Yili Chen

ORCID: 0000-0001-9999-9413
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About
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Research Areas
  • Cancer, Lipids, and Metabolism
  • Cancer, Hypoxia, and Metabolism
  • Cancer-related molecular mechanisms research
  • Metabolomics and Mass Spectrometry Studies
  • Circular RNAs in diseases
  • Marine and coastal plant biology
  • RNA modifications and cancer
  • Antibiotic Resistance in Bacteria
  • MicroRNA in disease regulation
  • Bioinformatics and Genomic Networks
  • Sphingolipid Metabolism and Signaling
  • Coastal wetland ecosystem dynamics
  • Plant-derived Lignans Synthesis and Bioactivity
  • Ubiquitin and proteasome pathways
  • Cancer Diagnosis and Treatment
  • Endoplasmic Reticulum Stress and Disease
  • Ferroptosis and cancer prognosis
  • Protein Tyrosine Phosphatases
  • Gene expression and cancer classification
  • Pluripotent Stem Cells Research
  • RNA Research and Splicing
  • Carbohydrate Chemistry and Synthesis
  • Steroid Chemistry and Biochemistry
  • Antibiotic Use and Resistance
  • Bacterial biofilms and quorum sensing

Sun Yat-sen University
2011-2025

The First Affiliated Hospital, Sun Yat-sen University
2012-2025

Sichuan University
2025

Ningbo University
2022-2024

National Cheng Kung University
2022-2023

Fujian Medical University
2023

Fujian Provincial Cancer Hospital
2023

Zhejiang University of Technology
2020-2022

Harbin Medical University
2022

Second Affiliated Hospital of Harbin Medical University
2022

Nemo-like kinase (NLK) is an evolutionarily conserved protein involved in Wnt/beta-catenin signaling, which has been reported to be associated with gliomagenesis. In the present study, we aimed identify a concrete mechanism of pathway regulation by microRNAs (miRNAs) glioma. Quantitative reverse-transcription polymerase chain reaction and situ hybridization were conducted detect expression miR-92b. The cell proliferation rate cycle kinetics detected using 3-(4,5)-dimethylthiahiazo...

10.1093/neuonc/not004 article EN Neuro-Oncology 2013-02-14

A key limitation in using heterologous genomic or metagenomic libraries functional genomics and genome engineering is the low expression of genes screening hosts, such as Escherichia coli. To overcome this limitation, here we generate E. coli strains capable recognizing promoters by expressing sigma factors. Among seven factors tested, RpoD from Lactobacillus plantarum (Lpl) appears to be able initiating transcription all sources DNA. Using promoter GFP-trap concept, successfully screen...

10.1038/ncomms8045 article EN cc-by Nature Communications 2015-05-06

Hepatocellular carcinoma (HCC) accounts for almost 80% of all liver cancer cases and is the sixth most common second cause cancer-related death worldwide. The survival rate sorafenib-treated advanced HCC patients still unsatisfactory. Unfortunately, no useful biomarkers have been verified to predict sorafenib efficacy in HCC.We assessed a resistance-related microarray dataset found that anterior gradient 2 (AGR2) highly associated with overall recurrence-free several clinical parameters HCC....

10.1186/s12935-023-02879-w article EN cc-by Cancer Cell International 2023-03-10

Enhancement of protein synthesis from mRNA translation is one the key steps supporting cardiomyocyte hypertrophy during cardiac remodeling. The methyltransferase-like5 (METTL5), which catalyzes m6A modification 18S rRNA at position A1832, has been shown to regulate efficiency differentiation ES cells and growth cancer cells. It remains unknown whether how METTL5 regulates hypertrophy. In this study, we have generated a mouse model, METTL5-cKO, with cardiac-specific depletion in vivo. Loss...

10.3389/fcvm.2022.852775 article EN cc-by Frontiers in Cardiovascular Medicine 2022-02-28

From initial human papillomavirus (HPV) infection and precursor stages, the development of cervical cancer takes decades. High-sensitivity HPV DNA testing is currently recommended as primary screening method for cancer, whereas better triage methodologies are encouraged to provide accurate risk management HPV-positive women. Given that virus-driven genomic variation accumulates during carcinogenesis, we designed a 39 Mb custom capture panel targeting 17 types 522 mutant genes related cancer....

