A5066652535- Research in Cotton Cultivation
- Plant Molecular Biology Research
- Plant Virus Research Studies
- Plant Reproductive Biology
- Plant and Fungal Interactions Research
- Plant Gene Expression Analysis
- Polysaccharides and Plant Cell Walls
- Photosynthetic Processes and Mechanisms
- Cocoa and Sweet Potato Agronomy
- Plant nutrient uptake and metabolism
- Reproductive Biology and Fertility
- RNA and protein synthesis mechanisms
- Microbial Metabolites in Food Biotechnology
- Biological and pharmacological studies of plants
- Phytochemistry and Biological Activities
- Nuclear Structure and Function
- Plant tissue culture and regeneration
- Nitrogen and Sulfur Effects on Brassica
- Insect Resistance and Genetics
- Plant Stress Responses and Tolerance
- Advanced Cellulose Research Studies
- Animal Genetics and Reproduction
- Chromosomal and Genetic Variations
- RNA Research and Splicing
- Genetic Mapping and Diversity in Plants and Animals
Zhejiang A & F University
2021-2024
Chinese Academy of Agricultural Sciences
2013-2024
Cotton Research Institute
2013-2024
Zhengzhou University
2023
Chinese Academy of Agricultural Engineering
2023
State Key Laboratory of Cotton Biology
2020
Anyang Institute of Technology
2019
Members of the AT-HOOK MOTIF CONTAINING NUCLEAR LOCALIZED (AHL) family are involved in various plant biological processes via protein-DNA and protein-protein interaction. However, no systematic identification analysis AHL gene have been reported cotton.To investigate potential functions AHLs cotton, genome-wide identification, expressions structure were performed this study. 48, 51 99 genes identified from G.raimondii, G.arboreum G.hirsutum genome, respectively. Phylogenetic revealed that...
C-TERMINALLY ENCODED PEPTIDEs (CEPs) are a class of peptide hormones that have been shown in previous studies to play an important role regulating the development and response abiotic stress model plants. However, their cotton is not well understood. In this study, we identified 54, 59, 34, 35 CEP genes from Gossypium hirsutum (2n = 4x 52, AD1), G. barbadense (AD2), arboreum 2X 26, A2), raimondii D5), respectively. Sequence alignment phylogenetic analyses indicate proteins can be categorized...
The SWEET (Sugars will eventually be exported transporters) gene family plays multiple roles in plant physiological activities and development process. It participates reproductive the process of sugar transport absorption, senescence stress responses plant-pathogen interaction. However, thecomprehensive analysis genes has not been reported cotton. In this study, we identified 22, 31, 55 60 from sequenced genomes Gossypium arboreum, G. raimondii, hirsutum barbadense, respectively....
With 1 figure and 6 tables Abstract Seed yield per plant is one of the most important traits rapeseed, it determined by three component viz. siliques plant, seeds silique (SS) seed weight (SW). In this study, quantitative trait loci (QTL) mapping for SS SW was conducted in doubled haploid immortalized F 2 populations cross ‘Quantum’ × ‘No.2127 17’. The correlation analysis showed that had a significant negative with SW. Using data from natural field trials, 4 11 QTL were detected,...
Summary Branch length is an important plant architecture trait in cotton ( Gossypium ) breeding. Development of cultivars with short branch has been proposed as a main object to enhance yield potential, because they are suitable for high planting density. Here, we report the molecular cloning and characterization semi‐dominant quantitative locus, Short Internode 1 GhSBI1 ), which encodes NAC transcription factor homologous CUP‐SHAPED COTYLEDON 2 (CUC2) regulated by microRNA ghr‐miR164. We...
Abstract CS‐B14Sh and CS‐B22Sh are cotton interspecific chromosome substitution (CS)‐B lines, in which a pair of short arms 14 22 were introgressed from Gossypium barbadense doubled‐haploid line 3‐79 with the background hirsutum TM‐1, respectively. These two CS‐B lines crossed segregating progenies (F 2 F 2:3 , respectively) obtained. Phenotypic data lint yield, yield‐related traits fibre‐quality collected trials. In cross CS‐B14SH X QTL for boll weight (BW), percentage (LP), fibre upper...
Drought-induced 19 (Di19) protein is a Cys2/His2 (C2H2) type zinc-finger protein, which plays crucial role in plant development and response to abiotic stress. This study systematically investigated the characteristics of GhDi19 gene family, including member number, structure, chromosomal distribution, promoter cis-elements, expression profiles. Transcriptomic analysis indicated that some GhDi19s were up-regulated under heat salt Particularly, two nuclear localized proteins, GhDi19-3...
