Yue Tan

ORCID: 0000-0002-9675-8793
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About
Contact & Profiles
Research Areas
  • Cocoa and Sweet Potato Agronomy
  • Phytoplasmas and Hemiptera pathogens
  • Plant Pathogenic Bacteria Studies
  • Insect symbiosis and bacterial influences
  • Plant biochemistry and biosynthesis
  • Microbial Natural Products and Biosynthesis
  • Genomics and Phylogenetic Studies
  • Plant Pathogens and Fungal Diseases
  • Plant Gene Expression Analysis
  • Fungal Biology and Applications
  • Horticultural and Viticultural Research
  • Gut microbiota and health
  • Plant tissue culture and regeneration
  • Microtubule and mitosis dynamics
  • Growth and nutrition in plants
  • Tryptophan and brain disorders
  • Plant Reproductive Biology
  • Analytical Chemistry and Chromatography
  • Metabolomics and Mass Spectrometry Studies
  • Chemical synthesis and alkaloids
  • Plant Disease Management Techniques
  • Diet and metabolism studies
  • Genomics and Chromatin Dynamics
  • Cancer-related Molecular Pathways
  • RNA modifications and cancer

Chinese Academy of Medical Sciences & Peking Union Medical College
2021-2024

Institute of Pomology
2015-2024

Innovation Team (China)
2023

Shandong Academy of Agricultural Sciences
2019-2022

Institute of Molecular and Cell Biology
2012

Agency for Science, Technology and Research
2012

Abstract Sweet cherry ( Prunus avium ) is an economically significant fruit species in the genus . However, contrast to other important trees this genus, only one draft genome assembly available for sweet cherry, which was assembled using Illumina short-read sequences. The incompleteness and low quality of current limit its use genetic genomic studies. A high-quality chromosome-scale reference therefore needed. total 65.05 Gb Oxford Nanopore long reads 46.24 short were generated,...

10.1038/s41438-020-00343-8 article EN cc-by Horticulture Research 2020-08-01

Color is an essential appearance characteristic of sweet cherry (Prunus avium L.) fruits and mainly determined by anthocyanin. Temperature plays important role in the regulation anthocyanin accumulation. In this research, anthocyanin, sugar, plant hormone related gene expression were analyzed using physiological transcriptomic methods order to reveal effects high temperature on fruit coloring mechanism. The results showed that severely inhibited accumulation peel slowed process. total...

10.3389/fpls.2023.1079292 article EN cc-by Frontiers in Plant Science 2023-02-13

Phytoplasmas are cell wall-less bacteria that induce abnormal plant growth and various diseases, causing severe economic loss. highly dependent on nutrients imported from host cells because they have lost many genes involved in essential metabolic pathways during reductive evolution. However, crosstalk between phytoplasmas plants the mechanisms of phytoplasma nutrient acquisition remain poorly understood. In this study, using metabolomics approach, sweet cherry virescence (SCV)...

10.1371/journal.pone.0246203 article EN public-domain PLoS ONE 2021-02-04

Endophytic fungi from desert plants belong to a unique microbial community that has been scarcely investigated chemically and could be new resource for bioactive natural products. In this study, 13 secondary metabolites (1-13) with diverse carbon skeletons, including novel polyketide (1) 5,6-dihydro-4H,7H-2,6-methanopyrano[4,3-d][1,3]dioxocin-7-one ring system three undescribed polyketides (2, 7, 11), were obtained the endophytic fungus Neocamarosporium betae isolated two plant species....

10.3389/fpls.2023.1142212 article EN cc-by Frontiers in Plant Science 2023-03-17

Cartilaginous fishes are the most ancient group of living jawed vertebrates (gnathostomes) and are, therefore, an important reference for understanding evolution vertebrates. The elephant shark (Callorhinchus milii), a holocephalan cartilaginous fish, has been identified as model fish genome because its compact (∼910 Mb) project initiated to obtain whole sequence. In this study, we have generated sequenced full-length enriched cDNA libraries using ‘oligo-capping’ method Sanger sequencing. A...

10.1371/journal.pone.0047174 article EN cc-by PLoS ONE 2012-10-08

Vaccinium duclouxii is an endemic species in China, which distributed Sichuan and Yunnan province of China. The chloroplast (cp) genome V. 168,953 bp size containing 123 unique genes, including 8 rRNA 38 tRNA 77 protein-coding genes (PCGs). Phylogenetic analysis exhibited that macrocarpon were most related to Arbutus unedo.

10.1080/23802359.2019.1624644 article EN cc-by Mitochondrial DNA Part B 2019-07-03

Abstract Sweet cherry ( Prunus avium ) in China has recently been affected by a destructive disease that is characterised symptoms of floral virescence and witches'‐broom growths. The etiological agent the subgroup 16SrV‐B phytoplasma closely related to ‘ Candidatus Phytoplasma ziziphi.’ A previous study revealed photosynthetic activity had significantly declined symptomatic leaves diseased sweet trees. For deeper view into infection, we performed comparative transcriptomic analysis. total...

10.1111/aab.12511 article EN Annals of Applied Biology 2019-06-17

Asterric acid and its analogs belong to diphenyl ethers (DPEs) with multiple substitutions on A/B aromatic rings. This member of DPEs originates from the polyketide pathway displays a wide range biological effects. Though structures asterric are not complex, there were only more than 50 found in nature 1960 2023. In this review, structures, bioactivities, biosynthesis summarized. More importantly, empirical rule about shielding effect B-ring H-6 is suggested, provides convenient useful way...

10.1021/acs.jafc.3c06690 article EN Journal of Agricultural and Food Chemistry 2024-02-22

Phytoplasmas are minute phytopathogenic bacteria that induce excessive vegetative growth, known as witches'-broom (WB), in many infected plant species during the later stages of infection. The WB structure is characterized by densely clustered little (small) leaves, which frequently accompanied chlorosis (yellowing). mechanisms behind formation leaves within structures (LL-WB) poorly understood. To address this gap, LL-WB was extensively studied using sweet cherry virescence (SCV)...

10.1094/pdis-04-24-0862-re article EN Plant Disease 2024-09-18
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