A5059661683- Gut microbiota and health
- Helicobacter pylori-related gastroenterology studies
- Clostridium difficile and Clostridium perfringens research
- Genetics and Physical Performance
- Probiotics and Fermented Foods
- Inflammatory Bowel Disease
- Rheumatoid Arthritis Research and Therapies
- Diet and metabolism studies
- Microbial infections and disease research
- Microscopic Colitis
- Anaerobic Digestion and Biogas Production
- Forensic and Genetic Research
- Wastewater Treatment and Nitrogen Removal
- Iron Metabolism and Disorders
- Gastrointestinal disorders and treatments
- Microbial Metabolites in Food Biotechnology
- Genomics and Phylogenetic Studies
- Bacteriophages and microbial interactions
- Salivary Gland Disorders and Functions
- Mycobacterium research and diagnosis
- Vector-borne infectious diseases
- Phytase and its Applications
- Microbial bioremediation and biosurfactants
- Genetic Associations and Epidemiology
- Aquatic and Environmental Studies
Kazan Federal University
2016-2025
Composting is viewed as one of the primary methods to treat organic wastes. Co-composting may improve efficiency this treatment by establishing most suitable conditions for decomposers than those present in individual Given that bacteria and fungi are driving agents composting, information about composition their communities dynamics during composting reproducibility, performance quality final compost well help evaluate potential human health risk choice appropriate application procedure. In...
Pickering, C, Suraci, B, Semenova, EA, Boulygina, Kostryukova, ES, Kulemin, NA, Borisov, OV, Khabibova, SA, Larin, AK, Pavlenko, AV, Lyubaeva, EV, Popov, DV, Lysenko, Vepkhvadze, TF, Lednev, EM, Leońska-Duniec, A, Pająk, Chycki, J, Moska, W, Lulińska-Kuklik, E, Dornowski, M, Maszczyk, Bradley, Kana-ah, Cięszczyk, P, Generozov, and Ahmetov, II. A genome-wide association study of sprint performance in elite youth football players. J Strength Cond Res 33(9): 2344-2351, 2019-Sprint speed is an...
Several studies have highlighted the role of host-microbiome interactions in pathogenesis inflammatory bowel disease (IBD), resulting an increasing amount data mainly focusing on Western patients. Because prevalence IBD newly industrialized countries such as those Asia, Middle East, and South America, there is mounting interest elucidating gut microbiota these populations. We present a comprehensive analysis several IBD-related biomarkers profiles functions unique population patients with...
Human gut microbiome plays an important role both in health and disease. Use of antibiotics can alter microbiota composition, which leads to various deleterious events. Here we report a whole genome sequencing metagenomic/genomic study the intestinal changes caused by Helicobacter pylori (HP) eradication therapy. The analyzed dataset included 80 metagenomes from 40 patients before after HP obtained SOLiD 5500W technology, 10 ones 4 Illumina HiSeq 2500 19 genomes Enterococcus spp. recovered...
The aim of the study was to taxonomic and functional composition gut microbiota in ulcerative colitis (UC) Crohn's disease (CD) patients identify key markers dysbiosis IBD.Fecal samples obtained from 95 IBD (78 UC 17 CD) as well 96 healthy volunteers were used for whole-genome sequencing carried out on SOLiD 5500 W platform. Taxonomic profiling performed by aligning reeds, not maped hg19, MetaPhlAn2 reference database. Reeds mapped using HUNAnN2 algorithm ChocoPhlAn database assess...
Whole genome sequencing (WGS) has great potential to explore all possible DNA variants associated with physical performance, psychological traits and health conditions of athletes. Here we present, for the first time, annotation genomic elite athletes, based on WGS 20 Tatar male wrestlers. The maximum number high-quality per sample was over 3.8 M single nucleotide polymorphisms (SNPs) about 0.64 indels. nonsense mutations 148 (SNVs) individual. Athletes' genomes average contained 18.9 SNPs...
Erwinia are widely known as phytopathogenic bacteria, but among them, there also plant-friendly strains that can promote plant growth (PGPR). The Erwinia-like strain OPT-41 was isolated from Triticum aestivum seedlings a potential PGPR. cells (0.9–1.3 × 1.5–3.1 µm) of this microorganism Gram-negative, rod-shaped, motile (with peritrichous flagella), and non-spore- non-capsule-forming. 16S rRNA gene sequence analyses showed it is located in the Erwiniaceae family has pairwise similarity above...