Abstract Lacking of reference genome sequence for the development stable molecular markers specific chromosomes (intervals) remains to be a challenge in cotton, which was necessary step fine mapping gene ( QTL ). In this study, feasibility single‐nucleotide polymorphism SNP ) between CS ‐ B 14 S h (a substitution line short arm C hromosome 14) and TM ‐1 (the recurrent parent) explored using next‐generation sequencing NGS based on reduced representation libraries RRL s). High‐quality...
The calmodulin-binding protein 60 (CBP60) family is a gene unique to plants, and its members play crucial role in plant defense responses pathogens growth development. Considering that cotton the primary source of natural textile fiber, functional study CBP60 critical. In this research, we successfully identified 162 from genomes 21 species. Of these, 72 were found four species, divided into clades. To understand function GhCBP60B depth, conducted detailed analysis sequence, structure,...
Abstract Background Cytokinin oxidase/dehydrogenase ( CKX ) plays a vital role in response to abiotic stress through modulating the antioxidant enzyme activities. Nevertheless, biological function of gene family has yet be reported cotton. Result In this study, total 27 GhCKXs were identified by genome-wide investigation and distributed across 18 chromosomes. Phylogenetic tree analysis revealed that genes clustered into four clades, most expansions originated from segmental duplications. The...
Cotton ( Gossypium ) seed fibers can be divided into lint (long) or fuzz (very short). Using fiberless (fuzzless-lintless) mutants, the initiation gene Li 3 was identified by map-based cloning. The is an R2R3-MYB transcription factor located on chromosome D12 GhMML3_D12 ). Sequence analysis revealed that li a loss-of-function allele containing retrotransposon insertion in second exon completely blocks gene’s expression. genetic loci n 2 and underlying recessive fuzzless phenotype hirsutum...
SUN-domain containing proteins are crucial nuclear membrane involved in a plethora of biological functions, including meiosis, morphology, and embryonic development, but their evolutionary history functional divergence obscure. In all, 216 SUN from protists, fungi, plants were divided into two monophyletic clades (Cter-SUN Mid-SUN). We performed comprehensive analyses, investigating the characteristics different subfamilies plants. Mid-SUNs further evolved subgroups, SUN3 SUN5, before...
Dendrobium catenatum, which grows on the semi humid rocks in mountains, has been at top of ‘Nine Immortals China’ since ancient times. It is a kind yin tonic medicine and its main active component polysaccharide. Cellulose synthase-like D(CslD) genes were predicted to catalyse biosynthesis 1,4-β-d-glycan backbone hemicelluloses, plays fundamental roles plant development. To investigate role CslD development D. eight (DcCslD1,2a,2b,3a,3b,4a,4b,5) identified. The results protein prediction...
The Jumonji C (JmjC) domain-containing protein family, an important family of histone demethylase in plants, can directly reverse methylation and play roles various growth development processes. In the present study, 51
Phospholipases As (PLAs) are acyl hydrolases that catalyze the release of free fatty acids in phospholipids and play multiple functions plant growth development. The three families PLAs are: PLA1, PLA2 (sPLA), patatin-related PLA (pPLA). diverse pPLAs development a broad range plants have been demonstrated by prior studies.Genome-wide analysis pPLA gene family screening genes for expression verification silencing were conducted. Additionally, pollen vitality testing, pattern, detection POD,...
The open-bud (ob) mutants in cotton display abnormal flower buds with the stigma and upper anthers exposed before blooming. This characteristic is potentially useful for efficient production of hybrid seeds. recessive inheritance pattern ob phenotype allotetraploid determined by duplicated loci (ob1ob1ob2ob2). In this study, ob1, which a MIXTA-like MYB gene on chromosome D13 (MML10_Dt), was identified map-based cloning. Gossypium barbadense (Gb) acc. 3-79, single nucleotide polymorphism...
Alkaline/neutral invertase (NI) proteins irreversibly break down sucrose into glucose and fructose play a vital role in carbohydrate plant growth development. Currently, comprehensive understanding of NI genes Dendrobium catenatum is lacking. After genome-wide identification prediction, nine DcNI were identified named DcNI1–DcNI9. Through analysis gene structure, amino acid sequence, conserved motif phylogenetic tree, it was found that the family has typical region its sequence similar to...
Abstract Background BRVIS RADIX (BRX) family is a small gene with the highly conserved plant-specific BRX domains, which plays important roles in plant development and response to abiotic stress. Although protein has been studied other plants, biological function of cotton - like ( BRXL ) still elusive. Result In this study, total 36 genes were identified four species. Whole genome or segmental duplications played main role expansion GhBRXL during evolutionary process cotton. These clustered...