- Protein purification and stability
- Protein Structure and Dynamics
- Enzyme Structure and Function
- Proteins in Food Systems
- Monoclonal and Polyclonal Antibodies Research
- RNA Research and Splicing
- Viral Infectious Diseases and Gene Expression in Insects
- Analytical Chemistry and Chromatography
- Enzyme Catalysis and Immobilization
- Enzyme Production and Characterization
- Transgenic Plants and Applications
- Spectroscopy and Quantum Chemical Studies
- Protein Interaction Studies and Fluorescence Analysis
- RNA Interference and Gene Delivery
- DNA and Nucleic Acid Chemistry
- Crystallization and Solubility Studies
- Carbon Nanotubes in Composites
- Terahertz technology and applications
- Lipid Membrane Structure and Behavior
- Glycosylation and Glycoproteins Research
- Prion Diseases and Protein Misfolding
- RNA and protein synthesis mechanisms
- Mass Spectrometry Techniques and Applications
- Mechanical and Optical Resonators
- Muscle metabolism and nutrition
University of Tsukuba
2016-2025
University of Cyprus
2023
Alliance Protein Laboratories (United States)
2010-2011
Japan Science and Technology Agency
2010
Tokyo Gakugei University
2010
Life Science Center for Survival Dynamics, Tsukuba Advanced Research Alliance (TARA)
2009
Japan Advanced Institute of Science and Technology
2001-2008
Kitasato University
2008
Osaka University
1995-2005
Protein Research Foundation
1995-2002
Plasma medicine is an attractive new research area, but the principles of plasma modification biomolecules in aqueous solution remain elusive. In this study, we investigated chemical effects atmospheric-pressure cold on 20 naturally occurring amino acids solution. High-resolution mass spectrometry revealed that modifications 14 were observed after treatment: (i) hydroxylation and nitration aromatic rings tyrosine, phenylalanine tryptophan; (ii) sulfonation disulfide linkage formation thiol...
Each protein folds into a unique and native structure spontaneously. However, during the unfolding or refolding process, often tends to form aggregates. To establish method prevent undesirable aggregation increase stability of structures under deterioration conditions, two types thermal unfolding-induced dilution-induced from denatured state, were studied in presence additional amino acids ions using lysozyme as model protein. Among 15 tested, arginine exhibited best results preventing...
Abstract Plasma medicine is an attractive new research area, but fundamental information related to plasma modification of biomacromolecules in aqueous solution remains elusive. As described herein, we investigated the chemical effects low‐temperature atmospheric pressure on protein using lysozyme as a model. treatment decreased enzymatic activity and changed secondary structure that results from increased molecular weight with modification. These arise neither UV light nor heat, suggesting...
Unacceptably high viscosity is observed in protein concentration formulations due to extremely large therapeutic dose of antibodies and volume restriction subcutaneous route administration. Here, we show that a aggregation suppressor, arginine hydrochloride (ArgHCl), specifically decreases antibody formulations. The viscosities bovine gamma globulin (BGG) solution at 250 mg/mL human (HGG) 292 physiological pH were too for injections, but decreased an acceptable level (below 50 cP) the...
Liquid droplets formed inside the cell by liquid-liquid phase separation maintain membrane-less condensates/bodies (or compartments). These are important for concentrating certain molecules and facilitating spatiotemporal regulation of cellular functions. 1,6-hexanediol (1,6-HD), an aliphatic alcohol, inhibits weak hydrophobic protein-protein/protein-RNA interactions required droplet formation (droplet melting activity) is used here to elucidate process cytoplasmic/nuclear...
Proteins tend to form inactive aggregates at high temperatures. We show that polyamines, which have a relatively simple structure as oligoamids, effectively prevent thermal inactivation and aggregation of hen egg lysozyme. In the presence additives, including arginine guanidine (100 microM), more than 30% 0.2 mg x mL(-1) lysozyme in sodium phosphate buffer (pH 6.5) formed insoluble by heat treatment (98 degrees C for 30 min). However, 50 mm spermine or spermidine, no were observed after same...
Liquid–liquid phase separation (LLPS) of proteins and DNA has recently emerged as a possible mechanism underlying the dynamic organization chromatin. We herein report role quadruplex folding in liquid droplet formation via LLPS induced by interactions between linker histone H1 (H1), key regulator chromatin organization. Fluidity measurements inside droplets, binding assays using G-quadruplex-selective probes, structural analyses based on circular dichroism demonstrated that structures, such...
The poor aqueous solubility of drug substances hampers their broader applications. This paper describes a de novo strategy to increase the using an arginine-assisted solubilization system (AASS) with alkyl gallates as model substances. Solubility experiments showed that arginine greatly increases different gallates, whose solubilities differ widely. In contrast, lysine marginal effects on solubility. Molecular dynamic simulation indicated greater interaction than lysine, which reflects...
Several general mechanisms of metallocenter biosynthesis have been reported and reviewed, in all cases, the components or subunits an apoprotein remain final holoprotein. Here, we first discovered that one subunit apoenzyme did not functional holoenzyme. The cobalt-containing low-molecular-mass nitrile hydratase (L-NHase) Rhodococcus rhodochrous J1 consists beta- alpha-subunits encoded by nhlBA genes, respectively. An ORF, nhlE, just downstream nhlBA, was found to be necessary for L-NHase...
While biotechnological applications of arginine (Arg) as a solution additive that prevents protein aggregation are increasing, the molecular mechanism its effects remains unclear. In this study, we investigated Arg–lysozyme complex by high-resolution crystallographic analysis. Three Arg molecules were observed to be in close proximity aromatic amino acid residues surface, and their occupancies gradually increased with increasing concentration. These interactions mediated electrostatic,...
Sterilization of certain infected areas the human body surface is necessary for dental and surgical therapies. Because blood filled with fluid, sterilization in solution essential. In vitro has been successively carried out using a combination low-temperature atmospheric-pressure plasma reduced pH method, where sufficiently acidic. Here, we show molecular mechanism such based on microbiology. Three kinds bacteria were inactivated by treatment under various conditions. The theoretical...
Arginine is a versatile additive to prevent protein aggregation. This paper shows that arginine ethylester (ArgEE) prevents heat‐induced inactivation and aggregation of hen egg lysozyme more effectively than or guanidine. The addition ArgEE decreased the melting temperature lysozyme. data could be interpreted in terms binding unfolded lysozyme, possibly through ethylated carboxyl group, which leads effective prevention intermolecular interaction among aggregation‐prone molecules. suggest...
Proteins have evolved to acquire highly specialized biological functions and are ideal for various applications in both medicine biotechnology, although denaturation is one of the major problems protein chemistry. Here, we show a novel strategy regulation preservation enzymatic activity even after heat treatment by complex formation with cationic smart copolymer, poly(N,N-diethylaminoethyl methacrylate)-graft-poly(ethylene glycol) (PEAMA-g-PEG). PEAMA-g-PEG suppressed lysozyme completely...
Artificial enzyme activators are of great interest for applications in a wide range research fields. Here, we report an hyperactivation system using polyelectrolytes that complementary to charged substrates. The activity α-chymotrypsin (ChT) cationic substrate increased 7-fold at pH 7.0 the presence anionic poly(acrylic acid) (PAAc) and 18-fold poly(allylamine) (PAA). Analysis salt effects, kinetics, dynamic light scattering (DLS), circular dichroism (CD) indicated activation results from...