There is a wide range of individual variability in the change body weight response to exercise, and this partly depends on genetic factors. The study aimed determine DNA polymorphisms associated with fat loss efficiency untrained women normal 12-week aerobic training program using GWAS approach, followed by cross-sectional athletes. involved 126 young Polish (age 21.4 ± 1.7 years; mass index (BMI): 21.7 (2.4) kg/m2) 550 Russian athletes (229 women, age 23.0 4.1; 321 men, 23.9 4.7). We...
Tumor employs non-cancerous cells to gain beneficial features that promote growth and survival of cancer cells. Despite intensive research in the area tumor microenvironment, there is still a lack reliable reproducible vitro model for tumor-microenvironment cell interaction studies. Herein we report successful development heterogeneous cancer-stroma sphere (CSS) composed prostate adenocarcinoma PC3 immortalized mesenchymal stem (MSC). The CSS demonstrated structured spatial layout cells,...
Ensuring the safety of use probiotics is a top priority. We found that increased resistance to popular antimicrobial drugs in Lactiplantibacillus plantarum accompanied by significant changes genomic profile and phenotypic sensitivity number as well level virulence this bacterium against Drosophila .
Dysbiosis of the gut microbiota in inflammatory bowel disease (IBD) patients is great interest. It has been reported that Crohn's (CD) associated with a general decrease microbial diversity [1]. Altered composition and function CD results imbalance host-bacteria interaction increased immune stimulation [2]. shown characterized by proportion E. coli human contrast to healthy individuals [3]. However, overall qualitative quantitative strains not fully understood. Here, we present dataset...
The aim of this study was to assess changes in skin microbiota wrestlers during training sessions and determine the sensitivity hemolytic bacterial isolates antiseptics.The main obtained from 15 were identified by cultivation method, with following MALDI Biotyper 16S rRNA gene sequencing methods. antiseptics (Veltosept-2, Cutasept F, Chlorhexidine, Miramistin, Hydrogen Peroxide) evaluated measuring size growth inhibition zone on agar plates.Opportunistic bacteria species Bacillus cereus,...
Crohn’s disease (CD) is characterized by a chronic, progressive inflammation across the gastrointestinal tract with series of exacerbations and remissions. A significant factor in CD pathogenesis an imbalance gut microbiota composition, particularly prevalence Escherichia coli. In present study, genomes sixty-three E. coli strains from patients healthy subjects were sequenced. addition, eighteen coli-like metagenome-assembled (MAGs) reconstructed shotgun-metagenome sequencing data fecal...
Lymphedema refers to a group of disorders characterized by the accumulation protein-rich fluid in interstitial tissues, resulting from an imbalance between lymph production and it’s drainage via lymphatic vessels. More than 10 types isolated primary LD is described, among them CELSR1-associated lymphedema are one less studied. A family with two sibs, 17-year-old boy 8-year-old girl, both diagnosed LD, presented clinic. Both patients were observed symptoms at 2-3 months age, swelling right...
While the gut microbiome has been intensively investigated for more than twenty years already, its role in various disorders remains to be unraveled. At same time, questions about what changes microbiota can considered as normal or pathological and whether communities are able recover after exposure negative factors (diseases, medications, environmental factors) still unclear. Here, we describe composition content of short-chain fatty acids adult healthy volunteers (
Oral microbiome changes take place at the initiation of rheumatoid arthritis (RA); however, questions remain regarding oral pre-RA stages in individuals with clinically suspect arthralgia (CSA). Two cross-sectional cohorts were selected including 84 Tatarstan women (15 early-RA as compared to CSA ranging from = 0 [n 22], 1 19], 2 11], and ≥ 3 17]) 42 established RA (median: 5 years diagnosis [IQ: 2-11]). Amplicon sequence variants (ASVs) obtained samples (16S rRNA) analyzed for alpha beta...
Introduction. Crohn's disease (CD) is a chronic inflammation of various parts the gastrointestinal tract with an increased proportion Escherichia coli. However, role E. coli in remains unclear.
 This study aims to evaluate competitive abilities strains from CD patients and healthy volunteers, identify biochemical genetic determinants underlying these features.
 Materials methods. The antagonistic activity was assessed by co-cultivation 11 clinical inhibiting growth K-12,...
Abstract Strain 3.5.1 was isolated from soils of the Republic Tatarstan, Russia, on basis presence a high phytate-degrading activity. Strains with such activities attract special interest because its potential use as feed additives and natural manures. harbors 99 % 16S rRNA nucleotide sequence similarity to different Pantoea species ( P. vagans , ananatis agglomerans anthophila sp .) exhibits unique biochemical properties that do not allow strain identification up species. Moreover, shows...