A5049494884- Research in Cotton Cultivation
- Plant Molecular Biology Research
- Plant Stress Responses and Tolerance
- Plant Reproductive Biology
- Photosynthetic Processes and Mechanisms
- Molecular Biology Techniques and Applications
- Plant Virus Research Studies
- Plant Gene Expression Analysis
- Plant tissue culture and regeneration
- Plant and Fungal Interactions Research
- Plant nutrient uptake and metabolism
- Cancer-related molecular mechanisms research
- Plant Disease Resistance and Genetics
- Plant Parasitism and Resistance
- Plant biochemistry and biosynthesis
- Plant-Microbe Interactions and Immunity
- Studies on Chitinases and Chitosanases
- Enzyme Structure and Function
- Carbon and Quantum Dots Applications
- Signaling Pathways in Disease
- Innovation and Socioeconomic Development
- Advanced Cellulose Research Studies
- Plant Genetic and Mutation Studies
- Lipid metabolism and biosynthesis
- 14-3-3 protein interactions
Chinese Academy of Agricultural Sciences
2016-2025
Cotton Research Institute
2016-2025
Zhengzhou University
2018-2024
Anyang Institute of Technology
2023
Bridge University
2022
State Key Laboratory of Cotton Biology
2020-2021
Shandong Agricultural University
2008-2012
MicroRNAs (miRNAs) and small interfering RNAs (siRNAs) are short (19–25 nucleotides) non-coding RNA molecules that have large-scale regulatory effects on development stress responses in plants. Verticillium wilt is a vascular disease plants caused by the fungal pathogen dahliae. The objective of this study to investigate transcriptional profile miRNAs other Verticillium–inoculated cotton roots. Four libraries were constructed from mocked infected roots two cultured species which with...
Recent researches on long noncoding RNAs (lncRNAs) have expanded our horizon of gene regulation and the cellular complexity. However, number, characteristics expression patterns lncRNAs remain poorly characterized how these biogenesis are regulated in response to drought stress cotton still largely unclear. In study, using a reproducibility-based RNA-sequencing bioinformatics strategy analyze 9 samples under three different environment stresses (control, re-watering, replications), we...
Oxidative stress reflects an imbalance between the systemic manifestation of reactive oxygen species (ROS) and a biological system's ability to readily detoxify intermediates or repair resulting damage. Glutaredoxins (GRXs) are ubiquitous oxidoreductase enzymes involved in diverse cellular processes play key role oxidative responsive mechanisms. This study was aimed explore structure–function relationship provide framework for functional validation biochemical characterization various GRX...
Abstract Background Cotton is an important industrial crop and a pioneer for saline-alkali land restoration. However, the molecular mechanism underlying cotton response to salt not completely understood. Methods Here, we used metabolome data transcriptome analyze tolerance regulatory network of metabolic biomarkers. Results In this study, was stressed at 400 m M NaCl 0 h, 3 24 h 48 h. interfered with gene expression, altered metabolite contents affected plant growth. Metabolome analysis...
Incorporating green manure is a vital strategy for optimizing cropping systems and improving soil quality. However, it unclear whether the effects of different types on subsequent cotton yield fertility improvement are uniform. This study evaluated three incorporation treatments over two-year cycle (Chinese violet-cotton-Chinese violet-cotton (T1), rapeseed-cotton-rapeseed-cotton (T2), ryegrass-cotton-hairy vetch-cotton (T3)) components. These were also compared with winter fallow-cotton...
Trehalose (a-D-glucopyranosyl a-D-glucopyranoside) is a nonreducing disaccharide and widely distributed in bacteria, fungi, algae, plants invertebrates. In the study, identification of trehalose-6-phosphate synthase (TPS) genes stress-related cotton, genetic structure analysis molecular evolution TPSs were conducted with bioinformatics methods, which could lay foundation for further research TPS functions cotton. The genome information Gossypium raimondii (group D), G. arboreum L. A),...
Mitogen-activated protein kinase (MAPK) cascades are conserved signal transduction pathways in all eukaryotic organisms. MAPKKKs (MAPK kinases) operate at the top levels of these cascades. Recently, this family genes has been systematically investigated Arabidopsis, rice and maize, but not yet characterized cotton. In study, we identified 78 putative MAPKKK genome diploid cotton, Gossypium raimondii. They were classified into three subfamilies, which 12 ZIK, 22 MEKK 44 Raf. The ZIK displayed...
