Xinjie Jin

ORCID: 0000-0003-3733-1957
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About
Contact & Profiles
Research Areas
  • Plant Diversity and Evolution
  • Plant and Fungal Species Descriptions
  • Air Quality and Health Impacts
  • Genomics and Phylogenetic Studies
  • Plant Taxonomy and Phylogenetics
  • Bryophyte Studies and Records
  • Genetic diversity and population structure
  • Peatlands and Wetlands Ecology
  • Plant responses to elevated CO2
  • Noise Effects and Management
  • Plant Pathogens and Fungal Diseases
  • Covalent Organic Framework Applications
  • Urban Heat Island Mitigation
  • Advanced Photocatalysis Techniques
  • Botany and Plant Ecology Studies
  • Phytochemistry and Biological Activities
  • Ecology and Vegetation Dynamics Studies
  • Microplastics and Plastic Pollution
  • Lichen and fungal ecology
  • Plant biochemistry and biosynthesis
  • Phytochemical Studies and Bioactivities
  • RNA and protein synthesis mechanisms
  • Plant and animal studies
  • Land Use and Ecosystem Services
  • Hemiptera Insect Studies

Wenzhou University
2022-2025

Shanghai Chenshan Plant Science Research Center
2025

Nanjing Forestry University
2024

Henan Normal University
2022-2023

East China Normal University
2018-2022

Zhejiang University
2014-2017

Qilu Normal University
2016

Zhejiang A & F University
2012

Rehmannia chingii is an important medicinal plant with immense value in scientific research. However, its mitochondrial genome (mitogenome) has not yet been characterized. Herein, based on whole-genome Illumina short reads and PacBio HiFi reads, we obtained the complete mitogenome of R. through a de novo assembly strategy. We carried out comparative genomic analyses found that, comparison plastid (plastome) showing high degree structural conservation, structure relatively complex, intricate...

10.3390/genes15010098 article EN Genes 2024-01-15

Summary Tethyan plant disjunctions, including Mediterranean–African–Asian are thought to be vicariant, but their temporal origin and underlying causes remain largely unknown. To address this issue, we reconstructed the evolutionary history of S milax aspera , a hypothesized component European Tertiary laurel forest flora. Thirty‐eight populations herbarium specimens representing 57 locations across species range were sequenced at seven plastid regions nuclear ribosomal internal transcribed...

10.1111/nph.12910 article EN New Phytologist 2014-06-27

Abstract Marchantiopsida (complex thalloid liverworts) are one of the earliest lineages embryophytes (land plants), and well‐known for their air pores chambers, pegged rhizoids, absence organellular RNA editing sites. Despite importance to an understanding early embryophyte evolution, many key nodes within this class remain poorly resolved, owing paucity genetic loci previously available phylogenetic analyses. Here, we sequenced 54 plastomes, representing 28 genera, nearly all families,...

10.1111/cla.12513 article EN Cladistics 2022-07-02

Abstract Background Engelhardia (Juglandaceae) is a genus of significant ecological and economic importance, prevalent in the tropics subtropics East Asia. Although previous efforts based on multiple molecular markers providing profound insights into species delimitation phylogeography , maternal genome evolution phylogeny Juglandaceae still need to be comprehensively evaluated. In this study, we sequenced plastomes from 14 samples eight outgroup Rhoiptelea chiliantha incorporated published...

10.1186/s12870-024-05293-0 article EN cc-by BMC Plant Biology 2024-07-06

Abstract Feruloyl esterases (FEs, EC 3.1.1.73) play a crucial role in biological synthesis and metabolism. However, the identification of versatile FEs, capable catalyzing wide range substrates, remains challenge. In this study, we obtained 2085 FE sequences from BRENDA database initiated with an enzyme similarity network analysis, revealing three main clusters (1–3). Notably, both cluster 1 3 included characterized which exhibited significant differences sequence length. Subsequent...

10.1186/s40643-024-00835-8 article EN cc-by Bioresources and Bioprocessing 2025-01-29

Abstract The angiosperm tribe of Elsholtzieae (Lamiaceae) is characterized by complex inflorescences and has notable medicinal economic significance. Relationships within Elsholtzieae, including the monophyly Elsholtzia Keiskea , relationships among Mosla Perilla remain uncertain, hindering insights into inflorescence evolution tribe. Using hybridization capture sequencing deep genome skimming data analysis, we reconstruct a phylogeny using 279 orthologous nuclear loci from 56 species. We...

