant challenge to global healthcare, underscoring the urgent need for new therapeutic interventions. In this study, ethanolic extracts Datura stramonium and Prosopis farcta , sourced from Northern Iran, were examined their antibacterial properties against Staphylococcus aureus Escherichia coli Acinetobacter baumannii Klebsiella pneumoniae Pseudomonas aeruginosa . Methods: activities medicinal in study using disc diffusion,...

10.1155/jcpt/4815952 article EN cc-by Journal of Clinical Pharmacy and Therapeutics 2025-01-01

Introduction:The incidence of urinary tract infections caused by Extended-Spectrum Beta Lactamase (ESBL) producing Escherichia coli (E.coli) strains due to long term and overuse broad-spectrum cephalosporine is on the rise.CTX beta-lactamase type, a beta-lactamase, has been expanding in many countries.The ctx gene harbored plasmid that spread between Enterobacteriaceae family, especially E. coli.The aim this study was determine pattern antimicrobial resistance investigate prevalent ESBL...

10.19082/2686 article EN cc-by-nc-nd Electronic physician 2016-07-25

Background: Klebsiella pneumoniae as an opportunistic pathogen can be the cause of a range nosocomial and community - acquired infections. Many virulence factors help these bacteria overcome immune system various diseases. K1 K2 capsular antigens, also magA, wcaG, rmpA are well known K. factors. has been revealed to have ability acquire resistance many antibiotics, which treatment failure. Objectives: This study aimed at determining prevalence rmpA, Capsular type K1, K2, TEM, SHV in...

10.5812/jjm.63637 article EN Jundishapur Journal of Microbiology 2018-06-09

During the last decade, probiotic research has progressed considerably and significant advances have been made in selection characterization of specific strains. The most studied probiotics belong to genus Lactobacillus. In this study, 80 Lactobacillus spp. isolated from healthy women tolerated low pH were able grow presence bile salts. RAPD PCR technique resulted identification 38 different types. These isolates then evaluated based on adhesion capacity, antibiotic susceptibility tolerance...

10.1111/lam.13660 article EN Letters in Applied Microbiology 2022-01-26

Objective: Persistence is a subpopulation of bacteria that can tolerate high doses antibiotics by undergoing period dormancy. This study aimed to investigate the hypothetical role toxin/antitoxin systems in persister cell formation Klebsiella pneumoniae ATCC 13883 evaluating toxins type II expression. Methods: To determine number surviving cells, bacterial colonies were counted at 1, 3, 5, 7, and 24 h after treated with lethal dose kanamycin. The was then determined ( relE1 , relE2 hipA vapC...

10.1097/mrm.0000000000000232 article EN Reviews in Medical Microbiology 2020-07-08

Escherichia coli (E. coli) O25b/ST131 clone causes urinary tract infection (UTI) and is associated with a broad spectrum of other infections, such as intra-abdominal soft tissue that can be affecting bloodstream infections. Therefore, since has been reported in several studies from Iran, the current study, we have investigated molecular characteristics, typing, biofilm formation type E. collected UTI specimens.A total 173 isolates were collected. The susceptibility to all fourth generations...

10.1186/s12941-022-00526-2 article EN cc-by Annals of Clinical Microbiology and Antimicrobials 2022-08-04

Probiotics promote a healthy balance of gut bacteria and have many beneficial effects on human digestive physiology. Although, few side probiotics been reported. This study aimed to assess the safety five probiotic candidate Lactobacillus strains isolated from individuals by examining mutagenicity, genotoxicity, oral toxic effects.Five selected (SCPs) were evaluated for genotoxicity (Ames test with Salmonella typhimurium), in vitro mammalian chromosome aberration an vivo mouse micronucleus...

10.1002/jcla.24481 article EN Journal of Clinical Laboratory Analysis 2022-05-17

The use of probiotics is emerging as an innovative approach to managing oral health issues and mediating the immune system. current study assessed

10.3389/fmicb.2024.1383959 article EN cc-by Frontiers in Microbiology 2024-05-30

Escherichia coli ST131 is a pandemic clone with high antibiotic resistance, and it major causative agent of urinary tract infection (UTI) bloodstream infections. This study evaluated the distribution expression virulence genes genotyping E. O25b/ST131 by Multi-locus variable number tandem repeat analysis (MLVA) method among UTI in patients at Tehran hospitals, Iran.A total 107 isolates were collected from patients. Polymerase chain reaction (PCR) amplification pabB gene was used to identify...

10.1556/030.2022.01826 article EN Acta Microbiologica et Immunologica Hungarica 2022-09-21

Background: CTX-M is the most prevalent and rapidly growing type of extended-spectrum β-lactamase (ESBL) family CTX-M1 common blaCTX-M. Objectives: The current study aimed at investigating genetic diversity CTX-M-1-producing Klebsiella pneumoniae circulating in Semnan, Iran evaluated by multilocus variable-number tandem repeat analysis (MLVA). Methods: A total 110 isolates K. were collected from different clinical samples. antibiotic suceptibility double disk synergy test determined...

10.5812/jjm.63131 article EN Jundishapur Journal of Microbiology 2018-07-07

Background & objective: Acinetobacter baumannii is an opportunistic pathogen with high pathogenic and antibiotic-resistance potential also considered as one of the main nosocomial agents, specifically in intensive care units (ICUs).It highly important to use molecular biology methods epidemiological studies, determine source infection, understand relationships distributional patterns pathogens.Therefore, current study aimed determining similar types A. species isolated from patients Tehran,...

10.30699/ijp.13.2.144 article EN cc-by Iranian journal of pathology 2018-04-01

Introduction: Plasmid-mediated quinolone resistance (PMQR) is a growing clinical concern throughout the world. The purpose of this study was to detect qnr-encoding genes and evaluate clonal relatedness qnr-positive Klebsiella pneumoniae isolates. Materials Methods: A total 88 K. isolates assessed which were obtained from Tehran hospital in Tehran, Iran. Bacterial identification administrated using standard laboratory methods. Quinolone determined Kirby-Bauer disk diffusion method according...

10.30491/jabr.2020.120187 article EN Journal of Applied Biotechnology Reports 2020-12-01

Background and Objectives: Endometriosis is defined as the presence of endometrial tissue outside uterine cavity. Pe- ripheral blood monocytes cells (PBMCs) may have altered function to some extent in women with endometriosis. Lactoba- cillus acidophilus a probiotic bacterium within human bodywith ability alleviating many inflammatory diseases. Here, we examined effect L. on PBMCs endometriosis patients.
 Materials Methods: In this study, peripheral samples were obtained from patients...

10.18502/ijm.v14i5.10965 article EN cc-by-nc Iranian Journal of Microbiology 2022-10-24

Background: Treatment of ocular infection by fungi has become a problematic issue, particularly in deep lesion cases, because the limited available antifungals and emerging resistance species. Objectives: The present study was designed for molecular identification studying antifungal susceptibility pattern fungi. Methods: Fifty-three fungal isolates, including Fusarium spp., Aspergillus yeast dematiaceous were collected. Initial each sample performed using routine mycological techniques....

10.5812/jjm.99922 article EN Jundishapur Journal of Microbiology 2020-04-05

Prevalence Determination of Virulence Related and Biofilm Formation Genes in Acinetobacter baumannii Isolates from Clinical Respiratory Samples Imam Khomeini Hospital, Tehran, Iran 2018

10.30699/ijmm.15.3.266 article EN cc-by-nc Iranian Journal of Medical Microbiology 2021-06-01
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