Rodrigo Vidal

ORCID: 0000-0003-4266-959X
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About
Contact & Profiles
Research Areas
  • Aquaculture disease management and microbiota
  • Genomics and Phylogenetic Studies
  • Identification and Quantification in Food
  • Genetic diversity and population structure
  • Fish Ecology and Management Studies
  • MicroRNA in disease regulation
  • Aquaculture Nutrition and Growth
  • Marine and coastal plant biology
  • Cancer-related molecular mechanisms research
  • Environmental DNA in Biodiversity Studies
  • Parasite Biology and Host Interactions
  • Marine Biology and Ecology Research
  • interferon and immune responses
  • Marine and fisheries research
  • Animal Genetics and Reproduction
  • Molecular Biology Techniques and Applications
  • Marine Bivalve and Aquaculture Studies
  • Plant Molecular Biology Research
  • Fish Biology and Ecology Studies
  • Phytochemical Studies and Bioactivities
  • Epigenetics and DNA Methylation
  • Hops Chemistry and Applications
  • Genetic and phenotypic traits in livestock
  • Invertebrate Immune Response Mechanisms
  • Coral and Marine Ecosystems Studies

Universidad de Santiago de Chile
2014-2025

Austral University of Chile
2023

Universidad Bernardo O'Higgins
2008-2018

University of Concepción
2018

Universidad Andrés Bello
2018

Pontificia Universidad Católica de Chile
2000-2008

Universidade Federal do Rio Grande do Sul
2006

Universidade de Santiago de Compostela
2000-2001

Instituto de Investigacións Mariñas
2001

Abstract The whole-genome duplication 80 million years ago of the common ancestor salmonids (salmonid-specific fourth vertebrate duplication, Ss4R) provides unique opportunities to learn about evolutionary fate a duplicated genome in 70 extant lineages. Here we present high-quality assembly for Atlantic salmon ( Salmo salar ), and show that large genomic reorganizations, coinciding with bursts transposon-mediated repeat expansions, were crucial post-Ss4R rediploidization process. Comparisons...

10.1038/nature17164 article EN cc-by Nature 2016-04-15

The International Collaboration to Sequence the Atlantic Salmon Genome (ICSASG) will produce a genome sequence that identifies and physically maps all genes in salmon acts as reference for other salmonids.

10.1186/gb-2010-11-9-403 article EN cc-by Genome biology 2010-09-01

This study uses phylogenetic relationships of New World representatives the species-rich genus Astragalus (Leguminosae; Papilionoideae) to follow up on recent evidence pointing rapid and plant diversification patterns in Andes. Bayesian maximum likelihood analyses were done using nuclear rDNA ITS chloroplast spacers trnD-trnT trnfM-trnS1, either separately or combination. The effect partitioned vs. nonpartitioned a approach was evaluated. Highest resolution obtained when data combined...

10.3732/ajb.0800017 article EN American Journal of Botany 2008-07-23

Abstract Metal pollution is a major global issue in aquatic environments, affecting environmental quality and potentially altering host–parasite dynamics. This study evaluates the buffering role of larval trematode Himasthla sp. under experimental conditions to test effect copper (Cu) exposure on survival marine snail Echinolittorina peruviana. Snails were collected from intertidal rocky pools over two-month period Coloso (23°45’S, 70°28’W), northern Chile, identified as parasitized or...

10.1017/s0022149x2500015x article EN Journal of Helminthology 2025-01-01

A síndrome de Down (SD) ou trissomia do cromossomo 21 é uma alteração genética produzida pela presença um a mais no par número 21. Isso quer dizer que, as pessoas com SD têm 47 cromossomos em suas células ao invés 46, como maior parte da população. Nesse sentido, este estudo, objetivamos compreender ocorre inclusão e o processo ensino-aprendizagem crianças partir análise dos artigos selecionados nos periódicos acadêmicos que publicam sobre tema. Trata-se pesquisa bibliográfica abordagem...

10.31416/rsdv.v13i1.1207 article PT Revista Semiárido De Visu 2025-04-05

The use of DNA-based methodologies in identification hake species belonging to the Merluccius genus was shown be successful. A short fragment left hypervariable domain mitochondrial control region amplified, sequenced, and digested from 11 species. hake-specific PCR product, due its limited size, obtained a variety tissue samples with different levels DNA concentration degradation, including sterilized food products. On basis this phylogenetically informative 156-bp sequence were selected...

10.1021/jf010421f article EN Journal of Agricultural and Food Chemistry 2001-10-05

Varying levels of lupin (Lupinus albus), peas (Pisum sativum) and rapeseed (Brassica napus) meals were evaluated as partial replacements for fishmeal in extruded diets rainbow trout, with particular emphasis on the effect growth performance expression three genes associated immune response. A series 10 isonitrogenous (450 g kg−1 crude protein) isolipidic (17 g kg−1 lipid) formulated to contain different (150 g kg−1, 250 g kg−1 350 g kg−1), cake (100 g kg−1, 200 g kg−1 300 g kg−1) pea...