10.1111/cla.12604 article EN Cladistics 2025-02-18

Though with bioaccumulation and toxicity, chlorinated paraffins (CPs) are still high produced widely utilized in various daily necessities for extender plasticization flame retardation. CPs can be released during the reprocessing processes of finishing materials distributed multi-environmental media. Herein, concentrations compositions four representative media including interior materials, PM10, total suspended particulate (TSP), dust samples collected from eight stages were studied....

10.1016/j.envint.2023.108072 article EN cc-by Environment International 2023-06-28

Schnabelia species, herbaceous perennial plants within the Lamiaceae family, possess medicinal value and are endemic to China. While previous studies have focused on morphological classification, molecular systematics, components, there has been limited research phylogenomics. To reveal their plastid genome characteristics phylogenetic relationships, we sequenced assembled plastomes of all five species (S. oligophylla, S. tetrodonta, nepetifolia, terniflora, aureoglandulosa), conducted...

10.1186/s12870-025-06647-y article EN cc-by-nc-nd BMC Plant Biology 2025-05-07

Understanding how the complexities of biodiversity are maintained on islands has long been one central issues studied in conservation biology. With global onset anthropogenically driven changes, influence anthropogenic activities challenges applicability widely accepted Equilibrium Theory Island Biogeography (ETIB). This study aimed to test island area, isolation (MD: distance mainland, and ND: nearest island), human (habitat heterogeneity, proportion road area relative refer impact island)...

10.1016/j.baae.2023.07.006 article EN cc-by-nc-nd Basic and Applied Ecology 2023-07-16

A new species, Smilax weniae (Smilacaceae), from Southwest China, is described and illustrated. The species bears peltate leaves, which was previously a unique feature of S. luei. However, it differs the latter by having broad ovate leaf blade, longer peduncle, sexual dimorphic flowers. Further phylogenetic analyses revealed that were placed in position subclade Old World based on ptDNA nrITS sequences. Combining detailed morphological comparisons molecular evidence, we validated an...

10.3390/plants11081032 article EN cc-by Plants 2022-04-11

Phylogenetic relationships among Chinese species of Morella (Myricaceae) are unresolved. Here, we use restriction site-associated DNA sequencing (RAD-seq) to identify candidate loci that will help in determining phylogenetic rubra, M. adenophora, nana and esculenta. Three methods for inferring phylogeny, maximum parsimony (MP), likelihood (ML) Bayesian concordance, were applied data sets including as many 4253 RAD with 8360 informative variable sites. All three significantly favored the...

10.1371/journal.pone.0139840 article EN cc-by PLoS ONE 2015-10-02

Urban plants are regarded as an effective agent to control particulate matter (PM) pollution by absorbing PM. Repeated PM and drought stress in urban areas often cause morphological physiological damage plants, resulting lower ecological benefits. Nevertheless, knowledge retention capability, morphology physiology of under repeated cross has been barely available. In order investigate changes these aspects stress, we applied periodic with severe exhaust exposure on Photinia × fraseri Dress...

10.1016/j.ecoenv.2022.113807 article EN cc-by Ecotoxicology and Environmental Safety 2022-06-27

(Ebenaceae) is a widely distributed genus of trees and shrubs from pantropical to temperate regions, with numerous species valued for their fruits (persimmons), timber, medicinal values. However, information regarding plastomes chloroplast evolution scarce. The present study performed comparative genomic evolutionary analyses on 45 accepted

10.1002/ece3.10301 article EN cc-by Ecology and Evolution 2023-07-01

Phylogenomics have been widely used to resolve ambiguous and controversial evolutionary relationships among plant species genera, the identification of unique indels in plastomes may even help understand evolution some families. Menispermum L. (Menispermaceae) consists three species, M. dauricum DC., canadense L., mexicanum Rose, which are disjuncly distributed East Asia, Eastern North America Mexico. Taxonomists continue debate whether is a distinct variety dauricum, or simply synonym...

10.3389/fpls.2023.1116300 article EN cc-by Frontiers in Plant Science 2023-02-22
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