Е. А. Воропаева

ORCID: 0000-0002-0463-0136
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About
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Research Areas
  • Pneumonia and Respiratory Infections
  • Bacterial Infections and Vaccines
  • Urinary Tract Infections Management
  • Respiratory viral infections research
  • Pediatric health and respiratory diseases
  • Reproductive tract infections research
  • Reproductive System and Pregnancy
  • Respiratory and Cough-Related Research
  • Cytomegalovirus and herpesvirus research
  • HIV, TB, and STIs Epidemiology
  • Probiotics and Fermented Foods
  • Herpesvirus Infections and Treatments
  • Antibiotic Resistance in Bacteria
  • Antibiotics Pharmacokinetics and Efficacy
  • Pelvic floor disorders treatments
  • Salivary Gland Disorders and Functions
  • Dermatology and Skin Diseases
  • Zoonotic diseases and public health
  • Preterm Birth and Chorioamnionitis
  • Toxoplasma gondii Research Studies
  • Lipoproteins and Cardiovascular Health
  • thermodynamics and calorimetric analyses
  • Medical and Agricultural Research Studies
  • Diabetes and associated disorders
  • Psoriasis: Treatment and Pathogenesis

Gabrichevsky Institute of Epidemiology and Microbiology
2006-2024

Pirogov Russian National Research Medical University
2023

Federal Service for Surveillance on Consumer Rights Protection and Human Wellbeing
2019-2022

University of Duisburg-Essen
2007

Stephanie W. Lo Rebecca A. Gladstone Andries J. van Tonder John A. Lees Mignon du Plessis and 84 more Rachel Benisty Noga Givon‐Lavi Paulina A. Hawkins Jennifer Cornick Brenda Kwambana-Adams Pierra Y. Law Pak‐Leung Ho Martín Antonio Dean Everett Ron Dagan Anne von Gottberg Keith P. Klugman Lesley McGee Robert F. Breiman Stephen D. Bentley Abdullah Brooks Alejandra Corso Alexander Davydov Alison J. Maguire Andrew J. Pollard Anmol Kiran Anna Skoczyńska Benild Moiane Bernard Beall Betuel Sigaúque David M. Aanensen Deborah Lehmann Diego Faccone Ebenezer Foster-Nyarko Ebrima Bojang Egorova Ea Е. А. Воропаева Eric Sampane-Donkor Ewa Sadowy Godfrey Bigogo Hélio Mucavele Houria Belabbès Idrissa Diawara Jennifer C. Moïsi Jennifer R. Verani Jeremy D. Keenan Jyothish Bhai Kedibone Ndlangisa Khalid Zerouali K L Ravikumar Leonid Titov Linda de Gouveia Maaike Alaerts Margaret Ip Maria Cristina de Cunto Brandileone Md Hasanuzzaman Metka Paragi Michele Nurse-Lucas Mushal Ali Naima Elmdaghri Nicholas J. Croucher Nicole Wolter Nurit Porat Özgen Köseoğlu Eser Patrick Eberechi Akpaka Paul Turner Paula Gagetti Peggy-Estelle Tientcheu Philip E. Carter Rafal Mostowy Rama Kandasamy Rebecca Ford Rebecca Henderson Roly Malaker Sadia Shakoor Samanta Cristine Grassi Almeida Samir K. Saha Sanjay Doiphode Shabir A. Madhi Shamala Devi Sekaran Somporn Srifuengfung Stephen Obaro Stuart C. Clarke Susan Nzenze Tamara Kastrin Theresa J. Ochoa Balaji Veeraraghavan Waleria Hryniewicz Yulia Urban

Invasive pneumococcal disease remains an important health priority owing to increasing incidence caused by pneumococci expressing non-vaccine serotypes. We previously defined 621 Global Pneumococcal Sequence Clusters (GPSCs) analysing 20 027 isolates collected worldwide and from published genomic data. In this study, we aimed investigate the lineages behind predominant serotypes, mechanism of serotype replacement in disease, as well major contributing invasive post-vaccine era their...

