Kazuki Saito

ORCID: 0000-0003-4663-1134
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About
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Research Areas
  • Chemical Synthesis and Analysis
  • Monoclonal and Polyclonal Antibodies Research
  • Ubiquitin and proteasome pathways
  • RNA and protein synthesis mechanisms
  • RNA modifications and cancer
  • Neurobiology and Insect Physiology Research
  • Computational Drug Discovery Methods
  • HER2/EGFR in Cancer Research
  • RNA Research and Splicing
  • Synthesis and biological activity
  • Neuropeptides and Animal Physiology
  • Glycosylation and Glycoproteins Research
  • Peptidase Inhibition and Analysis
  • Protein Degradation and Inhibitors
  • Receptor Mechanisms and Signaling
  • Carbohydrate Chemistry and Synthesis
  • Click Chemistry and Applications
  • Diabetes, Cardiovascular Risks, and Lipoproteins
  • Protein Structure and Dynamics
  • Pain Mechanisms and Treatments
  • Healthcare and Venom Research
  • Synthesis of heterocyclic compounds
  • Insect and Pesticide Research
  • Protein Kinase Regulation and GTPase Signaling
  • Advanced Proteomics Techniques and Applications

Nagano Municipal Hospital
2024

Himeji Dokkyo University
2017-2023

Africa Rice Center
2022

Tokyo City University
2021

The University of Tokyo
1987-2017

Tokyo Denki University
2015

Toranomon Hospital
1990-2014

Kyoto Pharmaceutical University
2006-2013

University of Tsukuba
2011-2012

Systems Biology Institute
2009-2011

ErbB tyrosine kinase receptors mediate mitogenic signal cascade by binding a variety of ligands and recruiting the different cassettes adaptor proteins. In present study, we examined heregulin (HRG)-induced transduction ErbB4 receptor found that phosphatidylinositol 3'-kinase (PI3K)-Akt pathway negatively regulated extracellular signal-regulated (ERK) phosphorylating Raf-1 on Ser(259). As time-course kinetics Akt ERK activities seemed to be transient complex, constructed mathematical...

10.1042/bj20021824 article EN Biochemical Journal 2003-07-11

Eukaryotic translation termination is mediated by two interacting release factors, eRF1 and eRF3, which act cooperatively to ensure efficient stop codon recognition fast polypeptide release. The crystal structures of human Schizosaccharomyces pombe full-length in complex with eRF3 lacking the GTPase domain revealed details interaction between these factors marked conformational changes that occur upon binding leading resemble a tRNA molecule. Small-angle X-ray scattering analysis...

10.1101/gad.1770109 article EN Genes & Development 2009-05-01

No-go decay and nonstop are mRNA surveillance pathways that detect translational stalling degrade the underlying mRNA, allowing correct translation of genetic code. In eukaryotes, protein complex Pelota (yeast Dom34) Hbs1 GTPase recognizes stalled ribosome containing defective mRNA. Recently, we found archaeal (aPelota) associates with elongation factor 1α (aEF1α) to act in pathway, which accounts for lack an ortholog archaea. Here present structure aPelota GTP-bound aEF1α determined at...

10.1073/pnas.1009598107 article EN Proceedings of the National Academy of Sciences 2010-09-27

Incidental ribosome stalling during translation elongation is an aberrant phenomenon protein synthesis and subjected to quality control by surveillance systems, in which mRNA a nascent are rapidly degraded. Their detailed molecular mechanisms as well responsible factors for these processes beginning be understood. However, the initial detecting stalled that result degradation remain determined. Among identified date, two E3 ubiquitin ligases have been reported function distinct manners....

10.1371/journal.pgen.1005197 article EN cc-by PLoS Genetics 2015-04-24

The purpose of this study was to quantitatively evaluate paradoxical diaphragmatic motion using magnetic resonance (MR) imaging. A total 27 subjects were examined, including 12 normal young adults, six control individuals, and nine patients with emphysema. With in the supine position, 30 sequential sagittal MR images entire right lung obtained during tidal deep slow breathing. Diaphragmatic movement between estimated as displacement area a respiratory cycle calculated. diaphragm,...

