Wenke Liu

ORCID: 0000-0003-4433-8735
Publications
Citations
Views
---
Saved
---
About
Contact & Profiles
Research Areas
  • Hydrogen Storage and Materials
  • Fusion materials and technologies
  • Nuclear Materials and Properties
  • Mycorrhizal Fungi and Plant Interactions
  • Soil Carbon and Nitrogen Dynamics
  • Light effects on plants
  • Ultrasound and Cavitation Phenomena
  • RNA modifications and cancer
  • Plant nutrient uptake and metabolism
  • Ferroptosis and cancer prognosis
  • Innovations in Aquaponics and Hydroponics Systems
  • Agriculture, Soil, Plant Science
  • Growth and nutrition in plants
  • Meningioma and schwannoma management
  • Phytase and its Applications
  • MicroRNA in disease regulation
  • Cold Fusion and Nuclear Reactions
  • Phosphorus and nutrient management
  • Plant Physiology and Cultivation Studies
  • Circular RNAs in diseases
  • Parasitic infections in humans and animals
  • Ultrasound and Hyperthermia Applications
  • Impact of Light on Environment and Health
  • Vascular Malformations Diagnosis and Treatment
  • Agricultural Productivity and Crop Improvement

New York University
2020-2022

Institute for Systems Biology
2020-2022

Chinese Academy of Agricultural Sciences
2006-2022

Institute of Environment and Sustainable Development in Agriculture
2006-2022

Shenzhen University
2022

University of Birmingham
2015-2022

Sichuan University
2008-2022

West China Hospital of Sichuan University
2017-2022

Ministry of Agriculture and Rural Affairs
2022

Institute of Process Engineering
2022

Michael A. Gillette Shankha Satpathy Song Cao Saravana M. Dhanasekaran Suhas Vasaikar and 95 more Karsten Krug Francesca Petralia Yize Li Wen-Wei Liang Boris Reva Azra Krek Jiayi Ji Xiaoyu Song Wenke Liu Runyu Hong Lijun Yao Lili M. Blumenberg Sara R. Savage Michael C. Wendl Bo Wen Kai Li Lauren C. Tang Melanie A. MacMullan Shayan C. Avanessian M. Harry Kane Chelsea J. Newton MacIntosh Cornwell Ramani Kothadia Weiping Ma Seungyeul Yoo Rahul Mannan Pankaj Vats Chandan Kumar‐Sinha Emily Kawaler Tatiana Omelchenko Antonio Colaprico Yifat Geffen Yosef E. Maruvka Felipe da Veiga Leprevost Maciej Wiznerowicz Zeynep H. Gümüş Rajwanth Veluswamy Galen Hostetter David I. Heiman Matthew A. Wyczalkowski Tara Hiltke Mehdi Mesri Christopher R. Kinsinger Emily S. Boja Gilbert S. Omenn Arul M. Chinnaiyan Henry Rodriguez Qing Kay Li Scott D. Jewell Mathangi Thiagarajan Gad Getz Bing Zhang David Fenyö Kelly V. Ruggles Marcin Cieślik Ana I. Robles Karl R. Clauser Ramaswamy Govindan Pei Wang Alexey I. Nesvizhskii Li Ding D.R. Mani Steven A. Carr Alex Webster Alicia Francis Alyssa Charamut Amanda G. Paulovich Amy M. Perou Andrew K. Godwin Andrii Karnuta Annette Marrero-Oliveras Barbara Hindenach Barbara L. Pruetz Bartosz Kubisa Brian J. Druker Chet Birger Corbin D. Jones Dana R. Valley Daniel C. Rohrer Daniel Cui Zhou Daniel W. Chan David Chesla David Clark Dmitry Rykunov Donghui Tan Elena V. Ponomareva Elizabeth R. Duffy Eric Burks Eric E. Schadt Erik J. Bergstrom Eugene S. Fedorov Ewa P. Malc George D. Wilson Haiquan Chen Halina Krzystek

To explore the biology of lung adenocarcinoma (LUAD) and identify new therapeutic opportunities, we performed comprehensive proteogenomic characterization 110 tumors 101 matched normal adjacent tissues (NATs) incorporating genomics, epigenomics, deep-scale proteomics, phosphoproteomics, acetylproteomics. Multi-omics clustering revealed four subgroups defined by key driver mutations, country, gender. Proteomic phosphoproteomic data illuminated downstream copy number aberrations, somatic...

