Vivek Srinivas

ORCID: 0000-0002-0265-1873
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Research Areas
  • Metal-Catalyzed Oxygenation Mechanisms
  • Enzyme Structure and Function
  • Mycobacterium research and diagnosis
  • Antibiotic Resistance in Bacteria
  • Tuberculosis Research and Epidemiology
  • Bacterial Genetics and Biotechnology
  • Photosynthetic Processes and Mechanisms
  • Porphyrin Metabolism and Disorders
  • Microbial metabolism and enzyme function
  • Advanced Electron Microscopy Techniques and Applications
  • Atmospheric and Environmental Gas Dynamics
  • Advanced Queuing Theory Analysis
  • Metal complexes synthesis and properties
  • Synthesis and Biological Evaluation
  • Virus-based gene therapy research
  • Bacteriophages and microbial interactions
  • Insect symbiosis and bacterial influences
  • Parasitic Infections and Diagnostics
  • Protein purification and stability
  • Studies on Chitinases and Chitosanases
  • Iron Metabolism and Disorders
  • Synthesis and biological activity
  • Antimicrobial Resistance in Staphylococcus
  • Animal Virus Infections Studies
  • Probability and Risk Models

Stockholm University
2014-2025

Rajiv Gandhi University of Health Sciences
2020-2024

GITAM University
2024

Institute for Systems Biology
2018-2022

North Seattle College
2020

Seattle University
2020

InSysBio (Russia)
2018-2019

Bangalore University
1992-2016

Indian Veterinary Research Institute
2016

Indian Institute of Technology Bombay
2015

Soluble methane monooxygenase (sMMO) is a multicomponent metalloenzyme that catalyzes the conversion of to methanol at ambient temperature using nonheme, oxygen-bridged dinuclear iron cluster in active site. Structural changes hydroxylase component (sMMOH) containing diiron caused by complex formation with regulatory (MMOB) and reduction are important for regulation O

10.1021/jacs.0c05613 article EN Journal of the American Chemical Society 2020-07-20

Aerobic ribonucleotide reductases (RNRs) initiate synthesis of DNA building blocks by generating a free radical within the R2 subunit; is subsequently shuttled to catalytic R1 subunit through proton-coupled electron transfer (PCET). We present high-resolution room temperature structure class Ie protein captured x-ray laser serial femtosecond crystallography. The reveals conformational reorganization shield and connect it translocation path, with structural changes propagating surface where...

10.1126/science.adh8160 article EN Science 2023-10-06

Background: Joint ill is a septicemic polyarthritis condition due to the localization of pathogenic bacteria within joints young calves. The emergence antibiotic resistant pathogen in such cases may lead further complication treatment. Thus, present study was aimed isolate and identify bacterial pathogens its antimicrobial genes from joint Methods: A total 31 pus swabs were collected calves subjected for isolation identification by phenotypic genotypic method followed determination (tet mecA...

10.18805/ijar.b-5429 article EN cc-by Indian Journal of Animal Research 2025-01-17

Abstract Class I ribonucleotide reductases (RNRs) convert ribonucleotides into deoxyribonucleotides under oxic conditions. The R2 subunit provides a radical required for catalysis conducted by the R1 subunit. In most R2s is generated on tyrosine via oxidation an adjacent metal site. discovery of metal-free defined new RNR subclass Ie. R2e, three otherwise strictly conserved metal-binding glutamates in active site are substituted. Two variants have been found, VPK and QSK. To date, version...

10.1038/s42003-025-07565-3 article EN cc-by Communications Biology 2025-02-22

Understanding the structure of an active pharmaceutical ingredient is essential for gaining insights into its physicochemical properties. Sodium valproate, one most effective antiepileptic drugs, was first approved medical use in 1967. However, anhydrous form has remained unresolved. This because it difficult to grow crystals sufficient size single-crystal X-ray diffraction (SCXRD). Although 3D electron (3D ED) can be used studying too small SCXRD, sodium valproate are extremely sensitive...

10.26434/chemrxiv-2025-8qxqp preprint EN 2025-04-04

Mycobacterium tuberculosis (MTB) displays the remarkable ability to transition in and out of dormancy, a hallmark pathogen's capacity evade immune system exploit susceptible individuals. Uncovering gene regulatory programs that underlie phenotypic shifts MTB during disease latency reactivation has posed challenge. We develop an experimental precisely control dissolved oxygen levels cultures order capture transcriptional events unfold as transitions into hypoxia-induced dormancy. Using...