10.1016/s1473-3099(19)30297-x article EN cc-by The Lancet Infectious Diseases 2019-06-10
Sophie Belman Noémie Lefrancq Susan Nzenze Sarah Downs Mignon du Plessis and 92 more Stephanie W. Lo Alejandra Corso Paula Gagetti Abdullah Brooks Md Hasanuzzaman Samir K. Saha Senjuti Saha Alexander Davydov Leonid Titov Samanta Cristine Grassi Almeida Paul Turner Chunjiang Zhao Hui Wang Margaret Ip Pak‐Leung Ho Pierra Y. Law Jeremy D. Keenan Robert Cohen Emmanuelle Varon Eric S. Donkor Balaji Veeraraghavan Geetha Nagaraj Ravikumar Kadahalli Lingegowda Yuvaraj Jayaraman Varun Shamanna Noga Rachel Benisty Ron Dagan Godfrey Bigogo Jennifer R. Verani Anmol Kiran Dean Everett Jennifer Cornick Maaike Alaerts Shamala Devi Sekaran Stuart C. Clarke Benild Moiane Betuel Sigaúque Hélio Mucavele Andrew J. Pollard Rama Kandasamy Philip E. Carter Stephen Obaro Deborah Lehmann Rebecca Ford Theresa J. Ochoa Anna Skoczyńska Ewa Sadowy Waleria Hryniewicz Weronika Puzia Sanjay Doiphode Egorova Ea Е. А. Воропаева Yulia Urban Tamara Kastrin Kedibone Ndlangisa Linda de Gouveia Mushal Ali Nicole Wolter Cebile Lekhuleni Carmen Muñoz‐Almagro Alba Redin Alonso Desirée Henares Somporn Srifuengfung Brenda Kwambana-Adams Ebenezer Foster-Nyarko Ebrima Bojang Martín Antonio Peggy-Estelle Tientcheu Jennifer C. Moïsi Michele Nurse-Lucas Patrick Eberechi Akpaka Özgen Köseoğlu Eser Anthony Scott David M. Aanensen Nicholas J. Croucher John A. Lees Rebecca A. Gladstone Gerry Tonkin‐Hill Chrispin Chaguza David Cleary Kate C. Mellor Bernard Beall Keith P. Klugman Gail L. Rodgers Paulina A. Hawkins Anne J. Blaschke Nicole L Pershing Lesley McGee Shabir A. Madhi Anne von Gottberg Stephen D. Bentley Henrik Salje

Abstract Streptococcus pneumoniae is a leading cause of pneumonia and meningitis worldwide. Many different serotypes co-circulate endemically in any one location 1,2 . The extent mechanisms spread vaccine-driven changes fitness antimicrobial resistance remain largely unquantified. Here using geolocated genome sequences from South Africa ( n = 6,910, collected 2000 to 2014), we developed models reconstruct spread, pairing detailed human mobility data genomic data. Separately, estimated the...

10.1038/s41586-024-07626-3 article EN cc-by Nature 2024-07-03
Joshua C D'Aeth Mark PG van der Linden Lesley McGee Hermı́nia de Lencastre Paul Turner and 94 more Jae-Hoon Song Stephanie W. Lo Rebecca A. Gladstone Raquel Sá‐Leão Kwan Soo Ko William P. Hanage Robert F. Breiman Bernard Beall Stephen D. Bentley Nicholas J. Croucher Alejandra Corso Diego Faccone Paula Gagetti Abdullah Brooks Md Hasanuzzaman Roly Malaker Samir K. Saha Alexander Davydov Leonid Titov Maria Cristina de Cunto Brandileone Samanta Cristine Grassi Almeida Margaret Ip Pak‐Leung Ho Pierra Y. Law Chunjiang Zhao Hui Wang Jeremy D. Keenan Eric Sampane-Donkor Balaji Veeraraghavan Geetha Nagaraj KL Ravikumar Noga Givon‐Lavi Nurit Porat Rachel Benisty Ron Dagan Godfrey Bigogo Jennifer R. Verani Anmol Kiran Dean Everett Jennifer Cornick Maaike Alaerts Shamala Devi Sekaran Stuart C. Clarke Houria Belabbès Idrissa Diawara Khalid Zerouali Naima Elmdaghri Benild Moiane Betuel Sigaúque Hélio Mucavele Andrew J. Pollard Rama Kandasamy Philip E. Carter Stephen Obaro Sadia Shakoor Deborah Lehmann Rebecca Ford Theresa J. Ochoa Anna Skoczyńska Ewa Sadowy Waleria Hryniewicz Sanjay Doiphode Egorova Ea Е. А. Воропаева Yulia Urban Metka Paragi Tamara Kastrin Anne von Gottberg Kedibone Ndlangisa Linda de Gouveia Mignon du Plessis Mushal Ali Nicole Wolter Shabir A. Madhi Susan Nzenze Somporn Srifuengfung Brenda Kwambana-Adams Ebenezer Foster-Nyarko Ebrima Bojang Martín Antonio Peggy-Estelle Tientcheu Jennifer C. Moïsi Michele Nurse-Lucas Patrick Eberechi Akpaka Özgen Köseoğlu Eser Alison J. Maguire David M. Aanensen Leon J. Bentley Jyothish Bhai Rafal Mostowy John A. Lees Keith P. Klugman Paulina A. Hawkins David Cleary

