Paola Masuzzo

ORCID: 0000-0003-3699-1195
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About
Contact & Profiles
Research Areas
  • Cell Image Analysis Techniques
  • Research Data Management Practices
  • Academic Publishing and Open Access
  • Scientific Computing and Data Management
  • Gene expression and cancer classification
  • scientometrics and bibliometrics research
  • Wikis in Education and Collaboration
  • Cellular Mechanics and Interactions
  • Biomedical Text Mining and Ontologies
  • 3D Printing in Biomedical Research
  • Expert finding and Q&A systems
  • Single-cell and spatial transcriptomics
  • Bioinformatics and Genomic Networks
  • Genetics, Bioinformatics, and Biomedical Research
  • Ethics in Clinical Research
  • Data-Driven Disease Surveillance
  • Open Education and E-Learning
  • Social Media in Health Education
  • Artificial Intelligence in Healthcare and Education
  • Service-Learning and Community Engagement
  • Robotics and Automated Systems
  • Microfluidic and Capillary Electrophoresis Applications
  • FinTech, Crowdfunding, Digital Finance
  • Chemistry and Stereochemistry Studies
  • Medicine and Dermatology Studies History

Institute for Globally Distributed Open Research and Education
2019-2023

Ghent University
2013-2021

Open Data Institute
2021

VIB-UGent Center for Medical Biotechnology
2014-2020

Cancer Research Institute Ghent
2018

Health Alliance International
2013-2014

Vlaams Instituut voor Biotechnologie
2013-2014

<ns4:p>Ongoing debates surrounding Open Access to the scholarly literature are multifaceted and complicated by disparate often polarised viewpoints from engaged stakeholders. At current stage, has become such a global issue that it is critical for all involved in publishing, including policymakers, publishers, research funders, governments, learned societies, librarians, academic communities, be well-informed on history, benefits, pitfalls of Access. In spite this, there general lack...

10.12688/f1000research.8460.3 preprint EN cc-by F1000Research 2016-09-21

<ns4:p>Peer review of research articles is a core part our scholarly communication system. In spite its importance, the status and purpose peer often contested. What role in modern digital communications infrastructure? Does it perform to high standards with which generally regarded? Studies have shown that prone bias abuse numerous dimensions, frequently unreliable, can fail detect even fraudulent research. With advent web technologies, we are now witnessing phase innovation experimentation...

10.12688/f1000research.12037.3 preprint EN cc-by F1000Research 2017-11-29

Ongoing debates surrounding Open Access to the scholarly literature are multifaceted and complicated by disparate often polarised viewpoints from engaged stakeholders. At current stage, has become such a global issue that it is critical for all involved in publishing, including policymakers, publishers, research funders, governments, learned societies, librarians, academic communities, be well-informed on history, benefits, pitfalls of Access. In spite this, there general lack consensus...

10.12688/f1000research.8460.1 preprint EN cc-by F1000Research 2016-04-11

The changing world of scholarly communication and the emerging new wave ‘Open Science’ or Research’ has brought to light a number controversial hotly debated topics. Evidence-based rational debate is regularly drowned out by misinformed exaggerated rhetoric, which does not benefit evolving system communication. This article aims provide baseline evidence framework for ten most contested topics, in order help frame move forward discussions, practices, policies. We address issues around...

10.3390/publications7020034 article EN cc-by Publications 2019-05-13

<ns4:p>Peer review of research articles is a core part our scholarly communication system. In spite its importance, the status and purpose peer often contested. What role in modern digital communications infrastructure? Does it perform to high standards with which generally regarded? Studies have shown that prone bias abuse numerous dimensions, frequently unreliable, can fail detect even fraudulent research. With advent Web technologies, we are now witnessing phase innovation experimentation...

10.12688/f1000research.12037.1 preprint EN cc-by F1000Research 2017-07-20

Biological processes are fundamentally driven by complex interactions between biomolecules. Integrated high-throughput omics studies enable multifaceted views of cells, organisms, or their communities. With the advent new post-genomics technologies, becoming increasingly prevalent; yet full impact these can only be realized through data harmonization, sharing, meta-analysis, and integrated research. These essential steps require consistent generation, capture, distribution metadata. To...

10.1089/omi.2013.0149 article EN OMICS A Journal of Integrative Biology 2014-01-01

Abstract In the last decade Open Science principles have been successfully advocated for and are being slowly adopted in different research communities. response to COVID-19 pandemic many publishers researchers sped up their adoption of practices, sometimes embracing them fully partially or a sub-optimal manner. this article, we express concerns about violation some its potential impact on quality output. We provide evidence misuses these at stages scientific process. call wider practices...

10.1101/2020.08.13.249847 preprint EN cc-by bioRxiv (Cold Spring Harbor Laboratory) 2020-08-14

<ns4:p>Ongoing debates surrounding Open Access to the scholarly literature are multifaceted and complicated by disparate often polarised viewpoints from engaged stakeholders. At current stage, has become such a global issue that it is critical for all involved in publishing, including policymakers, publishers, research funders, governments, learned societies, librarians, academic communities, be well-informed on history, benefits, pitfalls of Access. In spite this, there general lack...

10.12688/f1000research.8460.2 preprint EN cc-by F1000Research 2016-06-09

There is no clear-cut boundary between Free and Open Source Software Scholarship, the histories, practices, fundamental principles two remain complex. In this study, we critically appraise intersections differences movements. Based on our thematic comparison here, conclude several key things. First, there substantial scope for new communities of practice to form within scholarly that place sharing collaboration/open participation at their focus. Second, Both practices FOSS can be more deeply...

