Lijun Dong

ORCID: 0000-0003-4303-5513
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Research Areas
  • Marine animal studies overview
  • Underwater Acoustics Research
  • Animal Vocal Communication and Behavior
  • Arctic and Antarctic ice dynamics
  • Coral and Marine Ecosystems Studies
  • Marine and fisheries research
  • Underwater Vehicles and Communication Systems
  • Cephalopods and Marine Biology
  • Advanced Optical Sensing Technologies
  • Genomics and Phylogenetic Studies
  • Advanced Fiber Laser Technologies
  • Noise Effects and Management
  • Marine and coastal plant biology
  • Optical Coherence Tomography Applications
  • Optical Systems and Laser Technology
  • Physiological and biochemical adaptations
  • Antenna Design and Optimization
  • Advanced MIMO Systems Optimization
  • RNA and protein synthesis mechanisms
  • Photonic Crystal and Fiber Optics
  • Identification and Quantification in Food
  • Caching and Content Delivery
  • Ichthyology and Marine Biology
  • Geological and Geophysical Studies
  • Q Methodology Applications

Institute of Deep-Sea Science and Engineering
2017-2025

Chinese Academy of Sciences
2014-2025

Air Force Medical University
2025

Jinan University
2024

Huawei Technologies (United States)
2021-2024

University of Aberdeen
2021

Institute of Hydrobiology
2010-2019

Chinese Academy of Fishery Sciences
2019

Shanghai Ocean University
2019

University of Chinese Academy of Sciences
2010-2014

Kevin Darras Rodney A. Rountree Steven L. Van Wilgenburg Anna F. Cord Frederik Pitz and 95 more Youfang Chen Lijun Dong Agnès Rocquencourt Camille Desjonquères Paula Trujillo Díaz Tzu‐Hao Lin Théophile Turco Louise Emmerson Tom Bradfer‐Lawrence Amandine Gasc Sarah A. Marley M.R.J. Salton Laura Schillé Paul J. Wensveen Shih‐Hung Wu Adriana Carolina Acero-Murcia Orlando Acevedo‐Charry Matyáš Adam Jacopo Aguzzi Irmak Akoglu M. Clara P. Amorim Mina Anders M. André Alexandre Antonelli Leandro Do Nascimento Giulliana Appel Stephanie K. Archer Christos Astaras Andrey Atemasov Jamieson Atkinson Joël Attia Emanuel Ștefan Baltag Luc Barbaro Fritjof Basan Carly Batist Júlio Baumgarten Just T. Bayle‐Sempere Kristen Bellisario A David Oded Berger‐Tal Frédéric Bertucci Matthew G. Betts Iqbal Singh Bhalla Thiago Bicudo Marta Bolgan Sara Bombaci Gérard Bota Martín Boullhesen Robert A. Briers Susannah J. Buchan Michał Budka Kenneth W. Burchard Giuseppa Buscaino Alice Calvente Marconi Campos‐Cerqueira Maria Isabel Carvalho Gonçalves María Ceraulo Maite Cerezo‐Araujo Gunnar Cerwén Adams A. Chaskda М. Д. Чистополова Christopher W. Clark Kieran Cox Benjamin Cretois Chapin Czarnecki Luís P. da Silva Wigna da Silva Laurence H. De Clippele D. Haye Ana Silvia de Oliveira Tissiani Devin R. de Zwaan M. Eugenia Degano Jessica L. Deichmann Joaquín del Río Fernández Christian Devenish Ricardo Díaz‐Delgado Pedro Diniz Dorgival Diógenes Oliveira‐Júnior T. Dorigo Saskia Dröge Marina H. L. Duarte Adam Duarte Kerry Dunleavy Robert P. Dziak Simon Élise Hiroto Enari Haruka S. Enari Florence Erbs Britas Klemens Eriksson Pınar Ertör‐Akyazi Nina Ferrari Luane S. Ferreira Abram B. Fleishman Paulo J. Fonseca Bárbara Freitas

ABSTRACT Aim The urgency for remote, reliable and scalable biodiversity monitoring amidst mounting human pressures on ecosystems has sparked worldwide interest in Passive Acoustic Monitoring (PAM), which can track life underwater land. However, we lack a unified methodology to report this sampling effort comprehensive overview of PAM coverage gauge its potential as global research tool. To address gap, created the Worldwide Soundscapes project, collaborative network growing database...