10.1016/j.cell.2020.06.013 article EN cc-by-nc-nd Cell 2020-07-01

We undertook a comprehensive proteogenomic characterization of 95 prospectively collected endometrial carcinomas, comprising 83 endometrioid and 12 serous tumors. This analysis revealed possible new consequences perturbations to the p53 Wnt/β-catenin pathways, identified potential role for circRNAs in epithelial-mesenchymal transition, provided information about proteomic markers clinical genomic tumor subgroups, including relationships known druggable pathways. An extensive genome-wide...

10.1016/j.cell.2020.01.026 article EN cc-by Cell 2020-02-01
Shankha Satpathy Karsten Krug Pierre M. Jean Beltran Sara R. Savage Francesca Petralia and 95 more Chandan Kumar‐Sinha Yongchao Dou Boris Reva M. Harry Kane Shayan C. Avanessian Suhas Vasaikar Azra Krek Jonathan T. Lei Eric J. Jaehnig Tatiana Omelchenko Yifat Geffen Erik J. Bergstrom Vasileios Stathias Karen E. Christianson David I. Heiman Marcin Cieślik Song Cao Xiaoyu Song Jiayi Ji Wenke Liu Kai Li Bo Wen Yize Li Zeynep H. Gümüş Myvizhi Esai Selvan Rama Soundararajan Tanvi H. Visal Maria Gabriela Raso Edwin R. Parra Özgün Babur Pankaj Vats Shankara Anand Tobias Schraink MacIntosh Cornwell Fernanda Martins Rodrigues Houxiang Zhu Chia-Kuei Mo Yuping Zhang Felipe da Veiga Leprevost Chen Huang Arul M. Chinnaiyan Matthew A. Wyczalkowski Gilbert S. Omenn Chelsea J. Newton Stephan C. Schürer Kelly V. Ruggles David Fenyö Scott D. Jewell Mathangi Thiagarajan Mehdi Mesri Henry Rodriguez Sendurai A. Mani Namrata D. Udeshi Gad Getz James Suh Qing Kay Li Galen Hostetter Paul K. Paik Saravana M. Dhanasekaran Ramaswamy Govindan Li Ding Ana I. Robles Karl R. Clauser Alexey I. Nesvizhskii Pei Wang Steven A. Carr Bing Zhang D.R. Mani Michael A. Gillette Alexander L. Green Alfredo Molinolo Alicia Francis Amanda G. Paulovich Andrii Karnuta Antonio Colaprico Barbara Hindenach Barbara L. Pruetz Bartosz Kubisa Brian J. Druker Carissa A. Huynh Charles A. Goldthwaite Chet Birger Christopher R. Kinsinger Corbin D. Jones Dan Rohrer Dana R. Valley Daniel W. Chan David Chesla Donna E. Hansel Elena V. Ponomareva Elizabeth R. Duffy Eric Burks Eric E. Schadt Eugene S. Fedorov Eunkyung An

Lung squamous cell carcinoma (LSCC) remains a leading cause of cancer death with few therapeutic options. We characterized the proteogenomic landscape LSCC, providing deeper exposition LSCC biology potential implications. identify NSD3 as an alternative driver in FGFR1-amplified tumors and low-p63 overexpressing target survivin. SOX2 is considered undruggable, but our analyses provide rationale for exploring chromatin modifiers such LSD1 EZH2 to SOX2-overexpressing tumors. Our data support...