10.31235/osf.io/2kxq8 article EN 2020-03-06

<ns4:p>Peer review of research articles is a core part our scholarly communication system. In spite its importance, the status and purpose peer often contested. What role in modern digital communications infrastructure? Does it perform to high standards with which generally regarded? Studies have shown that prone bias abuse numerous dimensions, frequently unreliable, can fail detect even fraudulent research. With advent web technologies, we are now witnessing phase innovation experimentation...

10.12688/f1000research.12037.2 preprint EN cc-by F1000Research 2017-11-01

Abstract The systematic study of single-cell migration requires the availability software for assisting data inspection, quality control and analysis. This is especially important high-throughput experiments, where multiple biological conditions are tested in parallel. Although field cell can count on different computational tools segmentation tracking, downstream visualization, parameter extraction statistical analysis still left to user currently not possible within a single tool. article...

10.1038/srep42383 article EN cc-by Scientific Reports 2017-02-13

Cell migration research has become a high-content field. However, the quantitative information encapsulated in these complex and high-dimensional datasets is not fully exploited owing to diversity of experimental protocols non-standardized output formats. In addition, typically are open for reuse. Making data Findable, Accessible, Interoperable, Reusable (FAIR) will enable meta-analysis, integration, mining. Standardized formats controlled vocabularies essential building suitable...

10.1093/gigascience/giaa041 article EN cc-by GigaScience 2020-05-01

The internet era, large-scale computing and storage resources, mobile devices, social media, their high uptake among different groups of people, have all deeply changed the way knowledge is created, communicated, further deployed. These advances enabled a radical transformation practice science, which now more open, global collaborative, closer to society than ever. Open science has therefore become an increasingly important topic. Moreover, as open actively pursued by several high-profile...

10.7287/peerj.preprints.2689v1 preprint EN 2017-01-03

This document aims to agree on a broad, international strategy for the implementation of open scholarship that meets needs different national and regional communities but works globally.Scholarly research can be idealised as an inspirational process advancing our collective knowledge benefit all humankind. However, current practices often struggle with range tensions, in part due fact this (or “commons”) ideal conflicts competitive system which most scholars work, because much infrastructure...

10.31222/osf.io/b4v8p preprint EN 2019-01-30

10.1016/j.tcb.2014.11.005 article EN Trends in Cell Biology 2014-12-05

The changing world of scholarly communication and the emergence ‘Open Science’ or Research’ has brought to light a number controversial hotly-debated topics. Yet, evidence-based rational debate is regularly drowned out by misinformed exaggerated rhetoric, which does not benefit evolving system communication. aim this article provide baseline evidence framework for ten most contested topics, in order help frame move forward discussions, practices policies. We address preprints scooping,...

10.7287/peerj.preprints.27580v1 preprint EN 2019-03-11

The internet era, large-scale computing and storage resources, mobile devices, social media, their high uptake among different groups of people, have all deeply changed the way knowledge is created, communicated, further deployed. These advances enabled a radical transformation practice science, which now more open, global collaborative, closer to society than ever. Open science has therefore become an increasingly important topic. Moreover, as open actively pursued by several high-profile...

10.7287/peerj.preprints.2689 preprint EN 2017-01-03

Abstract Summary: Automated image processing has allowed cell migration research to evolve a high-throughput field. As consequence, there is now an unmet need for data management in this domain. The absence of generic system the quantitative generated assays results each dataset being treated isolation, making comparison across experiments difficult. Moreover, by integrating quality control and analysis capabilities into such system, common practice having manually transfer different...

10.1093/bioinformatics/btt437 article EN cc-by Bioinformatics 2013-08-05

An enormous wealth of digital tools now exists for collaborating on scholarly research projects. In particular, it is possible to collaboratively author articles in an openly participatory and dynamic format. Here we describe provide recommendations a more open process collaboration, discuss the potential issues pitfalls that come with managing large diverse authoring communities. We summarize our personal experiences form ‘ten simple recommendations’. Typically, these collaborative, online...

10.5334/kula.63 article EN cc-by KULA knowledge creation dissemination and preservation studies 2020-04-20

The changing world of scholarly communication and the emergence ‘Open Science’ or Research’ has brought to light a number controversial hotly-debated topics. Yet, evidence-based rational debate is regularly drowned out by misinformed exaggerated rhetoric, which does not benefit evolving system communication. aim this article provide baseline evidence framework for ten most contested topics, in order help frame move forward discussions, practices policies. We address preprints scooping,...

10.7287/peerj.preprints.27580 preprint EN 2019-03-11

The changing world of scholarly communication and the emerging new wave ‘Open Science’ or Research’ has brought to light a number controversial hotly debated topics. Evidencebased rational debate is regularly drowned out by misinformed exaggerated rhetoric, which does not benefit evolving system communication. This article aims provide baseline evidence framework for ten most contested topics, in order help frame move forward discussions, practices, policies. We address issues around...

10.20913/1815-3186-2019-3-3-25 article EN cc-by Bibliosphere 2019-09-30

An enormous wealth of digital tools now exists for collaborating on scholarly research projects. In particular, it is possible to collaboratively author articles in an openly participatory and dynamic format. Here we describe provide recommendations a more open process collaboration, discuss the potential issues pitfalls that come with managing large diverse authoring communities. We summarize our personal experiences form ‘ten simple rules’. Typically, these collaborative, online projects...

10.31222/osf.io/et8ak preprint EN 2019-07-02

Biological processes are fundamentally driven by complex interactions between biomolecules. Integrated high-throughput omics studies enable multifaceted views of cells, organisms, or their communities. With the advent new post-genomics technologies, becoming increasingly prevalent; yet full impact these can only be realized through data harmonization, sharing, meta-analysis, and integrated research. These essential steps require consistent generation, capture, distribution metadata. To...

10.1089/big.2013.0039 article EN Big Data 2013-12-01
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