10.1111/geb.70021 article EN cc-by Global Ecology and Biogeography 2025-05-01

Significance Divergent lineages can respond to common environmental factors through convergent processes involving shared genomic components or pathways, but the molecular mechanisms are poorly understood. Here, we provide resources and insights into evolution of mammalian adapting aquatic life. Our data suggest evolution, for example, in association with thermoregulation genes associated a surface heat barrier ( NFIA ) internal exchange SEMA3E ). Combined support previous reports showing...

10.1073/pnas.2106080118 article EN cc-by-nc-nd Proceedings of the National Academy of Sciences 2021-09-09
Kevin Darras Rodney A. Rountree Steven L. Van Wilgenburg Anna F. Cord Frederik Pitz and 95 more Youfang Chen Lijun Dong Amandine Gasc Tzu‐Hao Lin Paula Trujillo Díaz Shih‐Hung Wu M.R.J. Salton Sarah A. Marley Laura Schillé Paul J. Wensveen Camille Desjonquères Orlando Acevedo‐Charry Matyáš Adam Jacopo Aguzzi M. André Alexandre Antonelli Leandro Do Nascimento Giulliana Appel Christos Astaras Andrey Atemasov Luc Barbaro Fritjof Basan Carly Batist Adrià López‐Baucells Júlio Baumgarten Just T. Bayle‐Sempere Kristen Bellisario A David Oded Berger‐Tal Matthew G. Betts Iqbal Singh Bhalla Thiago Bicudo Marta Bolgan Sara Bombaci Martín Boullhesen Tom Bradfer‐Lawrence Robert A. Briers Michał Budka Kenneth W. Burchard Alice Calvente Maite Cerezo‐Araujo Gunnar Cerwén М. Д. Чистополова Christopher W. Clark Benjamin Cretois Chapin Czarnecki Luís P. da Silva Wigna da Silva Laurence H. De Clippele D. Haye Ana Silvia de Oliveira Tissiani Devin R. de Zwaan Ricardo Díaz‐Delgado Pedro Diniz Dorgival Diógenes Oliveira‐Júnior T. Dorigo Saskia Dröge Marina H. L. Duarte Adam Duarte Kerry Dunleavy Robert P. Dziak Simon Élise Hiroto Enari Haruka S. Enari Florence Erbs Nina Ferrari Luane S. Ferreira Abram B. Fleishman Bárbara Freitas Nicholas R. Friedman Jérémy S. P. Froidevaux Svetlana S. Gogoleva Maria Isabel Carvalho Gonçalves Carolina Gonzaga José Miguel González Correa Eben Goodale Benjamin L. Gottesman Ingo Graß Jack Greenhalgh Jocelyn Grégoire Jonas Hagge William D. Halliday Antonia Hammer Tara Hanf‐Dressler Samara M. Haver Daniel Hending J. A. Hernandez-Blanco Thomas Hiller Joe Chun‐Chia Huang Kate Hutchinson Jonathan Jackson Alain Jacot Olaf Jahn Jasper Kanes Ellen Kenchington

Abstract The urgency for remote, reliable, and scalable biodiversity monitoring amidst mounting human pressures on climate ecosystems has sparked worldwide interest in Passive Acoustic Monitoring (PAM), but there been no comprehensive overview of its coverage across realms. We present metadata from 358 datasets recorded since 1991 above land water constituting the first global synthesis sampling spatial, temporal, ecological scales. compiled summary statistics (sampling locations, deployment...

10.1101/2024.04.10.588860 preprint EN cc-by bioRxiv (Cold Spring Harbor Laboratory) 2024-04-14

Abstract The Yangtze finless porpoise ( Neophocaena asiaeorientalis ) is an endangered freshwater subspecies unique to the River basin. Seasonal variations in local distribution of animal, as well fish presence, sand dredging, ship navigation, and bridges were examined potential factors affecting occurrence animals. Passive acoustic surveys performed regularly from May 2007 August 2010, near conjunction Poyang Lake. porpoises was seasonally site‐specific. In August, animals detected more...