The TEOSINTE BRANCHED 1, CYCLOIDEA, and PROLIFERATING CELL FACTORS (TCP) gene family is a group of plant-specific transcription factors that have versatile functions in developmental processes stress responses. In this study, total 73 TCP genes upland cotton were identified characterizated. Phylogenetic analysis classified them into three subgroups: 50 belonged to PCF, 16 CIN, 7 CYC/TB1. GhTCP are randomly distributed 22 the 26 chromosomes cotton. Expression patterns GhTCPs analyzed 10...
Abstract Background Cotton ( Gossypium hirsutum ) is considered a fairly salt tolerant crop however, salinity can still cause significant economic losses by affecting the yield and deteriorating fiber quality. We studied salt-tolerant upland cotton cultivar under temporal stress to unfold tolerance molecular mechanisms. Biochemical response (400 mM) was measured at 0 h, 3 12 24 h 48 post intervals single-molecule long-read sequencing technology from Pacific Biosciences (PacBio) combined with...
Glutamate decarboxylase (GAD) mainly regulated the biosynthesis of γ-aminobutyric acid (GABA) and played an important role in plant growth stress resistance. To explore potential function GAD cotton growth, genome-wide identification, structure, expression analysis genes were performed this study. There 10, 9, 5, 5 identified G. hirsutum, barbadense, arboreum, raimondii, respectively. was divided into four clades according to protein motif composition, gene phylogenetic relationship. The...
Small RNAs play an important role in regulating plant responses to abiotic stress. Depending on the method of salt application, whether sudden or gradual, plants may experience either shock stress, respectively. In this study, small RNA expression response and long-term stress parallel experiments was described. Cotton libraries were constructed sequenced under normal conditions, as well gradual application. A total 225 cotton microRNAs (miRNAs) identified these 24 novel miRNAs. There 88 75...
Although efforts have been taken to exploit diversity for yield and quality improvements, limited progress on using beneficial alleles in domesticated undomesticated cotton varieties is limited. Given the complexity amount of genomic information since completion four genomes, characterizing significant variations haplotype block inheritance under artificial selection has challenging. Here we sequenced Gossypium hirsutum L. cv CRI-12 (the variety with largest acreage China), its parental...
Ca2+ is an essential nutrient for plants and animals which plays important role in plant signal transduction. Although the function regulation of mechanism alleviating various biotic abiotic stresses have been studied deeply, molecular to adapt high stress still unclear cotton. In this study, 103 cotton accessions were germinated under 200 mM CaCl2 stress, two extremely Ca2+-resistant (Zhong 9807, R) Ca2+-sensitive (CRI 50, S) genotypes selected from accessions. The then 5 days 0...
The BES1 (BRI1-EMSSUPPRESSOR1) gene family is a unique class of transcription factors that play dynamic roles in the Brassinosteroids (BRs) signaling pathway. published genome sequences large number plants provide an opportunity to identify and perform comprehensive functional study on for their potential developmental processes stress responses. A total 135 genes 27 plant species were recognized characterized, which divided into five well-conserved subfamilies. was not found lower plants,...
Abstract Background DNA methylation is an important epigenetic mode of genomic modification and plays a vital role in maintaining content regulating gene expression. Cytosine-5 methyltransferase ( C5-MTase) are the key enzymes process methylation. However, there no systematic analysis C5-MTase cotton so far, function DNMT2 genes has not been studied. Methods In this study, whole genome coding was identified analyzed using bioinformatics method based on information from genome, GhDMT6 further...
Drought and salinity severely retard cotton growth development, resulting in a substantial reduction global production. To investigate the molecular mechanisms underlying plant response, we compared transcriptomic proteomic expression profiles of seedlings exposed to drought or salt stress using RNA-sequencing iTRAQ sequencing, respectively, gain comprehensive understanding common specific responses plants stress. The complexity transcriptional post-transcriptional regulations...
Abstract Background Flavonols play important roles in antioxidation and anticancer activities, longevity, cardiovascular protection. Flavonol synthase ( FLS ) is a key enzyme for flavonol synthesis. Result Phenotypic, transcriptional metabolic data were analyzed, which showed that there was close relationship between salt stress flavonoids, flavonols significantly upregulated under stress. Nine, seven, four, four genes identified Gossypium hirsutum , barbadense arboreum raimondii,...
Salinity stress is a major abiotic factor that affects crop output, and as pioneer in saline alkaline land, salt tolerance study of cotton particularly important. In our experiment, four salt-tolerance varieties with different indexes including CRI35 (65.04%), Kanghuanwei164 (56.19%), Zhong9807 (55.20%) CRI44 (50.50%), well salt-sensitive Hengmian3 (48.21%), GK50 (40.20%), Xinyan96-48 (34.90%), ZhongS9612 (24.80%) were used the materials. These materials divided into salt-tolerant group (ST)...