Yanru Ren

ORCID: 0000-0003-1345-4020
Publications
Citations
Views
---
Saved
---
About
Contact & Profiles
Research Areas
  • Genomics and Phylogenetic Studies
  • Chromosomal and Genetic Variations
  • RNA and protein synthesis mechanisms
  • Cancer Genomics and Diagnostics
  • Genetic Mapping and Diversity in Plants and Animals
  • RNA modifications and cancer
  • Machine Learning in Bioinformatics
  • Genomic variations and chromosomal abnormalities
  • Genomics and Rare Diseases
  • Genetic and phenotypic traits in livestock
  • RNA regulation and disease
  • Plant Molecular Biology Research
  • Cancer-related molecular mechanisms research
  • Glioma Diagnosis and Treatment
  • Genomics and Chromatin Dynamics
  • Animal Genetics and Reproduction
  • Photosynthetic Processes and Mechanisms
  • Lung Cancer Treatments and Mutations
  • Ubiquitin and proteasome pathways
  • Epigenetics and DNA Methylation
  • Plant tissue culture and regeneration
  • Lipid metabolism and biosynthesis

Shandong Agricultural University
2025

Wuhan University
2020

Baylor College of Medicine
2004-2011

Baylor Genetics
2011

Texas Biomedical Research Institute
2007

University of Washington
2007

Washington University in St. Louis
2007

Roger E. McLendon Allan H. Friedman D D Bigner Erwin G. Van Meir Daniel J. Brat and 95 more Gena M. Mastrogianakis Jeffrey J. Olson Tom Mikkelsen Norman L. Lehman Ken Aldape W.K. Alfred Yung Oliver Bögler John N. Weinstein Scott Vandenberg Mitchel S. Berger Michael D. Prados Donna M. Muzny Margaret Morgan Stephen W. Scherer Aniko Sabo Lynn Nazareth Lora Lewis Otis Hall Yiming Zhu Yanru Ren Omar Alvi Jiqiang Yao Alicia Hawes Shalini N. Jhangiani Gerald Fowler Anthony San Lucas Christie Kovar Andrew Cree Huyen Dinh Jireh Santibanez Vandita Joshi Manuel L. Gonzalez‐Garay Christopher A. Miller Aleksandar Milosavljevic L A Donehower David A. Wheeler Richard A. Gibbs Kristian Cibulskis Carrie Sougnez Tim Fennell Scott Mahan Jane Wilkinson Liuda Ziaugra Robert C. Onofrio Toby Bloom Robert Nicol Kristin Ardlie Jennifer N. Baldwin Stacey Gabriel Eric S. Lander Jun Li Robert S. Fulton Michael D. McLellan John Wallis David E. Larson Xiaoqi Shi Rachel M. Abbott Lucinda Fulton Ken Chen Daniel C. Koboldt Michael C. Wendl Rick Meyer Yuzhu Tang Ling Lin John R. Osborne Brian H. Dunford-Shore Tracie L. Miner Kim D. Delehaunty Chris Markovic G.M. Swift William Courtney Craig Pohl Scott Abbott Amy Hawkins Shin Leong Carrie A. Haipek Heather K. Schmidt Maddy Wiechert Tammi L. Vickery S. P. Scott David J. Dooling Asif Chinwalla George M. Weinstock Elaine R. Mardis Richard K. Wilson Gad Getz Wendy Winckler Roel G.W. Verhaak Michael S. Lawrence Michael O’Kelly Jim Robinson Gabriele Alexe Rameen Beroukhim Scott L. Carter Derek Y. Chiang