10.1111/j.1748-7692.2011.00490.x article EN Marine Mammal Science 2011-07-01

Passive Acoustic Monitoring (PAM) is increasingly being adopted as a non-invasive method for the assessment of ocean ecological dynamics. PAM an important sampling approach acquiring critical information about marine mammals, especially in areas where data are lacking and evaluations threats vulnerable populations required. The Indo-Pacific humpback dolphin (IPHD, Sousa chinensis) coastal species which inhabits tropical warm-temperate waters from eastern Indian Ocean throughout Southeast...

10.3389/fmars.2020.00267 article EN cc-by Frontiers in Marine Science 2020-04-28

In Yangtze finless porpoises Neophocaena phocaenoides asiaeorientalis, the effects of fatiguing noise on hearing thresholds at frequencies 32, 45, 64, and 128 kHz were investigated. The parameters were: 0.5-oct bandwidth, −1 to +0.5 oct relative test frequency, 150 dB re 1 μPa (140–160 in one measurement series), with 1–30 min exposure time. Thresholds evaluated using evoked-potential technique allowing tracing threshold variations a temporal resolution better than min. most effective was...

10.1121/1.3596470 article EN The Journal of the Acoustical Society of America 2011-07-01

Abstract During the Yangtze Freshwater Dolphin Expedition 2012, finless porpoises ( Neophocaena asiaeorientalis ) were acoustically monitored in 9 port areas at night. 6566 min of nocturnal monitoring, porpoise sonar was detected for 488 (7.43% total time). Of all 81 encounters, longest echolocation span obtained 102.9 min, suggesting frequent and prolonged occupation areas. A combined 2091 click trains recorded, with 129 (6.2%) containing minimum inter‐click intervals (ICIs) below 10 ms...

10.1111/1749-4877.12102 article EN Integrative Zoology 2014-06-11

A method is presented to estimate the density of finless porpoises using stationed passive acoustic monitoring. The number click trains detected by stereo data loggers (A-tag) was converted an porpoises. First, automated off-line filter developed detect a train among noise, and detection false-alarm rates were calculated. Second, estimation model proposed. cue-production rate measured biologging experiments. probability detecting cue area size calculated from source level, beam patterns,...

10.1121/1.3442574 article EN The Journal of the Acoustical Society of America 2010-09-01

Abstract A pioneering boat‐based survey was conducted in 2019, to gather baseline information regarding the presence, composition, relative abundance, and spatial distribution of deep‐diving off‐shore cetaceans northern South China Sea (SCS). total 27 sightings comprising at least 8 cetacean species were recorded during 13‐day survey, including 5 (i.e. Risso's dolphin [ Grampus griseus ], short‐finned pilot whale Globicephala macrorhynchus sperm Physeter macrocephalus Cuvier's beaked Ziphius...

10.1111/1749-4877.12508 article EN Integrative Zoology 2020-12-01

Abstract Deraniyagala's beaked whale ( Mesoplodon hotaula ) is one of the least‐known species, with only a few possible live sightings being documented to date. Here, vocalizations whales were recorded using drifting recording systems in confirmed presence this northern South China Sea (SCS) 2021. A total 699 qualified frequency‐modulated (FM) pulses used calculate frequency and duration measurements. FM had median peak 43.3 kHz interpulse interval (IPI) 244.6 ms. Both spectra measurements...

10.1111/mms.13179 article EN Marine Mammal Science 2024-09-04

Abstract Poyang Lake is the largest freshwater lake in China and flows into Yangtze River. It a traditional habitat for endangered finless porpoise, which has not been well investigated. To reveal distribution of porpoise Lake, 12 passive acoustic surveys were conducted along 123 km main channel during different seasons (spring transition season, wet autumn dry season) from 2008 to 2012. We counted number phonating porpoises encountered calculated detection rate (encountered individuals...

10.1111/mms.12181 article EN Marine Mammal Science 2014-11-27

The Indo-Pacific humpback dolphin (Sousa chinensis) is a small inshore species of odontocete cetacean listed as Vulnerable on the IUCN Red List. Here, we report evolution S. chinensis chromosomes from its cetruminant ancestor and elucidate evolutionary history population genetics two neighboring populations. We found that breakpoints in ancestral leading to could have affected function genes related kidney filtration, body development, immunity. Resequencing individuals populations...

