Yi Shen

ORCID: 0000-0001-5043-5211
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About
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Research Areas
  • Legume Nitrogen Fixing Symbiosis
  • Peanut Plant Research Studies
  • Coconut Research and Applications
  • Agronomic Practices and Intercropping Systems
  • Genetic Mapping and Diversity in Plants and Animals
  • Chromosomal and Genetic Variations
  • Plant nutrient uptake and metabolism
  • Ruminant Nutrition and Digestive Physiology
  • Cancer, Lipids, and Metabolism
  • Plant Parasitism and Resistance
  • Nitrogen and Sulfur Effects on Brassica
  • MicroRNA in disease regulation
  • Plant Molecular Biology Research
  • Soil Carbon and Nitrogen Dynamics
  • Rice Cultivation and Yield Improvement
  • Ferroptosis and cancer prognosis
  • Cassava research and cyanide
  • Plant responses to water stress
  • Sodium Intake and Health
  • Heat shock proteins research
  • Enzyme Production and Characterization
  • Soil Geostatistics and Mapping
  • Clay minerals and soil interactions
  • Agroforestry and silvopastoral systems
  • Synthetic Aperture Radar (SAR) Applications and Techniques

Jiangsu Academy of Agricultural Sciences
2015-2025

Lishui University
2024

Hangzhou Normal University
2024

Tongji University
2018-2023

Shanghai Chest Hospital
2022

Shanghai Jiao Tong University
2022

Tongji Hospital
2018-2021

University of Nevada, Reno
2020

Nanjing Agricultural University
2009-2014

Abstract Background Stress-induced hormones are essential for plants to modulate their microbiota and dynamically adjust the environment. Despite emphasis of role phytohormone ethylene in plant physiological response heterospecific neighbour detection, less is known about how this activated signal mediates focal rhizosphere enhance fitness. Here, using 3 years peanut ( Arachis hypogaea L.), a legume, cyanide-containing cassava Manihot esculenta Crantz) intercropping monocropping field, pot...

10.1186/s40168-019-0775-6 article EN cc-by Microbiome 2020-01-18

The cultivated peanut is an important oil and cash crop grown worldwide. To meet the growing demand for production each year, genetic studies enhanced selection efficiency are essential, including linkage mapping, genome-wide association study, bulked-segregant analysis marker-assisted selection. Specific locus amplified fragment sequencing (SLAF-seq) a powerful tool high density map (HDGM) construction quantitative trait loci (QTLs) mapping. In this HDGM was constructed using SLAF-seq...

10.1186/s12870-019-2164-5 article EN cc-by BMC Plant Biology 2019-12-01

The cultivated peanut, A. hypogaea L., is an important oil and food crop globally.High-density genetic linkage mapping a valuable effective method for exploring complex quantitative traits. In this context, recombinant inbred line (RIL) of 146 lines was developed by crossing Huayu28 P76. We 433,679 high-quality SLAFs, which 29,075 were polymorphic. 4,817 SLAFs encoded grouped into different segregation patterns. A high-resolution map containing 2,334 markers (68 SSRs 2,266 SNPs) on 20 groups...

10.1038/s41598-018-23873-7 article EN cc-by Scientific Reports 2018-03-29

Genomic imprinting is an epigenetic phenomenon by which certain genes display differential expression in a parent-of-origin-dependent manner. Hundreds of imprinted have been identified from several plant species. Here, we identified, with high level confidence, 208 gene candidates rice (Oryza sativa). Imprinted showed limited association the transposable elements, contrasts findings Arabidopsis (Arabidopsis thaliana). Generally, conserved within species, but intraspecific variation also was...

10.1104/pp.17.01621 article EN PLANT PHYSIOLOGY 2018-06-18

Plants have evolved the capability to respond interspecific neighbors by changing morphological performance and reshaping belowground microbiota. However, whether neighboring plants influence microbial colonization of host's root further affect host is less understood. In this study, using 16S rRNA high-throughput sequencing peanut (Arachis hypogaea L.) roots from over 5 years mono- intercropping field systems, we found that neighbor maize can alter composition re-shape community assembly....

10.3389/fpls.2022.830666 article EN cc-by Frontiers in Plant Science 2022-03-03

This study on soil salinity inversion in coastal tidal flats based Sentinel-2 remote sensing imagery is significant for improving saline–alkali soils and advancing flat agriculture. proposes an improved approach using a new enhanced chaotic mapping adaptive whale optimization neural network (CIWOABP) algorithm. Novel spectral indices were developed to enhance correlations with salinity, significantly outperforming traditional indexes. The CIWOABP model achieved superior validation accuracy...