Multidrug-resistant Streptococcus pneumoniae emerge through the modification of core genome loci by interspecies homologous recombinations, and acquisition gene cassettes. Both occurred in otherwise contrasting histories antibiotic-resistant S. lineages PMEN3 PMEN9. A single clade spread globally, evading vaccine-induced immunity frequent serotype switching, whereas locally circulating PMEN9 clades independently gained resistance. repeatedly integrated Tn 916 -type 1207.1 elements,...

10.7554/elife.67113 article EN public-domain eLife 2021-07-14
Rebecca A. Gladstone Lotta Siira Ola Brynildsrud Didrik F. Vestrheim Paul Turner and 86 more Stuart C. Clarke Somporn Srifuengfung Rebecca Ford Deborah Lehmann Egorova Ea Е. А. Воропаева Gunnsteinn Haraldsson Karl G. Kristinsson Lesley McGee Robert F. Breiman Stephen D. Bentley Carmen Sheppard Norman K. Fry Jukka Corander Maija Toropainen Anneke Steens Patrick Eberechi Akpaka Krow Ampofo Martín Antonio Balaji Veeraraghavan Bernard Beall Houria Belabbès Rachel Benisty Godfrey Bigogo Abdullah Brooks Philip E. Carter Jennifer Cornick Alejandra Corso Maria Cristina de Cunto Brandileone Samanta Cristine Grassi Almeida Nicholas J. Croucher Ron Dagan Alexander Davydov Idrissa Diawara Sanjay Doiphode Mignon du Plessis Naima Elmdaghri Özgen Köseoğlu Eser Dean Everett Diego Faccone Paula Gagetti Noga Givon‐Lavi Md Hasanuzzaman Paulina A. Hawkins Waleria Hryniewicz Kristina G. Hultén Margaret Ip Aurélie Kapusta Rama Kandasamy Tamara Kastrin Jeremy D. Keenan Keith P. Klugman Brenda Kwambana-Adams Pierra Y. Law John A. Lees Pak‐Leung Ho Yuan Li Stephanie W. Lo Theresa J. Ochoa Shabir A. Madhi Benjamin J. Metcalf Jennifer C. Moïsi Helio Mucavele Fundação Manhiça Kedibone Ndlangisa Michele Nurse-Lucas Susan Nzenze Stephen Obaro Metka Paragi Andrew J. Pollard KL Ravikumar Ewa Sadowy Samir K. Saha Eric Sampane-Donkor Shamala Devi Sekaran Sadia Shakoor Shrijana Shrestha Betuel Sigaúque Anna Skoczyńska Kwan Soo Ko Peggy-Estelle Tientcheu Leonid Titov Yulia Urban Jennifer R. Verani Andries J. van Tonder Anne von Gottberg Nicole Wolter

Pneumococcal disease outbreaks of vaccine preventable serotype 4 sequence type (ST)801 in shipyards have been reported several countries. We aimed to use genomics establish any international links between them.Sequence data from ST801-related outbreak isolates Norway (n = 17), Finland 11) and Northern Ireland 2) were combined with invasive pneumococcal surveillance the respective countries, genomes an collection 41 > 40,000), totalling 106 genomes. Raw mapped recombination excluded before...