10.1016/j.isci.2020.101640 article EN cc-by-nc-nd iScience 2020-10-01

The Yangtze finless porpoise (Neophocaena asiaeorientalis ssp. asiaeorientalis) is a subspecies of the narrow-ridged (N. asiaeorientalis). In total, 714.28 gigabases (Gb) raw reads were generated by whole-genome sequencing porpoise, using an Illumina HiSeq 2000 platform. After filtering low-quality and duplicated reads, we assembled draft genome 2.22 Gb, with contig N50 scaffold values 46.69 kilobases (kb) 1.71 megabases (Mb), respectively. We identified 887.63 Mb repetitive sequences...

10.3390/genes9040213 article EN Genes 2018-04-16

In order to screen the candidate genes of Fenneropenaeus chinensis related low-temperature tolerance, this research takes juvenile prawns F. (P40) in low temperature stress group (4°C) and normal (18°C) as experimental materials. The results showed that a total 127,939 Unigenes with average length 1,190 bp were obtained by assembly, which 46% annotated Nr database. A 1,698 differentially expressed screened differential gene expression analysis, 920 up-regulated 778 down-regulated expression....

10.1371/journal.pone.0211182 article EN cc-by PLoS ONE 2019-04-08

Abstract Beaked whales represent around 25% of known extant cetacean species, yet they are the least all marine mammals. Identification many Mesoplodon species has relied on examination a few stranded individuals. Particularly, ginkgo‐toothed beaked whale ( ginkgodens ) and Deraniyagala's hotaula among least‐known without confirmed sightings living individuals to date. We present sighting 3 free‐ranging M. ginkgodens/hotaula from dedicated mammal vessel survey carried out in South China Sea...

10.1111/1749-4877.12507 article EN Integrative Zoology 2020-12-02

This study presents an eye-safe, single-mode, nanosecond-pulsed, and all-fiber laser source with masteroscillator-power-amplifier configuration at 1 550 nm that is suitable for high-resolution three-dimensional (3D) imaging light detection ranging (LIDAR) system.The output peak power of 7.6 kW obtained the 1.2-ns pulse width 50-kHz repetition rate.The single-mode ensures range precision results LIDAR used as a transmitter 3D detailed characteristics system are presented.

10.3788/col201210.121402 article EN Chinese Optics Letters 2012-01-01

Ship noise pollution has raised considerable concerns among regulatory agencies and cetacean researchers worldwide. There is an urgent need to quantify ship in coastal areas assess its potential biological impacts. In this study, underwater broadband from commercial ships a critical habitat of Indo-Pacific humpback dolphins was recorded analyzed. Data analysis indicated that the caused by investigated with average length 134 ± 81 m, traveling at 18.8 2.5 km/h [mean standard deviation (SD), n...

10.1121/1.5009444 article EN The Journal of the Acoustical Society of America 2017-11-01

In 2014, Indo-Pacific humpback dolphins were recorded for the first time in waters southwest of Hainan Island, China. this paper, temporal occurrence region was detected by stationary passive acoustic monitoring. During 130-day observation period (from January to July 2016), 1969 click trains produced identified, and 262 ten-minute recording bins contained echolocation dolphins, which 70.9% at night 29.1% during day. A diurnal rhythm with a nighttime peak detections found. Passive indicated...

10.1121/1.5011170 article EN The Journal of the Acoustical Society of America 2017-11-01

The Indo-Pacific humpback dolphin (IPHD, Sousa chinensis) is a coastal species inhabiting tropical and warm-temperate waters. presence of this vulnerable was recently discovered in shallow waters southwest Hainan Island, China. influence the acoustic habitat on distribution behavior IPHD investigated using an array passive platforms (n = 6) that spanned more than 100 km coastline during 75-day monitoring period. Its assessed within 19 215 five-min recordings by classifying echolocation...

10.1121/10.0001384 article EN The Journal of the Acoustical Society of America 2020-06-01

Abstract Indo‐Pacific humpback dolphins ( Sousa chinensis ) use whistles to communicate with their conspecifics. Little is known about the acoustic repertoire of in waters southwest Hainan Island, a newly recorded population 2014. In this study, dolphin were collected by using autonomous recorders. The fundamental frequencies and durations ranges 0.71–21.35 kHz 0.06–2.22 s, respectively. Significant intraspecific differences duration frequency found between other geographically neighboring...

10.1111/mms.12816 article EN Marine Mammal Science 2021-05-03
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