Raimund Nagel

ORCID: 0000-0002-3878-7123
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About
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Research Areas
  • Plant biochemistry and biosynthesis
  • Insect-Plant Interactions and Control
  • Photosynthetic Processes and Mechanisms
  • Microbial Natural Products and Biosynthesis
  • Plant Gene Expression Analysis
  • Plant-Microbe Interactions and Immunity
  • Legume Nitrogen Fixing Symbiosis
  • Mycorrhizal Fungi and Plant Interactions
  • Forest Insect Ecology and Management
  • Plant Molecular Biology Research
  • Antioxidant Activity and Oxidative Stress
  • Plant Pathogenic Bacteria Studies
  • Allelopathy and phytotoxic interactions
  • Plant and animal studies
  • Microbial Metabolic Engineering and Bioproduction
  • Algal biology and biofuel production
  • Plant Parasitism and Resistance
  • Plant Reproductive Biology
  • Turfgrass Adaptation and Management
  • Biochemical and biochemical processes
  • Fungal Biology and Applications
  • Marine and coastal ecosystems
  • ATP Synthase and ATPases Research
  • Saffron Plant Research Studies
  • Enzyme Structure and Function

Leipzig University
2019-2025

Iowa State University
2016-2023

Max Planck Institute for Chemical Ecology
2013-2022

Universidade Federal do Pará
2019

Texas Tech University
2019

Max Planck Society
2011-2013

SUMMARY The unicellular soil alga Chlamydomonas reinhardtii forms diploid zygotes during its sexual cycle. process of a zygote maturing into highly resistant zygospore remains poorly understood despite importance for survival under adverse environmental conditions. Here we describe the detailed timeline morphological and physiological changes maturation in darkness on ammonium‐free Tris‐acetate‐phosphate agar plates. formation multilayered cell wall is primarily responsible increase size...

10.1111/tpj.17238 article EN cc-by-nc-nd The Plant Journal 2025-02-01

Significance Whether insect sesquiterpenes are synthesized de novo, derived from plant precursors, or produced by symbionts is often unknown. We identified an evolutionarily novel terpene synthase gene family in the striped flea beetle, a notorious pest of Brassica crops North America and Asia, one these genes was shown to be directly involved biosynthesis male-specific sesquiterpene aggregation pheromone. Phylogenetic structure analyses indicate that expansion trans -isoprenyl diphosphate...

10.1073/pnas.1523468113 article EN Proceedings of the National Academy of Sciences 2016-03-02

Isoprenyl diphosphate synthases (IDSs) produce the ubiquitous branched-chain diphosphates of different lengths that are precursors all major classes terpenes. Typically, individual short-chain IDSs (scIDSs) make C 10 , 15 and 20 isoprenyl separately. Here, we report product length synthesized by a single scIDS shifts depending on divalent metal cofactor present. This previously undescribed mechanism carbon chain-length determination was discovered for from juvenile horseradish leaf beetles,...

10.1073/pnas.1221489110 article EN Proceedings of the National Academy of Sciences 2013-02-25

Norway spruce (Picea abies) defends itself against herbivores and pathogens by formation of traumatic resin ducts filled with terpenoid-based oleoresin. An important group enzymes in terpenoid biosynthesis are the short-chain isoprenyl diphosphate synthases which produce geranyl (C(10)), farnesyl (C(15)), geranylgeranyl (C(20)) as precursors monoterpenes, sesquiterpenes, diterpene acids, respectively. After treatment methyl jasmonate (MJ) we investigated expression all synthase genes...

10.1007/s11103-011-9832-7 article EN cc-by-nc Plant Molecular Biology 2011-10-14

Isoprenyl diphosphate synthases (IDSs) catalyze some of the most basic steps in terpene biosynthesis by producing prenyl precursors each various terpenoid classes. Most plants investigated have distinct enzymes that produce short-chain all-trans (E) diphosphates geranyl (GDP, C10 ), farnesyl (FDP, C15 ) or geranylgeranyl (GGDP, C20 ). In genome Arabidopsis thaliana, 15 trans-product-forming IDSs are present. Ten these recently been shown to GGDP genetic complementation a carotenoid pathway...

10.1111/tpj.13064 article EN The Plant Journal 2015-10-27

Abstract Spruce (Picea spp.) and other conifers employ terpenoid-based oleoresin as part of their defense against herbivores pathogens. The short-chain isoprenyl diphosphate synthases (IDS) are situated at critical branch points in terpene biosynthesis, producing the precursors different terpenoid classes. To determine role IDS to create altered phenotypes for assessing defensive terpenoids, we overexpressed a bifunctional spruce IDS, geranyl geranylgeranyl synthase white glauca) saplings....

10.1104/pp.113.228940 article EN cc-by PLANT PHYSIOLOGY 2013-12-17

Summary Phytopathogens have developed elaborate mechanisms to attenuate the defense response of their host plants, including convergent evolution complex pathways for production GA phytohormones, which were actually first isolated from rice fungal pathogen Gibberella fujikuroi . The bacterial Xanthomonas oryzae pv. oryzicola (Xoc) has been demonstrated contain a biosynthetic operon with cyclases capable producing universal precursor ent ‐kaurene. Genetic (knock‐out) studies indicate that...

10.1111/nph.14441 article EN New Phytologist 2017-01-30

The ability of plant-associated microbes to produce gibberellin A (GA) phytohormones was first described for the fungal rice pathogen Gibberella fujikuroi in 1930s. Recently capacity GAs shown several bacteria, including symbiotic alpha-proteobacteria (-rhizobia) and gamma-proteobacteria phytopathogens. All necessary enzymes GA production are encoded by a conserved operon, which appears have undergone horizontal transfer between within these two phylogenetic classes bacteria. Here operon be...

