Marina Toplak

ORCID: 0000-0003-2581-9082
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About
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Research Areas
  • Microbial Natural Products and Biosynthesis
  • Photosynthetic Processes and Mechanisms
  • Metal-Catalyzed Oxygenation Mechanisms
  • Enzyme Catalysis and Immobilization
  • Cassava research and cyanide
  • Plant tissue culture and regeneration
  • Plant Gene Expression Analysis
  • GABA and Rice Research
  • Microbial Metabolic Engineering and Bioproduction
  • Berberine and alkaloids research
  • Metabolism and Genetic Disorders
  • Enzyme-mediated dye degradation
  • Plant Genetic and Mutation Studies
  • Plant biochemistry and biosynthesis
  • Catalysis for Biomass Conversion
  • Microbial bioremediation and biosurfactants
  • Cyclopropane Reaction Mechanisms
  • Microbial Metabolism and Applications
  • Amino Acid Enzymes and Metabolism
  • Carbohydrate Chemistry and Synthesis
  • Biotin and Related Studies
  • Advanced oxidation water treatment
  • Plant Pathogens and Fungal Diseases
  • Computational Drug Discovery Methods
  • Phytochemistry and biological activities of Ficus species

Graz University of Technology
2017-2024

University of Freiburg
2020-2024

Robert Bosch (Germany)
2021

Laboratoire de Chimie Moléculaire et Thioorganique
2021

Institute of Biochemistry
2016-2018

Ene reductases from the Old Yellow Enzyme (OYE) family reduce C=C double bond in α,β-unsaturated compounds bearing an electron-withdrawing group, for example, a carbonyl group. This asymmetric reduction has been exploited biocatalysis. Going beyond its canonical function, we show that members of this enzyme can also catalyze formation C-C bonds. α,β-Unsaturated aldehydes and ketones containing additional electrophilic group undergo reductive cyclization. Mechanistically, two-electron-reduced...

10.1002/anie.201802962 article EN cc-by Angewandte Chemie International Edition 2018-04-24

Bacterial tropone natural products such as tropolone, tropodithietic acid, or the roseobacticides play crucial roles in various terrestrial and marine symbiotic interactions virulence factors, antibiotics, algaecides, quorum sensing signals. We now show that their poorly understood biosynthesis depends on a shunt product from aerobic CoA-dependent phenylacetic acid catabolism is salvaged by dedicated acyl-CoA dehydrogenase-like flavoenzyme TdaE. Further characterization of TdaE revealed an...

10.1021/jacs.1c04996 article EN cc-by Journal of the American Chemical Society 2021-07-01

Paracoccidioidomycosis (PCM), caused by Paracoccidioides , is a systemic mycosis with granulomatous character and restricted therapeutic arsenal. The aim of this work was to search for new alternatives treat largely neglected tropical mycosis, such as PCM.

10.1128/aac.01097-18 article EN Antimicrobial Agents and Chemotherapy 2018-10-17

The structural diversification of natural products is instrumental to their versatile bioactivities. In this context, redox tailoring enzymes are commonly involved in the modification and functionalization advanced pathway intermediates en route mature products. recent years, flavoprotein monooxygenases have been shown mediate numerous reactions that include not only (aromatic) hydroxylation, Baeyer–Villiger oxidation, or epoxidation but also oxygenations coupled extensive remodeling carbon...

10.1021/acs.biochem.1c00763 article EN cc-by Biochemistry 2021-12-28

The biosynthesis of the bacterial antibiotic dihydroxytropolone was reconstituted in vitro starting from a catabolic shunt product. involved key flavoprotein monooxygenase TrlE further structurally and mechanistically characterized.

10.1039/d4sc01715c article EN cc-by Chemical Science 2024-01-01

The berberine bridge enzyme from the California poppy Eschscholzia californica ( Ec BBE ) catalyzes oxidative cyclization of S )‐reticuline to )‐scoulerine, that is, formation in biosynthesis benzylisoquinoline alkaloids. Interestingly, a large number ‐ like genes have been identified plants lack alkaloid biosynthesis. This finding raised question primordial role plant kingdom, which prompted us investigate closest relative Physcomitrella patens Pp 1), most basal harboring gene. Here, we...

10.1111/febs.14458 article EN cc-by FEBS Journal 2018-04-10

D-2-hydroxyglutaric aciduria is a neurometabolic disorder, characterized by the accumulation of D-2-hydroxyglutarate (D-2HG) in human mitochondria. Increased levels D-2HG are detected humans exhibiting point mutations genes encoding isocitrate dehydrogenase, citrate carrier, electron transferring flavoprotein (ETF) and its downstream acceptor ETF-ubiquinone oxidoreductase or dehydrogenase (hD2HGDH). However, while pathogenicity several amino acid replacements former four proteins has been...

