Tim Ziebarth

ORCID: 0000-0001-6673-198X
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About
Contact & Profiles
Research Areas
  • Receptor Mechanisms and Signaling
  • Neuroscience and Neuropharmacology Research
  • Advanced Fluorescence Microscopy Techniques
  • Neurotransmitter Receptor Influence on Behavior
  • Photoreceptor and optogenetics research
  • Graphene and Nanomaterials Applications
  • Neuroscience and Neural Engineering
  • Neurogenesis and neuroplasticity mechanisms
  • Diet and metabolism studies
  • Carbon Nanotubes in Composites
  • Advanced Chemical Sensor Technologies
  • Electrochemical sensors and biosensors
  • Metabolomics and Mass Spectrometry Studies
  • Analytical Chemistry and Sensors
  • Memory and Neural Mechanisms
  • Advanced biosensing and bioanalysis techniques

Ruhr University Bochum
2020-2024

Neurotransmitters are important signaling molecules in the brain and relevant many diseases. Measuring them with high spatial temporal resolutions biological systems is challenging. Here, we develop a ratiometric fluorescent sensor/probe for catecholamine neurotransmitters on basis of near-infrared (NIR) semiconducting single wall carbon nanotubes (SWCNTs). Phenylboronic acid (PBA)-based quantum defects incorporated into to interact selectively catechol moieties. These PBA-SWCNTs further...

10.1021/acs.nanolett.3c05082 article EN Nano Letters 2024-02-12

We developed a family of genetically encoded serotonin (5-HT) sensors (sDarken) on the basis native 5-HT1A receptor and circularly permuted GFP. sDarken 5-HT are bright in unbound state diminish their fluorescence upon binding 5-HT. Sensor variants with different affinities for were engineered to increase versatility imaging dynamics. Experiments vitro vivo showed feasibility dynamics high temporal spatial resolution. As demonstrated here, designed show excellent membrane expression, have...

10.1038/s41467-022-35200-w article EN cc-by Nature Communications 2022-12-06

Neural glutamate homeostasis plays a key role in health and disease. In ischemic conditions, such as stroke, this is severely disrupted since energy depletion ion imbalances lead to more release less uptake. We here used the fluorescent sensor SF iGluSnFR(A184V) probe effects of chemical ischemia on extracellular dynamics situ, using organotypic slice cultures from mouse cortex. iGluSnFR imaging reported spontaneous events, which indicate synchronous network activity, similar calcium signals...

10.1101/2025.02.05.636645 preprint EN bioRxiv (Cold Spring Harbor Laboratory) 2025-02-06

NMDA receptors are important players for neuronal differentiation. We previously reported that antagonizing with APV blocked the growth-promoting effects evoked by overexpression of specific calcium-permeable or flip-spliced AMPA receptor subunits and type I transmembrane regulatory proteins which both exclusively modify apical dendritic length branching cortical pyramidal neurons. These findings led us to characterize role GluN2B GluN2A dendritogenesis using organotypic cultures rat visual...

10.3389/fnana.2020.571351 article EN cc-by Frontiers in Neuroanatomy 2020-11-13

Abstract Genetically encoded calcium (Ca 2+ ) indicators (GECIs) are widely used for imaging neuronal activity, yet current limitations of existing red fluorescent GECIs have constrained their applicability. The inherently dim fluorescence and low signal-to-noise ratio red-shifted posed significant challenges. More critically, several red-fluorescent exhibit photoswitching when exposed to blue light, thereby limiting applicability in all-optical experimental approaches. Here, we present the...

10.1101/2024.12.16.628673 preprint EN cc-by-nc-nd bioRxiv (Cold Spring Harbor Laboratory) 2024-12-17

Neurotransmitters are important signaling molecules in the brain and relevant many diseases. Measuring them with high spatial temporal resolution biological systems is challenging. Here, we develop a ratiometric fluorescent sensor/probe for catecholamine neurotransmitters based on near-infrared (NIR) semiconducting single wall carbon nanotubes (SWCNTs). Phenylboronic acid (PBA)-based quantum defects incorporated into to interact selectively catechol moieties. These PBA-SWCNTs further...

10.26434/chemrxiv-2023-rp320 preprint EN cc-by-nc-nd 2023-12-26

Abstract We developed a new family of genetically encoded serotonin (5-HT) sensors ( sDarken ) on the basis native 5-HT 1A receptor and circularly permuted GFP. are bright in unbound state diminish their fluorescence upon binding 5-HT. Sensor variants with different affinities for were engineered to increase versatility imaging dynamics. Experiments vitro vivo showed feasibility dynamics high temporal spatial resolution. As demonstrated here, designed excellent membrane expression, have...

10.1101/2022.03.10.483799 preprint EN bioRxiv (Cold Spring Harbor Laboratory) 2022-03-13
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