10.1016/j.cell.2021.07.016 article EN cc-by-nc-nd Cell 2021-08-01
Yize Li T. Mamie Lih Saravana M. Dhanasekaran Rahul Mannan Lijun Chen and 95 more Marcin Cieślik Yige Wu Rita Jiu-Hsien Lu David Clark Iga Kołodziejczak Runyu Hong Siqi Chen Yanyan Zhao Seema Chugh Wagma Caravan Nataly Naser Al Deen Noshad Hosseini Chelsea J. Newton Karsten Krug Yuanwei Xu Kyung-Cho Cho Yingwei Hu Yuping Zhang Chandan Kumar‐Sinha Weiping Ma Anna Calinawan Matthew A. Wyczalkowski Michael C. Wendl Yuefan Wang Shenghao Guo Cissy Zhang Anne Le Aniket Dagar Alex Hopkins Hanbyul Cho Felipe da Veiga Leprevost Xiaojun Jing Guo Ci Teo Wenke Liu Melissa A. Reimers Russell K. Pachynski Alexander J. Lazar Arul M. Chinnaiyan Brian Andrew Van Tine Bing Zhang Karin Rodland Gad Getz D.R. Mani Pei Wang Feng Chen Galen Hostetter Mathangi Thiagarajan W. Marston Linehan David Fenyö Scott D. Jewell Gilbert S. Omenn Rohit Mehra Maciej Wiznerowicz Ana I. Robles Mehdi Mesri Tara Hiltke Eunkyung An Henry Rodriguez Daniel W. Chan Christopher J. Ricketts Alexey I. Nesvizhskii Hui Zhang Li Ding Alicia Francis Amanda G. Paulovich Andrzej Antczak Anthony R. Green Antonio Colaprico A. Ari Hakimi Barb Pruetz Barbara Hindenach Birendra Kumar Yadav Boris Reva Brenda Fevrier-Sullivan Brian J. Druker Cezary Szczylik Charles A. Goldthwaite Chet Birger Corbin D. Jones Daniel C. Rohrer Darlene Tansil David Chesla David I. Heiman Elizabeth R. Duffy Eri E. Schadt Francesca Petralia Gabriel Bromiński Gabriela Quiroga‐Garza George D. Wilson Ginny Xiaohe Li Grace Zhao Yi Hsiao James J. Hsieh Jan Lubiński Jasmin Bavarva

Clear cell renal carcinomas (ccRCCs) represent ∼75% of RCC cases and account for most RCC-associated deaths. Inter- intratumoral heterogeneity (ITH) results in varying prognosis treatment outcomes. To obtain the comprehensive profile ccRCC, we perform integrative histopathologic, proteogenomic, metabolomic analyses on 305 ccRCC tumor segments 166 paired adjacent normal tissues from 213 cases. Combining histologic molecular profiles reveals ITH 90% ccRCCs, with 50% demonstrating immune...

10.1016/j.ccell.2022.12.001 article EN cc-by-nc-nd Cancer Cell 2022-12-22

When a microbubble is subject to ultrasound, non-spherical oscillation or surface modes can be generated after many acoustic cycles. This phenomenon has wide applications, including ultrasonic cleaning, sonochemistry, and biomedical ultrasonics. Yet, the nonlinear development of bubble shape over dozens cycles not well understood. Here, we describe grid-free robust model simulate phenomenon. A viscous pressure correction introduced compensate non-zero tangential stress at free in potential...

10.1063/5.0077091 article EN Physics of Fluids 2022-01-01

A bubble initiated near a rigid boundary may be almost in contact with the because of its expansion and migration to boundary, where thin layer water forms between thereafter. This phenomenon is modelled using weakly compressible theory coupled integral method. The wall effects are imaging numerical instabilities caused by surface handled removing them joining image boundary. Our computations correlate well experiments for both first second cycles oscillation. time history energy system...

10.1098/rsfs.2015.0048 article EN Interface Focus 2015-08-26

Abstract A glasshouse study was conducted to investigate the symbiotic efficiency and soil adaptability of four AMF using glass-bead cultivation systems. The results showed that fungi varied among three soils. Particularly, BEG167 shifted from positive in Beijing negative Guangdong soil. Furthermore, had high all Intraspecific differences BRG168 BEG221 were found Taking adaptabilty into consideration, it concluded BEG167, BEG168 soil, BEG151 Hubei effective for maize.

10.1080/09064710802063089 article EN Acta Agriculturae Scandinavica Section B - Soil & Plant Science 2008-06-27
Coming Soon ...