10.1016/j.bbapap.2019.07.008 article EN cc-by-nc-nd Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics 2019-07-23

The medically important bacterial aromatic polyketide natural products typically feature a planar, polycyclic core structure. An exception is found for the rubromycins, whose backbones are disrupted by bisbenzannulated [5,6]-spiroketal pharmacophore that was recently shown to be assembled flavin-dependent enzymes. In particular, flavoprotein monooxygenase proved critical drastic oxidative rearrangement of pentangular precursor and installment an intermediate [6,6]-spiroketal moiety. Here we...

10.1002/anie.202109384 article EN cc-by Angewandte Chemie International Edition 2021-10-15

Abstract En‐Reduktasen der “Old Yellow Enzyme”(OYE)‐Familie reduzieren die C=C‐Doppelbindung in α,β‐ungesättigten Verbindungen, eine elektronenziehende Gruppe (z. B. Carbonyl‐Gruppe) tragen. Diese asymmetrische Reduktion hat Biokatalyse Anwendung gefunden. Es konnte gezeigt werden, dass Mitglieder dieser Enzymfamilie außerdem noch Bildung von C‐C‐Bindungen katalysieren können. Mit Aldehyden und Ketonen, zusätzliche elektrophile enthalten, kann reduktive Cyclisierung erfolgen. Dabei überträgt...

10.1002/ange.201802962 article DE cc-by Angewandte Chemie 2018-04-24

Abstract Antimicrobial resistance represents a major threat to human health and knowledge of the underlying mechanisms is therefore vital. Here, we report discovery characterization oxidoreductases that inactivate broad‐spectrum antibiotic chloramphenicol via dual oxidation C3‐hydroxyl group. Accordingly, either depends on standalone glucose‐methanol‐choline (GMC)‐type flavoenzymes, or additional aldehyde dehydrogenases boost overall turnover. These enzymes also enable inactivation analogues...

10.1002/cbic.202200632 article EN ChemBioChem 2022-11-10

Aim: A structural model of chorismate synthase (CS) from the pathogenic fungus Candida albicans was used for virtual screening simulations. Methods: Docking, molecular dynamics, cell growth inhibition and protein binding assays were search validation. Results: Two molecules termed CS8 CaCS02 identified. Further studies minimal inhibitory concentration demonstrated fungicidal activity against Paracoccidioides brasiliensis with a 512 32 μg·ml-1 CaCS02, respectively. In addition, showed strong...

10.2217/fmb-2019-0052 article EN Future Microbiology 2019-07-01

Electron-transferring flavoproteins (ETFs) have been found in all kingdoms of life, mostly assisting shuttling electrons to the respiratory chain for ATP production. While human (h) ETF has studied great detail, very little is known about biochemical properties homologous protein model organism Saccharomyces cerevisiae (yETF). In view absence client dehydrogenases, example, acyl-CoA dehydrogenases involved β-oxidation fatty acids, d-lactate dehydrogenase 2 (Dld2) appeared be only relevant...

10.1111/febs.14924 article EN cc-by FEBS Journal 2019-05-13

The often complex control of bacterial natural product biosynthesis typically involves global and pathway-specific transcriptional regulators gene expression, which limits the yield bioactive compounds under laboratory conditions. However, little is known about regulation mechanisms on enzymatic level. Here, we report a novel regulatory principle for products involving dedicated acetyltransferase, modifies redox-tailoring enzyme thereby enables pathway furcation alternating pharmacophore...

10.1039/d2sc01952c article EN cc-by Chemical Science 2022-01-01

The efficient inhibition of 5-enolpyruvylshikimate-3-phosphate synthase (EPSPS) by the broad-spectrum herbicide glyphosate validates shikimate pathway as a promising target for developing antimicrobial, fungicidal and herbicidal agents. last enzyme this pathway, chorismate (CS), catalyses an unusual reaction, making it attractive novel inhibitors. Therefore, we tested series azo-dyes their inhibitory potential against CS from pathogenic fungus Paracoccidioides brasiliensis (PbCS) identified...

10.1080/14756366.2024.2427175 article EN cc-by Journal of Enzyme Inhibition and Medicinal Chemistry 2024-12-10

Abstract The medically important bacterial aromatic polyketide natural products typically feature a planar, polycyclic core structure. An exception is found for the rubromycins, whose backbones are disrupted by bisbenzannulated [5,6]‐spiroketal pharmacophore that was recently shown to be assembled flavin‐dependent enzymes. In particular, flavoprotein monooxygenase proved critical drastic oxidative rearrangement of pentangular precursor and installment an intermediate [6,6]‐spiroketal moiety....

10.1002/ange.202109384 article EN Angewandte Chemie 2021-10-15
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