10.3389/fmicb.2018.02916 article EN cc-by Frontiers in Microbiology 2018-11-27

Certain plant-associated microbes can produce gibberellin (GA) phytohormones, as first described for the rice fungal pathogen Gibberella fujikuroi and, more recently, bacteria, including several rhizobia and bacterial Xanthomonas oryzae pv. oryzicola. The relevant enzymes are encoded by a biosynthetic operon that exhibits both greater phylogenetic range scattered distribution among bacteria. Here, of this was investigated. To demonstrate conserved functionality, disparate from X. translucens...

10.1094/mpmi-01-17-0001-r article EN other-oa Molecular Plant-Microbe Interactions 2017-03-08

Terpenoids form the largest class of plant metabolites involved in primary and secondary metabolism. Isoprenyl diphosphate synthases (IDSs) catalyze condensation C(5) terpenoid building blocks, isopentenyl dimethylallyl diphosphate, to geranyl (C(10)), farnesyl (C(15)), geranylgeranyl (C(20)). These branch point reactions control flow that act as precursors each major terpene classes-monoterpenes, sequiterpenes, diterpenes, respectively. Thus accurate easily performed assays IDS enzyme...

10.1016/j.ab.2011.12.037 article EN cc-by-nc-nd Analytical Biochemistry 2012-01-04

10.1007/bf01954420 article DE Naunyn-Schmiedeberg s Archives of Pharmacology 1933-12-01

In response to insect herbivory, poplar releases a blend of volatiles that plays important roles in plant defense. Although the volatile bouquet is highly complex and comprises several classes compounds, it dominated by mono- sesquiterpenes. The most common precursors for sesquiterpenes, geranyl diphosphate (GPP) (E,E)-farnesyl (FPP), respectively, are general produced homodimeric or heterodimeric trans-isopentenyl synthases (trans-IDSs) belong family prenyltransferases. To understand...

10.3390/molecules24132408 article EN cc-by Molecules 2019-06-29

Biosynthesis of the gibberellin (GA) plant hormones evolved independently in plants and microbes, but pathways proceed by similar transformations. The combined demethylation γ-lactone ring forming transformation is significant mechanistic interest, yet remains unclear. relevant CYP112 from bacteria was probed activity assays 18 O2 -labeling experiments. Notably, ability tert-butyl hydroperoxide to drive this indicates use ferryl-oxo (Compound I) CYP catalytic cycle for reaction. Together...

10.1002/anie.201713403 article EN publisher-specific-oa Angewandte Chemie International Edition 2018-03-08

Terpenes and phenolics are important constitutive inducible conifer defenses against bark beetles their associated fungi. In this study, the of mature Norway spruce (Picea abies) trees with different histories attack by beetle, Ips typographus were tested inoculation I. typographus-associated fungus Endoconidiophora polonica. We compared that had been under previous those current no record attack. After fungal inoculation, concentrations mono-, sesqui-, diterpenes in increased 3- to 9-fold....

10.3389/fpls.2022.892907 article EN cc-by Frontiers in Plant Science 2022-05-06

Gibberellin (GA) phytohormones are ubiquitous regulators of growth and developmental processes in vascular plants. The convergent evolution GA production by plant-associated bacteria, including both symbiotic nitrogen-fixing rhizobia phytopathogens, suggests that manipulation signaling is a powerful mechanism for microbes to gain an advantage these interactions. Although orthologous operons encode biosynthetic enzymes notable genetic heterogeneity scattered operon distribution lineages, loss...

10.1128/msphere.00292-20 article EN cc-by mSphere 2020-06-02

SUMMARY Regulation of gene expression in eukaryotes is controlled by cis ‐regulatory modules (CRMs). A major class CRMs are enhancers which composed activating elements (CREs) responsible for upregulating transcription. To date, most and CREs have been studied angiosperms; contrast, our knowledge about these key regulators green algae limited. In this study, we aimed at characterizing putative CREs/CRMs from the histone genes unicellular model alga Chlamydomonas reinhardtii . test activity...

10.1111/tpj.16781 article EN cc-by-nc-nd The Plant Journal 2024-05-01

Parallel mechanisms between independently evolved plant and bacterial<italic>ent</italic>-kaurene oxidases.

10.1039/c7ob01819c article EN Organic & Biomolecular Chemistry 2017-01-01

As an alternative to chemical building blocks derived from algal biomass, the excretion of glycolate has been proposed. This process observed in green algae such as Chlamydomonas reinhardtii a product photorespiratory pathway. Photorespiration generally occurs at low CO2 and high O2 concentrations, through key enzyme RubisCO initiating pathway via oxygenation 1.5-ribulose-bisphosphate. In wild-type strains, photorespiration is usually suppressed favour carboxylation due cellular carbon...

10.1007/s00253-022-11933-y article EN cc-by Applied Microbiology and Biotechnology 2022-05-01

Isoprenyl chains are found in many important metabolites. These derived from precursors of the appropriate length produced by isoprenyl diphosphate synthases (IDSs). The human pathogen Mycobacterium tuberculosis makes various isoprenoids/terpenoids, with roles their biosynthesis played two closely related IDSs, encoded grcC1 (Rv0562) and grcC2 (Rv0989c), Rv0989c generating 10-carbon precursor (E)-geranyl (GPP), Rv0562 20-carbon (E,E,E)-geranylgeranyl (GGPP). Intriguingly, while contains...

10.3390/molecules23102546 article EN cc-by Molecules 2018-10-06
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