10.1111/j.1365-2095.2012.00961.x article EN Aquaculture Nutrition 2012-06-08

Patagonian toothfish (Dissostichus eleginoides) is a hefty notothenioid fish and key species within the marine ecosystem with high migratory capacity across sub-Antarctic south American Pacific oceans. Transcriptome characterization molecular markers associated micro macro-evolutionary studies are not available, which in turn limits gain of knowledge about genetic basis this species. Therefore, present study, de novo transcriptome from eight tissue an embryonic state was developed, using...

10.3389/fmars.2019.00720 article EN cc-by Frontiers in Marine Science 2019-11-29

Metal pollution is a worldwide problem and one of the greatest threats to ecosystem integrity due its toxicity, persistence, bioaccumulation in biological systems. Anthropogenic impacts marine organisms host-parasite dynamics, with northern Chilean coast experiencing elevated copper levels waters sediments mining activities. In this study, we assessed effects exposure concentrations at low high-water temperatures on survival longevity parasite Himasthla sp. cercariae (Trematoda: Digenea)...

10.1371/journal.pone.0310473 article EN cc-by PLoS ONE 2024-11-05

Both the records and descriptions of crustose species coralline algae on southeastern coast South America are from early 1900s. Unlike other Chile, biogeography distribution corallines have not been studied despite their abundance. Through recent studies, it has determined that genus Spongites is most conspicuous along rocky intertidal Chilean coasts. It also common to entire Southern Hemisphere; however, relationship between possible reasons for unknown. We used nuclear mitochondrial...

10.1111/j.1529-8817.2007.00431.x article EN Journal of Phycology 2008-01-09

Sorgoleone (SGL) exuded by sorghum roots inhibits the development of some weeds. Due to its high hydrophobicity, it is expected that SGL presents low soil mobility and limited allelopathic activity in field. This work aims evaluate sorptivity sorgoleone octanol-water under two solvent systems. The systems were methanol:water (60:40) (MeOH:H2O) pure methanol (MeOH). These promote different conditions for solubility. Treatments arranged a 2 × 6 factorial (solvent equilibrium concentrations...

10.1080/03601230600613780 article EN Journal of Environmental Science and Health Part B 2006-05-04

A set of expressed sequence tag-simple repeat (EST-SSR) markers for the genus Mytilus was developed through bioinformatic mining GenBank public database. total 33 782 EST sequences from were downloaded and screened di-, tri- tetranucleotide, with 1274 containing SSR markers. Nine microsatellite characterized in californianus a number alleles per locus ranging two to six, observed expected heterozygosities 0.490 0.730 0.510 0.860 respectively. Cross-species amplification achieved several...

10.1111/j.1755-0998.2009.02682.x article EN Molecular Ecology Resources 2009-03-31

Innate pathway activation is fundamental for early antiviral defense in fish, but currently there insufficient understanding of how salmonid fish identify viral molecules and activate these pathways.The Toll-like receptor (TLR) believed to play a crucial role host pathogenic microbes the innate immune system.In present study, full-length cDNA Salmo salar TLR3 (ssTLR3) was cloned.The ssTLR3 sequence 6071 bp long, containing an open reading frame 2754 encoding 971 amino acids.The TLR group...

10.4238/2015.june.8.5 article EN Genetics and Molecular Research 2015-01-01

MicroRNAs are key non-coding RNA molecules that play a relevant role in the regulation of gene expression through translational repression and/or transcript cleavage during normal development and physiological adaptation processes like stress. Quantitative reverse transcription polymerase chain reaction (RT-qPCR) has become approach normally used to determine levels microRNAs. However, this needs use endogenous reference. An improper selection references can result confusing interpretation...

10.1038/s41598-017-01970-3 article EN cc-by Scientific Reports 2017-05-05

Abstract We describe an emerging initiative - the ‘Functional Analysis of All Salmonid Genomes’ (FAASG), which will leverage extensive trait diversity that has evolved since a whole genome duplication event in salmonid ancestor, to develop integrative understanding functional genomic basis phenotypic variation. The outcomes FAASG have diverse applications, ranging from improved evolution, through improving efficiency and sustainability aquaculture production, supporting future fundamental...

10.1101/095737 preprint EN cc-by-nc-nd bioRxiv (Cold Spring Harbor Laboratory) 2016-12-20

The Atlantic salmon (Salmo salar) is a very valuable commercial salmonid species.As with other aquaculture species, intensive of often faces disease problems especially in early life stages which can limit stable production the species.'Ssa miRNAs DB', bioinformatics and manually curated database, aims at providing comprehensive resource microRNA Altantic salmon, user friendly interface for convenient retrieval each entry by ID or target gene.The current version Ssa DB involved prediction 41...

10.6026/97320630008284 article EN cc-by Bioinformation 2012-03-31
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