10.1016/j.vaccine.2021.10.046 article EN cc-by Vaccine 2022-01-05

Background. Ezetimibe has shown efficacy in the therapy of hypercholesterolemia renal transplant patients. This is first study investigating effect ezetimibe on function kidney recipients.

10.1093/ndt/gfm620 article EN Nephrology Dialysis Transplantation 2007-08-17
Stephanie W. Lo Rebecca A. Gladstone Andries J. van Tonder Mignon du Plessis Jennifer Cornick and 89 more Paulina A. Hawkins Shabir A. Madhi Susan Nzenze Rama Kandasamy K L Ravikumar Naima Elmdaghri Brenda Kwambana-Adams Samanta Cristine Grassi Almeida Anna Skoczyńska Egorova Ea Leonid Titov Samir K. Saha Metka Paragi Dean Everett Martín Antonio Keith P. Klugman Yuan Li Benjamin J. Metcalf Bernard Beall Lesley McGee Robert F. Breiman Stephen D. Bentley Anne von Gottberg Abdullah Brooks Alejandra Corso Alexander Davydov Alison J. Maguire Andrew J. Pollard Anmol Kiran Anna Skoczyńska Benild Moiane Betuel Sigaúque David M. Aanensen Deborah Lehmann Diego Faccone Ebenezer Foster-Nyarko Ebrima Bojang Е. А. Воропаева Eric Sampane-Donkor Ewa Sadowy Geetha Nagaraj Godfrey Bigogo Hélio Mucavele Houria Belabbès Idrissa Diawara Jennifer C. Moïsi Jennifer R. Verani Jeremy D. Keenan Jyothish Bhai Kedibone Ndlangisa Khalid Zerouali Linda de Gouveia Maaike Alaerts Maria-Cristina de Cunto Brandileone Margaret Ip Md Hasanuzzaman Metka Paragi Mushal Ali Nicholas J. Croucher Nicole Wolter Noga Givon‐Lavi Özgen Köseoğlu Eser Pak‐Leung Ho Patrick Eberechi Akpaka Paul Turner Paula Gagetti Peggy-Estelle Tientcheu Philip E. Carter Pierra Y. Law Rachel Benisty Rafal Mostowy Rebecca Ford Rebecca Henderson Roly Malaker Ron Dagan Sadia Shakoor Sanjay Doiphode Sanjay Doiphode Shamala Devi Sekaran Somporn Srifuengfung Shamala Devi Sekaran Somporn Srifuengfung Stephen Obaro Stuart C. Clarke Tamara Kastrin Theresa J. Ochoa Waleria Hryniewicz Balaji Veeraraghavan Yulia Urban

Abstract Objectives We reported tet(S/M) in Streptococcus pneumoniae and investigated its temporal spread relation to nationwide clinical interventions. Methods whole-genome sequenced 12 254 pneumococcal isolates from 29 countries on an Illumina HiSeq sequencer. Serotype, multilocus ST antibiotic resistance were inferred genomes. An SNP tree was built using Gubbins. Temporal reconstructed a birth–death model. Results identified 131 none carried other known tet genes. Tetracycline...

10.1093/jac/dkz477 article EN cc-by Journal of Antimicrobial Chemotherapy 2019-11-26

Invasive pneumococcal disease remains one of the leading causes morbidity and mortality worldwide. In Russia, 13- valent conjugate vaccine (PCV13) was introduced into childhood immunization programme nationwide in 2014. As part Global Pneumococcal Sequencing Project (GPS), we used genome data to characterize 179 isolates collected from Russia 2011-2018 investigate circulating strains using a standardized genomic definition lineages (global sequence clusters, GPSCs), prevalent serotypes...

10.1099/mgen.0.000851 article EN cc-by Microbial Genomics 2022-09-16

According to Russian classification, bacterial vaginosis (BV) and nonspecific vaginitis (NSV) are two different clinical conditions. The vaginal microbiota was evaluated in 200 women (50 healthy pregnant (HPW) during the first trimester, 100 patients with BV 50 NSV). samples received from both (121 samples) (BV 241 samples, NSV 136 contained lactobacilli (96.5%), peptostreptococci (52.2%), streptococci (36.4%), bifidobacteria (48.2%), propionibacteria (34.3%). Other microorganisms...

