- Aquatic life and conservation
- Marine animal studies overview
- Aquaculture disease management and microbiota
- Gene expression and cancer classification
- Molecular Biology Techniques and Applications
- Amphibian and Reptile Biology
- Immune Cell Function and Interaction
- HIV Research and Treatment
- Genetic diversity and population structure
- T-cell and B-cell Immunology
- Bioinformatics and Genomic Networks
- Animal Behavior and Reproduction
- MicroRNA in disease regulation
- Identification and Quantification in Food
University of Oregon
2024-2025
Ragon Institute of MGH, MIT and Harvard
2012
Systems Analytics (United States)
2010
Batch effects are the systematic non-biological differences between batches (groups) of samples in microarray experiments due to various causes such as sample preparation and hybridization protocols. Previous work focused mainly on development methods for effective batch removal. However, their impact cross-batch prediction performance, which is one most important goals microarray-based applications, has not been addressed. This paper uses a broad selection data sets from Microarray Quality...
Seahorses, pipefishes, and seadragons are fishes from the family Syngnathidae that have evolved extraordinary traits including male pregnancy, elongated snouts, loss of teeth, dermal bony armor. The developmental genetic cellular changes led to evolution these largely unknown. Recent syngnathid genome assemblies revealed suggestive gene content differences provided opportunity for detailed analyses. We created a single-cell RNA sequencing atlas Gulf pipefish embryos understand basis four...
Seahorses, pipefishes, and seadragons are fishes from the family Syngnathidae that have evolved extraordinary traits including male pregnancy, elongated snouts, loss of teeth, dermal bony armor. The developmental genetic cellular changes led to evolution these largely unknown. Recent syngnathid genomes revealed suggestive gene content differences provide opportunity for detailed analyses. We created a single cell RNA sequencing atlas Gulf pipefish embryos understand basis four traits:...
Seahorses, pipefishes, and seadragons are fishes from the family Syngnathidae that have evolved extraordinary traits including male pregnancy, elongated snouts, loss of teeth, dermal bony armor. The developmental genetic cellular changes led to evolution these largely unknown. Recent syngnathid genome assemblies revealed suggestive gene content differences provide opportunity for detailed analyses. We created a single cell RNA sequencing atlas Gulf pipefish embryos understand basis four...
Seahorses, pipefishes, and seadragons are fishes from the family Syngnathidae that have evolved extraordinary traits including male pregnancy, elongated snouts, loss of teeth, dermal bony armor. The developmental genetic cellular changes led to evolution these largely unknown. Recent syngnathid genome assemblies revealed suggestive gene content differences provide opportunity for detailed analyses. We created a single cell RNA sequencing atlas Gulf pipefish embryos understand basis four...
Batch effects are the systematic non-biological differences between batches (groups) of samples in microarray experiments due to various causes such as sample preparation and hybridization protocols. Previous work focused mainly on development methods for effective batch removal. However, their impact cross-batch prediction performance, which is one most important goals microarray-based applications, has not been addressed. This paper uses a broad selection data sets from Microarray Quality...
Seahorses, pipefishes, and seadragons are fishes from the family Syngnathidae that have evolved extraordinary traits including male pregnancy, elongated snouts, loss of teeth, dermal bony armor. The developmental genetic cellular changes led to evolution these largely unknown. Recent syngnathid genome assemblies revealed suggestive gene content differences provide opportunity for detailed analyses. We created a single cell RNA sequencing atlas Gulf pipefish embryos understand basis four...
Methods To accomplish this, we performed whole genome transcriptional profiling on sorted epitope-specific CD8 T cells, in the presence and absence of cognate peptide, from a total 8 B*2705 elite controllers progressors. Epitope-specific CTLs were isolated using HLA class I tetramers used to prepare mRNA for evaluation by gene expression profiles Illumina bead arrays. Bulk cells as an internal control each patient.