10.3390/agriculture15030323 article EN cc-by Agriculture 2025-02-01

Background Sepsis-induced cardiomyopathy ( SIC ) is one major cause of death for sepsis but lacks timely diagnosis and specific treatment due to unclear mechanisms. Lipocalin-2 (LCN-2) a key regulator lipid metabolism which has been recently proved closely related sepsis, however, the relationship between LCN-2 septic myocardial injury remains unknown. We aim explore role in pathological progress based on clinical laboratory evidence. Methods Consecutive patients admitted intensive care unit...

10.3389/fcvm.2022.1009726 article EN cc-by Frontiers in Cardiovascular Medicine 2022-11-07

The mevalonate (MVA) pathway serves an important role in ventricular remodeling. Targeting the MVA has protective effects against myocardial fibrosis. present study aimed to investigate mechanism behind these effects. Primary cultured cardiac fibroblasts from C57BL/6 mice were treated <em>in vitro</em> 5 groups: i) negative control; ii) angiotensin II (Ang II) model (1x10‑5 mol/l); iii) Ang + rosuvastatin (ROS); iv) alendronate (ALE); and v) fasudil (FAS). Collagen crystal violet staining...

10.3892/etm.2021.9655 article EN Experimental and Therapeutic Medicine 2021-01-18

Grain weight and grain shape are important traits that determine rice yield quality. Mining more quantitative trait loci (QTLs) control will help to further improve the molecular regulatory network of development provide gene resources for high-yield high-quality varieties. In present study, a QTL length (GL) width (GW),

10.3390/plants13172521 article EN cc-by Plants 2024-09-08

Biochar, a carbon-rich material that has attracted considerable interest in interdisciplinary research, is produced through process known as pyrolysis, which involves the thermal decomposition of organic absence oxygen. Bamboo biochar specific type biochar, manufactured from bamboo straw carbonisation at 800 °C and subsequent filtration 100-mesh sieve. There currently lack research into potential benefits improving soil quality tea gardens. The aim this study was to investigate effect on...

10.7717/peerj.18642 article EN cc-by PeerJ 2024-12-05

Peanut is one of the most important oilseed crops in world that provides a significant amount lipids and protein for many people. The gynophore plays an role development after fertilization peanut ovule. MicroRNAs (miRNAs) play numerous developmental physiological plant processes. Therefore, it essential to analyze miRNA sequences at different stages explore validate gene function. Multiple small RNAs were sequenced collected from A1, A2, A3 (5, 10, 20 days development, respectively) further...

10.4238/gmr15048691 article EN Genetics and Molecular Research 2016-01-01

An accurate and timely design of individual processes in drill blast tunneling is essential for robust low-risk construction rock tunnels. Conventional dynamic method tunnel focuses on the modification preliminary schemes using exposed on-site data. A novel conceptual model, just-in-time (JIT) tunnel, proposed this study to denote intrinsic requirement that support parameters should be determined a JIT way when mass are excavated. Specifically, implementation can divided into three steps,...

10.2139/ssrn.4379751 article EN 2023-01-01

Abstract Genomic imprinting is an epigenetic phenomenon by which certain genes display monoallelic expression in a parent-of-origin-dependent manner. Hundreds of imprinted have been identified from several plant species. Here we identified, with high level confidence, 208 candidates rice. Imprinted rice showed limited association to the transposable elements, contrast findings Arabidopsis . Generally, conserved within species, but intraspecific variations were confirmed here. Imprinting...

10.1101/143214 preprint EN cc-by bioRxiv (Cold Spring Harbor Laboratory) 2017-05-28

Abstract Background and Aims Intercropping is a widely used agricultural practice to maintain agri-ecosystem function in intensive farmland. However, traditional combinations of tall short plants intercropping systems often sacrifice the health productivity crops due planting orientations. Understanding how orientation-driven light intensity vertically allocate photosynthesized carbon manipulate rhizosphere microbiota would benefit for optimization aboveground design make use belowground...

10.21203/rs.3.rs-2538293/v1 preprint EN cc-by Research Square (Research Square) 2023-02-14

Considering the impact on thermal stress and property degeneration, it is essential to provide accurately temperature distribution of lining under fire scenario in thermal-mechanical investigation tunnel structure which relies consistency between simulation actual results. However, precision most simulated field hampered by ‘temperature platform’ occurs around vaporization point water. To this end, a Condition Fitting Method (CFM) proposed paper, where optimal parameters are adjusted...

10.2139/ssrn.4412940 preprint EN 2023-01-01

To investigate the potential role of phytochrome (PHY) in peanut growth and its response to environmental fluctuations, eight candidate AhPHY genes were identified via genome-wide analysis cultivated peanut. These polypeptides determined possess acidic hydrophilic physiochemical properties exhibit subcellular localization patterns consistent with residence nucleus cytoplasm. Phylogenetic revealed that gene family members classified into three subgroups homologous PHYA/B/E progenitors...

10.3390/genes14071478 article EN Genes 2023-07-20
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