10.1093/carcin/bgz094 article EN Carcinogenesis 2019-05-16

Background: Atrial fibrillation (AF) is prevalent in dialysis-dependent patients, who face higher risks of thromboembolism and bleeding. Although vitamin K antagonists (VKAs) are commonly used for anticoagulation, the benefits factor Xa (FXa) inhibitors over VKAs this population unclear. This systematic review aims to compare efficacy safety FXa based on randomized controlled trials (RCTs). Methods: We conducted a search PubMed Embase RCTs comparing up November 2024. The primary outcome was...

10.1055/a-2544-7919 article EN Thrombosis and Haemostasis 2025-02-24

The MYC genes encode nuclear sequence specific–binding DNA-binding proteins that are pleiotropic regulators of cellular function, and the c-MYC proto-oncogene is deregulated and/or mutated in most human cancers. Experimental studies binding to genome not fully consistent. While many recognition sites can be identified responsive genes, other motif matches—even experimentally confirmed sites—are associated with showing no response. We have developed a computational model integrates multiple...

10.1371/journal.pcbi.0030063 article EN cc-by PLoS Computational Biology 2007-04-04

For insight into transcriptional mechanisms mediating physiological responses to GH, data mining was performed on a profile of GH-regulated genes induced or inhibited at different times in highly responsive 3T3-F442A adipocytes. Gene set enrichment analysis indicated that are enriched pathways including phosphoinositide and insulin signaling suggested suppressor cytokine 2 (SOCS2) 3' kinase regulatory subunit p85alpha (Pik3r1) important targets. Model-based Chinese restaurant clustering...

10.1210/en.2009-0212 article EN Endocrinology 2009-04-30

This study introduces an optical DNA-based logic circuit that mimics a half-subtractor. The system contains Au-surface immobilized molecular-beacon molecule serves as dual-gate and outputs two series of fluorescence signals following Boolean INH XOR patterns after interacting with one or single-stranded DNA molecules input. To the best our knowledge, reported herein is rather concise compared to other molecular gate systems.

10.1039/c3cc44823a article EN Chemical Communications 2013-01-01

Resistance against ceftazidime-avibactam (CZA) in carbapenem-resistant Pseudomonas aeruginosa (CRPA) is emerging. This study was aimed at detecting the prevalence and molecular characteristics of CZA-resistant CRPA clinical isolates Guangdong Province, China. The antimicrobial susceptibility profile these strains determined. A subset 16 analysed by whole-genome sequencing (WGS). Genetic surroundings carbapenem resistance genes pan-genome-wide association analysis were further studied. Of 250...

10.1016/j.jgar.2024.01.014 article EN cc-by-nc-nd Journal of Global Antimicrobial Resistance 2024-02-01

Ceramide synthases (CSs) produce ceramides from long-chain bases (LCBs). However, how CSs regulate immunity and cell death in Arabidopsis thaliana remains unclear. Here, we decipher the roles of two classes CS, CSI (LAG1 HOMOLOG 2, LOH2) CSII (LOH1/3), these processes. The loh1-2 loh1-1 loh3-1 mutants were resistant to bacterial pathogen Pseudomonas syringae pv maculicola (Psm) DG3 exhibited programmed (PCD), along with increased LCBs ceramides, at later stages. In loh1-2, Psm resistance,...

10.3389/fpls.2022.824585 article EN cc-by Frontiers in Plant Science 2022-04-07

Acinetobacter baumannii, a strictly aerobic, non-lactose fermented Gram-negative bacteria, is one of the important pathogens nosocomial infection. Major facilitator superfamily (MFS) transporter membrane proteins are class that widely exists in microbial genomes and have been revealed to be related biofilm formation variety microorganisms. However, as MFS proteins, little known about role BIT33_RS14560 A. baumannii. To explore effects on abilities 62 isolates were firstly investigated...

10.3389/fmicb.2022.867770 article EN cc-by Frontiers in Microbiology 2022-04-25
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