10.1038/nature07385 article EN Nature 2008-09-04

10.1038/nature09298 article EN Nature 2010-08-31

10.1038/nature07423 article EN Nature 2008-10-01
Richard A. Gibbs George M. Weinstock Michael L. Metzker Donna M. Muzny Erica Sodergren and 95 more Steven E. Scherer Graham Scott David L. Steffen Kim C. Worley Paula E. Burch Geoffrey Okwuonu Sandra Hines Lora Lewis Christine DeRamo Oliver Delgado Shannon Dugan-Rocha George Miner Margaret Morgan Alicia Hawes Rachel Gill Robert A. Holt Mark D. Adams Peter G. Amanatides Holly Baden-Tillson Mary Barnstead Soo H. Chin Cheryl Evans Steve Ferriera Carl Fosler Anna Glodek Zhiping Gu D. E. Jennings Cheryl Kraft T. Nguyen Cynthia Pfannkoch Cynthia D. Sitter Granger Sutton Sourav Chatterji Trevor Woodage Douglas R. Smith Hongmei Lee Erik Gustafson Patrick Cahill A. Kana Lynn Doucette‐Stamm Jim Wingrove Jeanette P. Schmidt Robert B. Weiss Diane M. Dunn Eric D. Green Robert W. Blakesley Gerard G. Bouffard Pieter J. de Jong Kazutoyo Osoegawa Baoli Zhu Marco A. Marra Jacqueline E. Schein Ian Bosdet Christopher D. Fjell Steven J.M. Jones Martin Krzywinski Carrie Mathewson Asim Siddiqui Natasja Wye John D. McPherson Shaying Zhao Claire M. Fraser Jyoti Shetty S. Shatsman Keita Geer Yixin Chen Sofyia Abramzon William C. Nierman Richard A. Gibbs George M. Weinstock Paul Havlak Rui Chen K. James Durbin R. Simons Yanru Ren Xingzhi Song Bingshan Li Yue Liu Xiang Qin Simon Cawley George M. Weinstock Kim C. Worley Austin J. Cooney Richard A. Gibbs Lisa M. D'Souza Kirt Martin Jia Qian Wu Manuel L. Gonzalez‐Garay Andrew Jackson Kenneth J. Kalafus Michael P. McLeod Aleksandar Milosavljevic Davinder Virk А. А. Волков David A. Wheeler

10.1038/nature02426 article EN Nature 2004-04-01

A survey of genetic diversity cattle suggests two domestication events in Asia and selection by husbandry.

10.1126/science.1167936 article EN Science 2009-04-23

Atlas is a suite of programs developed for assembly genomes by "combined approach" that uses DNA sequence reads from both BACs and whole-genome shotgun (WGS) libraries. The BAC clones afford advantages localized with reduced computational load, provide robust method dealing repeated sequences. Inclusion WGS sequences facilitates use different clone insert sizes reduces data production costs. A core function software recruitment into appropriate based on overlaps. Because construction...

10.1101/gr.2264004 article EN cc-by-nc Genome Research 2004-04-01

Abstract Background We present here the assembly of bovine genome. The method combines BAC plus WGS local used for rat and sea urchin with whole genome shotgun (WGS) only many other animal genomes including rhesus macaque. Results process consisted multiple phases: First, BACs were assembled generated sequence, then subsequently in combination individual overlapping reads. Different parameters tested to separately optimize performance each In parallel, a second was produced using sequences...

10.1186/1471-2164-10-180 article EN cc-by BMC Genomics 2009-04-24

Campylobacter jejuni (C. jejuni), is a leading cause of food-borne pathogen, poses significant threats to poultry industry and public health. Post-transcriptional modifications play crucial roles in regulating the immune system cell functions. However, epigenetic regulation response C. inoculation chicken remains elusive. The RNA transcriptional profiles base modification alterations cecum following were characterized using direct sequencing analyzed by bio-informatics expression analysis....

10.1186/s12864-025-11564-3 article EN cc-by-nc-nd BMC Genomics 2025-04-14

Abstract Background Rhesus macaques are the most widely utilized nonhuman primate model in biomedical research. Previous efforts have validated fewer than 900 single nucleotide polymorphisms (SNPs) this species, which limits opportunities for genetic studies related to health and disease. Extensive information about SNPs other variation rhesus would facilitate valuable analyses, as well provide markers genome-wide linkage analysis management of captive breeding colonies. Results We used...

10.1186/1471-2164-12-311 article EN cc-by BMC Genomics 2011-06-13

Vegetable oil is a major edible and an important industrial raw material. However, breeders have found it challenging to improve the content of crop seeds, little known about regulators with potential increase via molecular engineering in modern breeding. We reported F-box protein, Arabidopsis thaliana MYB Interaction Factor 1 (AtMIF1), which member ubiquitin-protein ligase E3 complex involved 26S proteasome protein degradation pathway. AtMIF1 physically interacts domain 5 (MYB5), results...

10.1111/nph.17016 article EN New Phytologist 2020-10-24
Coming Soon ...