10.1183/09031936.02.00044602 article EN European Respiratory Journal 2002-02-01

Diabet. Med. 29, e279‐e285 (2012) Abstract Aim To evaluate various screening criteria for pre‐diabetes to identify which combination of impaired fasting glucose and elevated HbA 1c values performs most effectively in predicting future diabetes a large cohort Japanese individuals. Methods The study included 4670 men 1571 women without (diabetes: plasma ≥ 7.0 mmol/l, 48 mmol/mol (≥ 6.5%), or self‐reported clinician‐diagnosed diabetes). Pre‐diabetes was diagnosed by (fasting 5.6–6.9 mmol/l...

10.1111/j.1464-5491.2012.03686.x article EN Diabetic Medicine 2012-04-17

The phospholipid metabolism of rat peritoneal mast cells stimulated with mastoparan, a secretagogue purified from wasp venom, was investigated. Mastoparan at 20 caused rapid secretion histamine. induced transient decrease phosphatidylinositol 4,5‐bisphosphate on 32 P labeling and generation water‐soluble degradation product, inositol trisphosphate [ 3 H]inositol labeling, suggesting the activation phospholipase C upon stimulation.

10.1016/0014-5793(85)80403-8 article EN FEBS Letters 1985-09-02

The molecular mechanisms of translation termination and mRNA surveillance in archaea remain unclear. In eukaryotes, eRF3 HBS1, which are homologous to the tRNA carrier GTPase EF1α, respectively bind eRF1 Pelota decipher stop codons or facilitate surveillance. However, genome-wide searches have failed detect any orthologs both GTPases. Here, we report crystal structure aRF1 from an archaeon, Aeropyrum pernix , present strong evidence that authentic archaeal EF1α acts as a for aPelota. binding...

10.1073/pnas.1009599107 article EN Proceedings of the National Academy of Sciences 2010-10-25

Batesian mimicry protects animals from predators through resemblance with distasteful models in shape, color pattern, or behavior. To elucidate the wing coloration mechanisms involved mimicry, we investigated chemical composition and gene expression of pale yellow red pigments a swallowtail butterfly, Papilio polytes, whose females mimic unpalatable butterfly Pachliopta aristolochiae. Using LC/MS, showed that regions non-mimetic consist kynurenine N-β-alanyldopamine (NBAD). Moreover, qRT-PCR...

10.1038/srep03184 article EN cc-by-nc-nd Scientific Reports 2013-11-11

The extracellular domain of human EGF receptor (sEGFR) produced by CHO cells has been used in various biophysical studies to elucidate the molecular mechanism EGF-induced activation. We have found that sEGFR contains one oligosac-charide chain attached an atypical N-glycosylation consensus sequence, Asn32 -X33 -Cys34. oligosaccharide structure at is a mixture monosialo and asialo forms core fucosylated biantennary complex-type oligosaccharide. Deletion this glycosylation site replacement...

10.1093/oxfordjournals.jbchem.a022585 article EN The Journal of Biochemistry 2000-01-01

In the postgenomic era, many researchers and organizations have been engaged in structural functional analyses of proteins. As a part these efforts, searching for small organic compounds that bind specifically to target proteins is quite important. this study, we developed rational strategy ligand discovery based on three-dimensional structures proteins, which were elucidated by X-ray crystallography nuclear magnetic resonance spectroscopy. The has three features: (i) rapid selection...

10.1002/pmic.200401032 article EN PROTEOMICS 2005-03-30

When a stop codon appears at the ribosomal A site, class I and II release factors (RFs) terminate translation. In eukaryotes archaea, RFs form heterodimeric complex, complete overall translation termination process in GTP-dependent manner. However, structural mechanism of by RF complex remains unresolved. archaeal elongation factor 1 alpha (aEF1α), carrier GTPase for tRNA, acts as forming with RF1 (aRF1). We report crystal structure aRF1·aEF1α first active complex. This remarkably resembles...

10.1093/nar/gks660 article EN cc-by-nc Nucleic Acids Research 2012-07-05
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