10.1016/j.celrep.2020.107577 article EN cc-by-nc-nd Cell Reports 2020-04-01

Aim: The present study was conducted to isolate and characterize canine parvovirus circulating in Southern India by genetic analysis of VP2 capsid protein gene. Materials Methods:In this study, 128 samples were collected from nine different locations covering five Indian states (Pondicherry, Tamil Nadu, Kerala, Andhra Pradesh Karnataka) .Out samples, 69 found be positive PCR assay.Out 36 randomly selected processed for virus isolation.Twenty viruses could isolated successfully 18 subjected...

10.14202/vetworld.2013.744-749 article EN cc-by Veterinary World 2013-08-13

The present study was conducted to determine the zoonotic importance of methicillin resistant staphylococci associated with bovine mastitis and their potential role in transmission animal handlers.

10.14202/vetworld.2014.422-427 article EN cc-by Veterinary World 2014-06-01

Upstream open reading frames (uORFs) and upstream AUGs (uAUGs) can regulate the translation of downstream ORFs. The AT rich genome Plasmodium falciparum, due to higher content start stop codons, has potential give rise a large number uORFs uAUGs that may affect expression their flanking A bioinformatics approach was used detect uATGs associated with different genes in parasite. To study effect some these on ORF, promoters 5′ leaders containing were cloned luciferase reporter gene. Luciferase...

10.1186/s12936-015-1040-5 article EN cc-by Malaria Journal 2015-12-01

Maximum likelihood and uniform minimum variance unbiased estimators of steady-state probability distribution system size, at least ℓ customers in the steady state, certain measures effectiveness M/M/1 queue are obtained/derived based on observations X, number customer arrivals during a service time. The compared using Asympotic Expected Deficiency (AED) criterion leading to recommendation over maximum for some measures.

10.1080/03610926.2010.498653 article EN Communication in Statistics- Theory and Methods 2011-07-09

Antibody-recruiting protein-catalyzed capture agent (AR-PCCs) are a new class of all-synthetic and highly targeted antibiotics that recruit endogenous immune responses to eliminate drug-resistant microbes.

10.1039/c9sc04842a article EN cc-by-nc Chemical Science 2020-01-01

Mycobacterium tuberculosis (MTB) persists and survives antibiotic treatments by generating phenotypically heterogeneous drug-tolerant subpopulations. The surviving cells, persisters, are a major barrier to the relapse-free treatment of (TB), which is already killing >1.8 million people every year becoming deadlier with emergence multidrug-resistant strains.

10.1128/msystems.01127-20 article EN cc-by mSystems 2020-12-01

Redox reactions are central to biochemistry and both controlled by induce protein structural changes. Here, we describe rearrangements crosstalk within the Bacillus cereus ribonucleotide reductase R2b-NrdI complex, a di-metal carboxylate-flavoprotein system, as part of mechanism generating essential catalytic free radical enzyme. Femtosecond crystallography at an X-ray electron laser was utilized obtain structures room temperature in defined redox states without suffering photoreduction....

10.7554/elife.79226 article EN cc-by eLife 2022-09-09

In the imbedded Markov chain (IMC) analysis of M/G/1 queuing system, X1, X2, …, Xn, … form a sequence i.i.d random variables. where Xn denotes number customer arrivals during service time customer. M/D/1 queue, distribution common variable X is Poisson with mean ρ, traffic intensity. This fact utilized for maximum likelihood (ML) and uniformly minimum variance unbiased (UMVU) estimation intensity, performance measures, transition probabilities IMC, correlation functions departure process,...

10.1080/03610926.2014.950750 article EN Communication in Statistics- Theory and Methods 2016-01-25

There is an urgent need for strategies to discover secondary drugs prevent or disrupt antimicrobial resistance (AMR), which causing >700,000 deaths annually. Here, we demonstrate that tetracycline-resistant (Tet

10.1128/msystems.00904-22 article EN cc-by mSystems 2022-12-20

Aim: The present study was conducted to determine the prevalence of antibodies against leptospira using a genus specific and serovar antigen by indirect ELISA (iELISA) Microscopic Agglutination test (MAT), respectively.Materials Methods: 300 sera samples were collected from dogs, Pondicherry, suspected be suffering Canine leptospirosis with no history vaccination.Using outer membrane proteins (OMP's) Leptospira interrogans canicola as leptospiral detected iELISA compared MAT five commonly...

10.14202/vetworld.2013.926-930 article EN cc-by Veterinary World 2013-11-01
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