10.3402/mehd.v18i2.7694 article EN Microbial Ecology in Health and Disease 2006-06-01

According to Russian classification, bacterial vaginosis (BV) and nonspecific vaginitis (NSV) are two different clinical conditions. The vaginal microbiota was evaluated in 200 women (50 healthy pregnant (HPW) during the first trimester, 100 patients with BV 50 NSV). samples received from both (121 samples) (BV 241 samples, NSV 136 contained lactobacilli (96.5%), peptostreptococci (52.2%), streptococci (36.4%), bifidobacteria (48.2%), propionibacteria (34.3%). Other microorganisms...

10.1080/17482960600891473 article EN cc-by Microbial Ecology in Health and Disease 2006-01-01

According to the World Health Organization, every year about 1 million cases of purulent bacterial meningitis (PBM) are registered in world, which 200 thousand end death. Bacterial is polyethiologic, makes task determining pathogen main organization epidemiological surveillance, treatment regimens, planning preventive and anti-epidemic measures. The quality laboratory diagnostics has a key influence on this. true incidence different etiology can be altered at low-efficiency diagnostics. This...

10.18821/0869-2084-2019-64-2-117-121 article EN cc-by Russian Clinical Laboratory Diagnostics 2019-04-29

The aim of the present systematic literature review is to summarize data on role TLRs in maintaining homeostasis female genitals, physiological development pregnancy, provision anti-infective resistance pregnant women with intrauterine infection. substantiates importance genitals as a necessary and determining factor reaction various changes environment, also responsible for metabolic, structural, or energy, maintenance homeostasis. As universal regulators vital activity organism conjunction...

10.15789/2220-7619-2018-3-251-262 article EN cc-by Russian Journal of Infection and Immunity 2018-11-01

Alteration of microbiota composition is a trigger, and, sometimes, an etiological factor in the development chronic skin diseases, e.g., psoriasis or eczema. Recognition microflora by keratinocytes and immune cells leads to production antimicrobial peptides, chemokines growth factors, which contribute differentiation T lymphocytes autoaggressive effector Th1, Th17 Th22 types that implement autoimmune inflammation psoriatic plaque. The aim our work was study differences spectrum parameters...

10.46235/1028-7221-13086-dit article EN cc-by Russian Journal of Immunology 2023-09-22

The effect of dental gel with astaxanthin and polyprenol on the detection toxicity local irritant laboratory animals was evaluated. inflammatory reaction, wound healing effect, hematological biochemical parameters were studied when using a polyprenol. When conducting study animals, showed absence effect. antioxidant properties, as well effects animals.

10.59315/orlhnp.2024-3-1.31-42 article EN Otorhinolaryngology, Head and Neck Pathology. 2024-03-30

Introduction. Chronic and latent infections are often activated during pregnancy.Aim - to asses the pathogenetic role of microbial pathogens in urogenital tract infection (UTI) pregnant women.Materials methods. 89 women underwent general clinical examination, examination smears from urethra, vagina, cervical canal; bacteriological analysis vaginal contents; enzyme-linked immunosorbent assay, polymerase chain reaction determination specific antibodies for verification herpes simplex virus...

10.36233/0372-9311-2019-6-13-20 article EN cc-by Journal of microbiology epidemiology immunobiology 2019-12-13

Background. The current epidemiology of pneumococcal meningitis in Ukraine, Georgia and countries CIS is poorly studied. In order to ensure an effective vaccination strategy post-vaccination surveillance, we examined the serotype distribution patterns following regions: European (Ukraine, Belarus), Transcaucasian (Azerbaijan, Armenia, Georgia), Asian (Uzbekistan, Kyrgyzstan, Kazakhstan). study was performed within program for Invasive Bacterial Diseases Sentinel Surveillance implemented...

10.31631/2073-3046-2017-16-3-39-49 article EN cc-by Epidemiology and Vaccinal Prevention 2017-06-20
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